MGE detailed information
MGE type: Prophage MGE length: 32288 bp
Accession: NZ_CP043937 Location: 2005414..2037701 Organism: Escherichia coli strain RM14516 Replicon: chromosome
Accession: NZ_CP043937 Location: 2005414..2037701 Organism: Escherichia coli strain RM14516 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FS841_RS09635 () | 2000854..2002227 | + | 1374 | WP_001309553.1 | MFS transporter | - |
| FS841_RS09640 () | 2002273..2003154 | - | 882 | WP_097742330.1 | protease HtpX | - |
| FS841_RS09645 () | 2003346..2005394 | - | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| FS841_RS09650 () | 2005414..2006112 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| FS841_RS09655 () | 2006209..2006706 | - | 498 | WP_001033105.1 | L-methionine (R)-S-oxide reductase | - |
| FS841_RS09660 () | 2006836..2008119 | + | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| FS841_RS09665 () | 2008088..2010721 | + | 2634 | WP_001306757.1 | lipid-binding membrane homeostasis protein YebT | - |
| FS841_RS09670 () | 2010801..2012240 | + | 1440 | Protein_1895 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| FS841_RS09675 () | 2012358..2012594 | + | 237 | WP_001295499.1 | YebV family protein | - |
| FS841_RS09680 () | 2012699..2012890 | + | 192 | WP_001296140.1 | YebW family protein | - |
| FS841_RS09685 () | 2012891..2013547 | - | 657 | WP_000812712.1 | protein-serine/threonine phosphatase | - |
| - | 2013644..2013915 | + | 272 | - | - | Antitoxin Detail |
| - | 2013682..2013785 | - | 104 | - | - | Toxin Detail |
| FS841_RS09690 () | 2013943..2014284 | - | 342 | WP_000976481.1 | YebY family protein | - |
| FS841_RS09695 () | 2014297..2015169 | - | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| FS841_RS09700 () | 2015173..2015547 | - | 375 | WP_000168743.1 | CopC domain-containing protein YobA | - |
| FS841_RS09705 () | 2015686..2015916 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| FS841_RS09710 () | 2016018..2016674 | + | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein YobB | - |
| FS841_RS09715 () | 2016698..2017360 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| FS841_RS09720 () | 2017357..2019417 | - | 2061 | WP_000936962.1 | oligopeptidase B | - |
| FS841_RS09725 () | 2019573..2019998 | - | 426 | WP_000064873.1 | IS200/IS605-like element ISEc46 family transposase | - |
| FS841_RS09730 () | 2020055..2021224 | + | 1170 | WP_000942660.1 | RNA-guided endonuclease TnpB family protein | - |
| FS841_RS09735 () | 2021388..2022047 | - | 660 | WP_000024735.1 | tellurite resistance TerB family protein | - |
| FS841_RS09740 () | 2022374..2022730 | - | 357 | WP_001295500.1 | protein YebF | - |
| FS841_RS09745 () | 2022797..2023087 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| FS841_RS09750 () | 2023221..2024399 | + | 1179 | WP_000173461.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| FS841_RS09755 () | 2024454..2025095 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| FS841_RS09760 () | 2025132..2026943 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| FS841_RS09765 () | 2027178..2028653 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| FS841_RS09770 () | 2028991..2029860 | + | 870 | WP_097742329.1 | DNA-binding transcriptional regulator HexR | - |
| FS841_RS09775 () | 2029988..2031430 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| FS841_RS09780 () | 2031562..2032533 | - | 972 | WP_000448381.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| FS841_RS09785 () | 2032653..2033975 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| FS841_RS09790 () | 2033991..2034923 | - | 933 | WP_001376899.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| FS841_RS09795 () | 2035002..2035757 | + | 756 | WP_000202988.1 | zinc ABC transporter ATP-binding protein ZnuC | - |
| FS841_RS09800 () | 2035754..2036539 | + | 786 | WP_000571478.1 | zinc ABC transporter permease subunit ZnuB | - |
| FS841_RS09805 () | 2036691..2037701 | - | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| FS841_RS09810 () | 2037710..2038321 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| FS841_RS09815 () | 2038460..2038525 | - | 66 | WP_072123646.1 | stress response small protein YobI | - |
| FS841_RS09820 () | 2038596..2039198 | + | 603 | WP_001024936.1 | YebB family permuted papain-like enzyme | - |
| FS841_RS09825 () | 2039200..2039721 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| FS841_RS09830 () | 2039756..2040496 | - | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| FS841_RS09835 () | 2040525..2040977 | - | 453 | WP_076611058.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|