MGE detailed information
MGE type: Prophage MGE length: 25643 bp
Accession: NZ_CP041448 Location: 2433838..2459480 Organism: Escherichia coli strain YPE10 Replicon: chromosome
Accession: NZ_CP041448 Location: 2433838..2459480 Organism: Escherichia coli strain YPE10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNP79_RS12250 () | 2430353..2431099 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| FNP79_RS12255 () | 2431188..2431874 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| FNP79_RS12260 () | 2432051..2432254 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| FNP79_RS12265 () | 2432289..2433749 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| FNP79_RS12270 () | 2433838..2435121 | - | 1284 | Protein_2271 | MHS family MFS transporter YdfJ | - |
| FNP79_RS12275 () | 2435724..2435837 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| FNP79_RS12280 () | 2435906..2436139 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| FNP79_RS12285 () | 2436456..2437046 | + | 591 | WP_000086531.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| FNP79_RS12290 () | 2437144..2437719 | - | 576 | WP_000885634.1 | tail fiber assembly protein | - |
| FNP79_RS25590 () | 2437719..2438402 | - | 684 | Protein_2276 | tail fiber protein | - |
| FNP79_RS12300 () | 2439322..2439840 | - | 519 | WP_151044026.1 | terminase small subunit | - |
| FNP79_RS12305 () | 2440229..2440462 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| FNP79_RS12310 () | 2440520..2440930 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| FNP79_RS12315 () | 2441082..2441255 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| FNP79_RS12320 () | 2441427..2441582 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| FNP79_RS12325 () | 2441662..2441727 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| FNP79_RS12330 () | 2441730..2441918 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| FNP79_RS12335 () | 2441929..2442141 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| FNP79_RS12340 () | 2442504..2443001 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| FNP79_RS12345 () | 2442998..2443531 | - | 534 | WP_001092971.1 | lysozyme | - |
| FNP79_RS12350 () | 2443528..2443839 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| FNP79_RS12355 () | 2443844..2444059 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| FNP79_RS12360 () | 2444813..2445028 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| FNP79_RS12365 () | 2445329..2445541 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| FNP79_RS12370 () | 2445596..2445685 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| FNP79_RS12375 () | 2445963..2446715 | - | 753 | WP_001047135.1 | antitermination protein | - |
| FNP79_RS12380 () | 2446712..2447770 | - | 1059 | WP_064670548.1 | DUF968 domain-containing protein | - |
| FNP79_RS12385 () | 2447772..2448050 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| FNP79_RS12390 () | 2448117..2448368 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| FNP79_RS12395 () | 2448585..2448740 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FNP79_RS12400 () | 2448812..2449099 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FNP79_RS12405 () | 2449099..2449338 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FNP79_RS12410 () | 2449363..2449668 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| FNP79_RS12415 () | 2449871..2450203 | + | 333 | WP_001301033.1 | protein FlxA | - |
| FNP79_RS12420 () | 2450681..2451843 | + | 1163 | WP_089566769.1 | IS3 family transposase ISEc17 | Transposase |
| FNP79_RS12425 () | 2451901..2453214 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| FNP79_RS12435 () | 2453694..2453882 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| FNP79_RS12440 () | 2453879..2454070 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| FNP79_RS12445 () | 2454163..2456634 | + | 2472 | WP_021570798.1 | exonuclease | - |
| FNP79_RS12450 () | 2456707..2456958 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| FNP79_RS12455 () | 2456993..2458273 | + | 1281 | WP_000876986.1 | Putative defective protein IntQ ; Integrase | Integrase |
| FNP79_RS12460 () | 2458275..2458403 | - | 129 | WP_001389342.1 | hypothetical protein | - |
| FNP79_RS12465 () | 2458461..2459480 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| FNP79_RS12470 () | 2459492..2460706 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| FNP79_RS12475 () | 2460912..2461238 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| FNP79_RS12480 () | 2461373..2461714 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| FNP79_RS12485 () | 2461749..2462309 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| FNP79_RS12490 () | 2462312..2463022 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| FNP79_RS12495 () | 2463130..2463435 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|