MGE detailed information
MGE type: Prophage MGE length: 22389 bp
Accession: NZ_CP043821 Location: 2104901..2127289 Organism: Escherichia coli strain RM10740 Replicon: chromosome
Accession: NZ_CP043821 Location: 2104901..2127289 Organism: Escherichia coli strain RM10740 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1748_RS10365 () | 2100756..2101556 | + | 801 | WP_000406929.1 | PTS mannose transporter subunit IIC | - |
| F1748_RS10370 () | 2101569..2102420 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| F1748_RS10375 () | 2102475..2102933 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| F1748_RS26555 () | 2103244..2103366 | + | 123 | WP_000547919.1 | hypothetical protein | - |
| F1748_RS10380 () | 2103363..2103929 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| F1748_RS10385 () | 2103926..2104735 | - | 810 | WP_000010117.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| F1748_RS10390 () | 2104901..2105110 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| F1748_RS10395 () | 2105123..2105266 | - | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| F1748_RS10400 () | 2105936..2106223 | - | 288 | WP_001006866.1 | YebO family protein | - |
| F1748_RS10405 () | 2106298..2106441 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| F1748_RS10410 () | 2106600..2106839 | + | 240 | WP_001211011.1 | YobH family protein | - |
| F1748_RS10415 () | 2106982..2107773 | - | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| F1748_RS10420 () | 2107950..2109323 | + | 1374 | WP_001127216.1 | MFS transporter | - |
| F1748_RS10425 () | 2109369..2110250 | - | 882 | WP_000984517.1 | protease HtpX | - |
| F1748_RS10430 () | 2110442..2112490 | - | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| F1748_RS10435 () | 2112510..2113208 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| F1748_RS10440 () | 2113305..2113802 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| F1748_RS10445 () | 2113932..2115215 | + | 1284 | WP_001301337.1 | membrane integrity lipid transport subunit YebS | - |
| F1748_RS10450 () | 2115184..2117817 | + | 2634 | WP_001297532.1 | hypothetical protein | VF |
| F1748_RS10455 () | 2117897..2119335 | + | 1439 | Protein_2045 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| F1748_RS10460 () | 2119453..2119689 | + | 237 | WP_001295499.1 | YebV family protein | - |
| F1748_RS10465 () | 2119794..2119985 | + | 192 | WP_001296140.1 | YebW family protein | - |
| F1748_RS10475 () | 2120775..2121419 | - | 645 | WP_089515817.1 | protein-serine/threonine phosphatase | - |
| - | 2121516..2121787 | + | 272 | - | - | Antitoxin Detail |
| - | 2121554..2121657 | - | 104 | - | - | Toxin Detail |
| F1748_RS10480 () | 2121815..2122156 | - | 342 | WP_000976492.1 | YebY family protein | - |
| F1748_RS10485 () | 2122169..2123041 | - | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| F1748_RS10490 () | 2123045..2123419 | - | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| F1748_RS10495 () | 2123558..2123788 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| F1748_RS10500 () | 2123890..2124546 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| F1748_RS10505 () | 2124570..2125232 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| F1748_RS10510 () | 2125229..2127289 | - | 2061 | WP_000936951.1 | oligopeptidase B | - |
| F1748_RS10515 () | 2127498..2128157 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| F1748_RS10520 () | 2128484..2128840 | - | 357 | WP_001295500.1 | protein YebF | - |
| F1748_RS10525 () | 2128907..2129197 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| F1748_RS10530 () | 2129331..2130509 | + | 1179 | WP_028985420.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| F1748_RS10535 () | 2130565..2131206 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|