MGE detailed information
MGE type: Prophage MGE length: 24771 bp
Accession: NZ_CP042220 Location: 2251661..2276431 Organism: Dickeya poaceiphila strain NCPPB 569 Replicon: chromosome
Accession: NZ_CP042220 Location: 2251661..2276431 Organism: Dickeya poaceiphila strain NCPPB 569 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Dpoa569_RS09990 () | 2247409..2248404 | + | 996 | WP_042870413.1 | glyceraldehyde-3-phosphate dehydrogenase | - |
| Dpoa569_RS09995 () | 2248573..2249445 | + | 873 | WP_042870410.1 | D-hexose-6-phosphate mutarotase | - |
| Dpoa569_RS10000 () | 2249493..2250344 | - | 852 | WP_042870408.1 | aldo/keto reductase | - |
| Dpoa569_RS10005 () | 2250459..2251208 | - | 750 | WP_146411302.1 | MipA/OmpV family protein | - |
| Dpoa569_RS10010 () | 2251661..2253595 | + | 1935 | WP_042870406.1 | protein kinase YeaG | - |
| Dpoa569_RS10015 () | 2253632..2254906 | + | 1275 | WP_042873899.1 | YeaH/YhbH family protein | - |
| Dpoa569_RS10020 () | 2255263..2255907 | + | 645 | WP_050569438.1 | DNA/RNA non-specific endonuclease | - |
| - () | 2255979..2256060 | + | 82 | - | - | Antitoxin Detail |
| - () | 2255980..2256060 | - | 81 | - | - | Toxin Detail |
| Dpoa569_RS10025 () | 2256236..2256574 | - | 339 | WP_042870402.1 | YebY family protein | - |
| Dpoa569_RS10030 () | 2256824..2257222 | + | 399 | WP_042870401.1 | hypothetical protein | - |
| Dpoa569_RS10035 () | 2257483..2257992 | - | 510 | WP_042870399.1 | non-heme ferritin | - |
| Dpoa569_RS10040 () | 2258269..2259147 | - | 879 | WP_042870397.1 | copper homeostasis membrane protein CopD | - |
| Dpoa569_RS10045 () | 2259151..2259531 | - | 381 | WP_128569710.1 | copper homeostasis periplasmic binding protein CopC | - |
| Dpoa569_RS10050 () | 2259695..2259925 | + | 231 | WP_042870395.1 | DNA polymerase III subunit theta | - |
| Dpoa569_RS10055 () | 2260441..2262492 | - | 2052 | WP_042870393.1 | oligopeptidase B | - |
| Dpoa569_RS10060 () | 2262779..2263957 | + | 1179 | WP_042870392.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| Dpoa569_RS10065 () | 2264035..2264676 | - | 642 | WP_042870389.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| Dpoa569_RS10070 () | 2264829..2266304 | - | 1476 | WP_042870388.1 | glucose-6-phosphate dehydrogenase | - |
| Dpoa569_RS10075 () | 2266670..2267539 | + | 870 | WP_042870385.1 | MurR/RpiR family transcriptional regulator | - |
| Dpoa569_RS10080 () | 2267707..2269149 | + | 1443 | WP_146411310.1 | pyruvate kinase | - |
| Dpoa569_RS10085 () | 2269299..2269730 | - | 432 | WP_042873897.1 | hypothetical protein | - |
| Dpoa569_RS10090 () | 2270153..2271139 | - | 987 | WP_042870380.1 | Lipid A biosynthesis myristoyltransferase | VF |
| Dpoa569_RS10095 () | 2271289..2272707 | - | 1419 | WP_042870378.1 | Murein DD-endopeptidase MepM | VF |
| Dpoa569_RS10100 () | 2272720..2273745 | - | 1026 | WP_042870375.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| Dpoa569_RS10105 () | 2273821..2274579 | + | 759 | WP_042870373.1 | Zinc import ATP-binding protein ZnuC | VF |
| Dpoa569_RS10110 () | 2274576..2275361 | + | 786 | WP_042870371.1 | zinc ABC transporter permease subunit ZnuB | - |
| Dpoa569_RS10115 () | 2275421..2276431 | - | 1011 | WP_042873896.1 | Holliday junction branch migration DNA helicase RuvB | - |
| Dpoa569_RS10120 () | 2276439..2277056 | - | 618 | WP_042870369.1 | Holliday junction branch migration protein RuvA | - |
| Dpoa569_RS10125 () | 2277232..2278263 | - | 1032 | WP_042870367.1 | HoxN/HupN/NixA family nickel/cobalt transporter | - |
| Dpoa569_RS10130 () | 2278559..2279080 | - | 522 | WP_042870363.1 | crossover junction endodeoxyribonuclease RuvC | - |
| Dpoa569_RS10135 () | 2279121..2279864 | - | 744 | WP_042870361.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| Dpoa569_RS10140 () | 2279936..2280385 | - | 450 | WP_042870359.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|