MGE detailed information
MGE type: Genomic_island MGE length: 32661 bp
Accession: NZ_CP043825 Location: 4819929..4852589 Organism: Escherichia coli strain RM8082 Replicon: chromosome
Accession: NZ_CP043825 Location: 4819929..4852589 Organism: Escherichia coli strain RM8082 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1745_RS23845 (4815345) | 4815345..4816685 | - | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
| F1745_RS23850 (4817256) | 4817256..4817975 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| F1745_RS23855 (4817972) | 4817972..4819603 | - | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| F1745_RS23860 (4819732) | 4819732..4820483 | - | 752 | Protein_4660 | IS3 family transposase | - |
| F1745_RS23865 (4821029) | 4821029..4821457 | + | 429 | WP_238013779.1 | hypothetical protein | - |
| F1745_RS23870 (4821496) | 4821496..4822716 | + | 1221 | WP_032141676.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| F1745_RS23875 (4822709) | 4822709..4823233 | + | 525 | WP_265414587.1 | cysteine peptidase family C39 domain-containing protein | - |
| F1745_RS23880 (4823384) | 4823384..4824871 | + | 1488 | WP_265414591.1 | ABC transporter transmembrane domain-containing protein | - |
| F1745_RS23885 (4825001) | 4825001..4825731 | - | 731 | Protein_4665 | IS3 family transposase ISKpn1 | Transposase |
| F1745_RS23890 (4825811) | 4825811..4826329 | - | 519 | WP_003582778.1 | fimbrial family protein | - |
| F1745_RS23895 (4826322) | 4826322..4826843 | - | 522 | WP_001542589.1 | hypothetical protein | VF |
| F1745_RS23900 (4826857) | 4826857..4827852 | - | 996 | WP_032142086.1 | fimbrial protein | - |
| F1745_RS23905 (4827872) | 4827872..4828573 | - | 702 | WP_032141678.1 | hypothetical protein | VF |
| F1745_RS23910 (4828566) | 4828566..4830923 | - | 2358 | WP_032141679.1 | hypothetical protein | VF |
| F1745_RS23915 (4830994) | 4830994..4831515 | - | 522 | WP_032141680.1 | hypothetical protein | VF |
| F1745_RS23920 (4831865) | 4831865..4835701 | + | 3837 | WP_032141681.1 | hypothetical protein | VF |
| F1745_RS23925 (4836608) | 4836608..4837437 | + | 830 | Protein_4673 | HTH-type transcriptional activator RhaR | VF |
| F1745_RS23930 (4838598) | 4838598..4842527 | + | 3930 | WP_001542592.1 | hypothetical protein | VF |
| F1745_RS23935 (4842740) | 4842740..4843012 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| F1745_RS23940 (4843239) | 4843239..4843535 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| F1745_RS23945 (4843563) | 4843563..4843736 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| F1745_RS23950 (4843855) | 4843855..4845372 | - | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| F1745_RS23955 (4845609) | 4845609..4847066 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| F1745_RS23960 (4847125) | 4847125..4849272 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| F1745_RS23965 (4849352) | 4849352..4850686 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| F1745_RS23970 (4851051) | 4851051..4852589 | - | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| F1745_RS23980 (4853388) | 4853388..4853963 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| F1745_RS23985 (4854000) | 4854000..4855697 | - | 1698 | WP_032141682.1 | protein-disulfide reductase DsbD | - |
| F1745_RS23990 (4855673) | 4855673..4856011 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| F1745_RS23995 (4856127) | 4856127..4857428 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|