MGE detailed information
MGE type: Genomic_island MGE length: 37106 bp
Accession: NZ_CP042903 Location: 4515771..4552876 Organism: Escherichia coli strain CFSAN061761 Replicon: chromosome
Accession: NZ_CP042903 Location: 4515771..4552876 Organism: Escherichia coli strain CFSAN061761 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA899_RS21775 (4511290) | 4511290..4512486 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| CA899_RS21780 (4512771) | 4512771..4513052 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| CA899_RS21785 (4513074) | 4513074..4513859 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| CA899_RS21790 (4513920) | 4513920..4515437 | + | 1518 | WP_001773853.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| CA899_RS21795 (4515461) | 4515461..4515760 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| CA899_RS21800 (4515771) | 4515771..4516346 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| CA899_RS21805 (4516395) | 4516395..4518947 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| CA899_RS21810 (4519056) | 4519056..4519973 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| CA899_RS21815 (4520110) | 4520110..4521015 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| CA899_RS21820 (4521501) | 4521501..4522040 | + | 540 | WP_001332064.1 | maturase | - |
| CA899_RS21825 (4522107) | 4522107..4522589 | + | 483 | WP_001362989.1 | reverse transcriptase domain-containing protein | - |
| CA899_RS21830 (4523139) | 4523139..4524401 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| CA899_RS21835 (4524418) | 4524418..4525473 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator Btr | VF |
| CA899_RS21840 (4525602) | 4525602..4526753 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| CA899_RS21845 (4526798) | 4526798..4527343 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| CA899_RS21850 (4527700) | 4527700..4528044 | - | 345 | WP_001773854.1 | Transposon Tn10 TetD protein | VF |
| CA899_RS24335 (4528294) | 4528294..4528686 | - | 393 | WP_224156610.1 | TetR family transcriptional regulator | - |
| CA899_RS21860 (4528786) | 4528786..4529934 | - | 1149 | Protein_4299 | Multidrug resistance protein MexB | VF |
| CA899_RS21865 (4530034) | 4530034..4530294 | + | 261 | Protein_4300 | IS3 family transposase IS2 | Transposase |
| CA899_RS24340 (4530286) | 4530286..4530348 | - | 63 | Protein_4301 | IS3 family transposase IS2 | Transposase |
| CA899_RS24345 (4530477) | 4530477..4530602 | - | 126 | WP_000831909.1 | hypothetical protein | - |
| CA899_RS21875 (4530599) | 4530599..4530832 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| CA899_RS21880 (4530901) | 4530901..4531476 | - | 576 | WP_000991593.1 | hypothetical protein | - |
| CA899_RS21885 (4531823) | 4531823..4532554 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| CA899_RS21890 (4534007) | 4534007..4535230 | - | 1224 | WP_001773856.1 | hypothetical protein | - |
| CA899_RS21895 (4535331) | 4535331..4536215 | + | 885 | WP_001116801.1 | YfjP family GTPase | - |
| CA899_RS21900 (4536418) | 4536418..4537098 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| CA899_RS21905 (4537246) | 4537246..4537923 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| CA899_RS21910 (4537929) | 4537929..4538162 | + | 234 | WP_001278283.1 | DUF905 family protein | - |
| CA899_RS21915 (4538252) | 4538252..4539070 | + | 819 | WP_001773857.1 | DUF932 domain-containing protein | - |
| CA899_RS21920 (4539161) | 4539161..4539646 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| CA899_RS21925 (4539662) | 4539662..4540138 | + | 477 | WP_001186786.1 | RadC family protein | - |
| CA899_RS21930 (4540201) | 4540201..4540422 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| CA899_RS21935 (4540585) | 4540585..4540953 | + | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CA899_RS21940 (4541043) | 4541043..4541417 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| CA899_RS21945 (4541414) | 4541414..4541902 | + | 489 | WP_000777545.1 | DUF5983 family protein | - |
| CA899_RS21950 (4541914) | 4541914..4542111 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| CA899_RS21955 (4542208) | 4542208..4542777 | + | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| CA899_RS21960 (4543526) | 4543526..4545064 | + | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CA899_RS21965 (4545429) | 4545429..4546763 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CA899_RS21970 (4546843) | 4546843..4548990 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CA899_RS21975 (4549049) | 4549049..4550506 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| CA899_RS21980 (4550743) | 4550743..4552260 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| CA899_RS21985 (4552379) | 4552379..4552552 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CA899_RS21990 (4552580) | 4552580..4552876 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CA899_RS21995 (4553103) | 4553103..4553375 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| CA899_RS22000 (4553387) | 4553387..4553617 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| CA899_RS22005 (4553798) | 4553798..4555429 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| CA899_RS22010 (4555426) | 4555426..4556145 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|