MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 86177 bp
Accession: NZ_CP043288 Location: 1..86177 Organism: Escherichia coli strain WCHEC025985 Replicon: plasmid p1_025985
Accession: NZ_CP043288 Location: 1..86177 Organism: Escherichia coli strain WCHEC025985 Replicon: plasmid p1_025985
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYK42_RS24985 (FYK42_25315) | 1..861 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| FYK42_RS24990 (FYK42_25325) | 1419..2615 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| FYK42_RS24995 (FYK42_25330) | 2632..3633 | + | 1002 | WP_000038866.1 | ParB family protein | - |
| FYK42_RS25000 (FYK42_25335) | 3859..5565 | + | 1707 | WP_000067710.1 | hypothetical protein | - |
| FYK42_RS25005 (FYK42_25340) | 5626..7215 | + | 1590 | WP_072661245.1 | hypothetical protein | - |
| FYK42_RS25010 (FYK42_25345) | 7225..8040 | + | 816 | WP_053287801.1 | hypothetical protein | - |
| FYK42_RS25015 (FYK42_25350) | 8076..8657 | + | 582 | WP_000035301.1 | hypothetical protein | - |
| FYK42_RS25020 (FYK42_25355) | 8669..9178 | + | 510 | WP_000509939.1 | hypothetical protein | - |
| FYK42_RS25025 (FYK42_25370) | 10189..10893 | - | 705 | WP_001697750.1 | DUF3800 domain-containing protein | - |
| FYK42_RS25030 (FYK42_25375) | 11062..11907 | - | 846 | WP_033561729.1 | helix-turn-helix domain-containing protein | - |
| FYK42_RS25035 (FYK42_25380) | 11937..12737 | - | 801 | WP_072661244.1 | phage antirepressor KilAC domain-containing protein | - |
| FYK42_RS25040 (FYK42_25385) | 12901..13938 | - | 1038 | WP_061356656.1 | phage antirepressor KilAC domain-containing protein | - |
| FYK42_RS25045 (FYK42_25390) | 13935..14156 | - | 222 | WP_072033176.1 | host cell division inhibitor Icd-like protein | - |
| FYK42_RS25050 (FYK42_25400) | 14779..15291 | + | 513 | WP_000039791.1 | hypothetical protein | - |
| FYK42_RS25055 (FYK42_25405) | 15295..15834 | + | 540 | WP_072661242.1 | DUF5384 family protein | - |
| FYK42_RS25060 (FYK42_25410) | 15915..16481 | + | 567 | WP_000188920.1 | hypothetical protein | - |
| FYK42_RS25065 (FYK42_25415) | 16492..17103 | + | 612 | WP_000523980.1 | hypothetical protein | - |
| FYK42_RS25070 (FYK42_25420) | 17118..17999 | + | 882 | WP_072661241.1 | morphogenetic protein | - |
| FYK42_RS25075 (FYK42_25425) | 18081..21473 | + | 3393 | WP_072833027.1 | transglycosylase SLT domain-containing protein | - |
| FYK42_RS25080 (FYK42_25430) | 21473..21829 | + | 357 | WP_000002800.1 | hypothetical protein | - |
| FYK42_RS25085 (FYK42_25435) | 21826..23259 | + | 1434 | WP_000047923.1 | bleomycin hydrolase | - |
| FYK42_RS25090 (FYK42_25440) | 23259..24095 | + | 837 | WP_001189832.1 | hypothetical protein | - |
| FYK42_RS25095 (FYK42_25445) | 24174..24608 | + | 435 | WP_001286325.1 | hypothetical protein | - |
| FYK42_RS25100 | 24620..26788 | + | 2169 | Protein_23 | tail fiber protein | - |
| FYK42_RS25105 (FYK42_25470) | 27073..27675 | + | 603 | WP_072649222.1 | tail fiber assembly protein | - |
| FYK42_RS25110 (FYK42_25475) | 27647..28087 | - | 441 | WP_072649223.1 | tail fiber assembly protein | - |
| FYK42_RS25115 (FYK42_25485) | 28516..29088 | + | 573 | WP_046598022.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| FYK42_RS25120 (FYK42_25490) | 29220..29348 | - | 129 | Protein_27 | DNA-invertase | - |
| FYK42_RS25125 (FYK42_25495) | 29548..29787 | + | 240 | WP_072258887.1 | phage holin family protein | - |
| FYK42_RS25130 (FYK42_25500) | 29862..30191 | + | 330 | WP_000887652.1 | phage holin family protein | - |
| FYK42_RS25135 (FYK42_25505) | 30188..30631 | + | 444 | WP_000580770.1 | hypothetical protein | - |
| FYK42_RS25140 (FYK42_25510) | 30618..31220 | + | 603 | WP_072649194.1 | odaE | - |
| FYK42_RS25145 (FYK42_25515) | 31222..33141 | + | 1920 | WP_241408136.1 | hypothetical protein | - |
| FYK42_RS25150 (FYK42_25520) | 33138..33503 | + | 366 | WP_072649192.1 | ddrA | - |
| FYK42_RS25155 (FYK42_25525) | 33543..34751 | - | 1209 | WP_241408137.1 | IS200-IS605 family transposase IS609 | Transposase |
| FYK42_RS25160 (FYK42_25530) | 34851..37838 | + | 2988 | WP_072649190.1 | hypothetical protein | - |
| FYK42_RS25165 (FYK42_25535) | 37828..38139 | + | 312 | WP_001165933.1 | hypothetical protein | - |
| FYK42_RS25170 (FYK42_25540) | 38169..38951 | - | 783 | WP_000432104.1 | hypothetical protein | - |
| FYK42_RS25175 (FYK42_25545) | 38958..39635 | - | 678 | WP_072649189.1 | DUF2829 domain-containing protein | - |
| FYK42_RS25180 (FYK42_25550) | 39833..40321 | - | 489 | WP_000068865.1 | single-stranded DNA-binding protein | - |
| FYK42_RS25185 (FYK42_25555) | 40491..41048 | + | 558 | WP_001345478.1 | lysozyme | - |
| FYK42_RS25190 (FYK42_25565) | 41340..42359 | - | 1020 | WP_000132942.1 | head processing protein | - |
| FYK42_RS25195 (FYK42_25570) | 42352..44061 | - | 1710 | WP_000774702.1 | hypothetical protein | - |
| FYK42_RS25200 (FYK42_25575) | 44137..50904 | + | 6768 | WP_241408129.1 | N-6 DNA methylase | - |
| FYK42_RS25205 (FYK42_25580) | 50938..51378 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| FYK42_RS25210 (FYK42_25585) | 51375..51623 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| FYK42_RS25215 (FYK42_25590) | 51670..52977 | - | 1308 | WP_241408130.1 | SIR2 family protein | - |
| FYK42_RS25220 (FYK42_25595) | 53034..53675 | - | 642 | WP_023156639.1 | hypothetical protein | - |
| FYK42_RS25225 (FYK42_25600) | 53865..54425 | - | 561 | WP_023356281.1 | Ref family protein | - |
| FYK42_RS25230 (FYK42_25605) | 54672..54983 | - | 312 | WP_073278830.1 | lysogeny establishment protein | - |
| FYK42_RS25235 (FYK42_25610) | 55034..56065 | - | 1032 | WP_029393497.1 | site-specific integrase | - |
| FYK42_RS25240 (FYK42_25615) | 56073..56294 | - | 222 | WP_042630942.1 | hypothetical protein | - |
| FYK42_RS25245 (FYK42_25630) | 56899..57108 | + | 210 | WP_000874154.1 | hypothetical protein | - |
| FYK42_RS25250 (FYK42_25635) | 57219..58070 | + | 852 | WP_000611657.1 | phage repressor protein C1 | - |
| FYK42_RS25255 (FYK42_25640) | 58096..59580 | - | 1485 | WP_000124150.1 | terminase | - |
| FYK42_RS25260 (FYK42_25645) | 59580..60773 | - | 1194 | WP_106489616.1 | terminase | - |
| FYK42_RS25265 (FYK42_25650) | 60860..61312 | - | 453 | WP_001326849.1 | late promoter-activating protein | - |
| FYK42_RS25270 (FYK42_25655) | 61401..62444 | - | 1044 | WP_241408131.1 | DUF968 domain-containing protein | - |
| FYK42_RS25275 (FYK42_25660) | 62472..62651 | - | 180 | WP_000113019.1 | hypothetical protein | - |
| FYK42_RS25280 (FYK42_25665) | 62656..63036 | - | 381 | WP_001216045.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| FYK42_RS25285 (FYK42_25670) | 63036..63257 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| FYK42_RS25290 (FYK42_25675) | 63330..63719 | - | 390 | WP_000506726.1 | S24 family peptidase | - |
| FYK42_RS25295 (FYK42_25680) | 63843..64094 | - | 252 | WP_032153798.1 | DNA polymerase III subunit theta | - |
| FYK42_RS25300 (FYK42_25685) | 64097..64363 | - | 267 | WP_000903204.1 | hypothetical protein | - |
| FYK42_RS25305 (FYK42_25690) | 64409..65182 | - | 774 | WP_223677252.1 | hypothetical protein | - |
| FYK42_RS25310 (FYK42_25695) | 65164..65538 | - | 375 | WP_032353387.1 | hypothetical protein | - |
| FYK42_RS25315 (FYK42_25700) | 65545..65838 | - | 294 | WP_000269001.1 | hypothetical protein | - |
| FYK42_RS25320 (FYK42_25705) | 66017..66250 | - | 234 | WP_000517421.1 | hypothetical protein | - |
| FYK42_RS25325 (FYK42_25715) | 66333..67019 | - | 687 | WP_234287463.1 | DUF550 domain-containing protein | - |
| FYK42_RS25330 | 66993..67118 | - | 126 | Protein_69 | DUF550 domain-containing protein | - |
| FYK42_RS25335 (FYK42_25720) | 67115..67324 | - | 210 | WP_153061224.1 | hypothetical protein | - |
| FYK42_RS25340 (FYK42_25725) | 67326..67721 | - | 396 | WP_241408132.1 | hypothetical protein | - |
| FYK42_RS25345 (FYK42_25735) | 68055..68233 | - | 179 | Protein_72 | hypothetical protein | - |
| FYK42_RS25350 (FYK42_25740) | 68235..68423 | - | 189 | WP_000797279.1 | hypothetical protein | - |
| FYK42_RS25355 (FYK42_25745) | 68596..69084 | - | 489 | WP_023146894.1 | ead/Ea22-like family protein | - |
| FYK42_RS25360 (FYK42_25750) | 69081..69320 | - | 240 | WP_072649182.1 | hypothetical protein | - |
| FYK42_RS25365 (FYK42_25755) | 69313..69504 | - | 192 | WP_241408133.1 | hypothetical protein | - |
| FYK42_RS25370 (FYK42_25760) | 69492..69878 | - | 387 | Protein_77 | hypothetical protein | - |
| FYK42_RS26130 | 69888..70022 | - | 135 | WP_001312275.1 | hypothetical protein | - |
| FYK42_RS25375 (FYK42_25765) | 70073..70579 | - | 507 | WP_241408134.1 | 3'-phosphatase | - |
| FYK42_RS25380 (FYK42_25770) | 70652..71914 | - | 1263 | WP_000107689.1 | hypothetical protein | - |
| FYK42_RS25385 (FYK42_25780) | 72216..72917 | - | 702 | WP_000684868.1 | hypothetical protein | - |
| FYK42_RS25390 (FYK42_25785) | 72914..73591 | - | 678 | WP_001354545.1 | metallophosphoesterase | - |
| FYK42_RS25395 (FYK42_25790) | 73588..74040 | - | 453 | WP_241408135.1 | hypothetical protein | - |
| FYK42_RS25400 (FYK42_25795) | 74112..74612 | - | 501 | WP_023153720.1 | hypothetical protein | - |
| FYK42_RS25405 (FYK42_25800) | 74716..74871 | - | 156 | WP_000096174.1 | hypothetical protein | - |
| FYK42_RS25410 (FYK42_25805) | 74938..75516 | - | 579 | WP_000943607.1 | VRR-NUC domain-containing protein | - |
| FYK42_RS25415 (FYK42_25810) | 75519..75764 | - | 246 | WP_000840931.1 | hypothetical protein | - |
| FYK42_RS25420 (FYK42_25815) | 76028..76288 | + | 261 | WP_001361632.1 | hypothetical protein | - |
| FYK42_RS25425 (FYK42_25820) | 76298..76861 | + | 564 | Protein_89 | phage tail protein | - |
| FYK42_RS25430 (FYK42_25825) | 76856..77386 | - | 531 | Protein_90 | SPFH domain-containing protein | - |
| FYK42_RS25445 | 79136..79303 | + | 168 | WP_157895434.1 | hypothetical protein | - |
| FYK42_RS25450 (FYK42_25860) | 79362..81950 | - | 2589 | WP_072661249.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| FYK42_RS25455 (FYK42_25865) | 81947..82852 | - | 906 | WP_000472529.1 | recombination-associated protein RdgC | - |
| FYK42_RS25460 (FYK42_25870) | 82845..83129 | - | 285 | WP_001177860.1 | hypothetical protein | - |
| FYK42_RS25465 (FYK42_25880) | 83592..84380 | + | 789 | WP_072661248.1 | hypothetical protein | - |
| FYK42_RS25470 (FYK42_25885) | 84420..84842 | + | 423 | WP_072661246.1 | ppfA | - |
| FYK42_RS26135 | 84877..85008 | + | 132 | WP_001113883.1 | hypothetical protein | - |
| FYK42_RS25475 (FYK42_25890) | 85020..85379 | + | 360 | WP_001281923.1 | Gp49 family protein | - |
| FYK42_RS25480 (FYK42_25895) | 85450..85851 | + | 402 | WP_000458377.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|