MGE detailed information
MGE type: Mobilizable plasmid MGE length: 101987 bp
Accession: NZ_CP041443 Location: 1..101987 Organism: Escherichia coli strain YPE12 Replicon: plasmid pYPE12-101k-tetX4
Accession: NZ_CP041443 Location: 1..101987 Organism: Escherichia coli strain YPE12 Replicon: plasmid pYPE12-101k-tetX4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNP80_RS24670 () | 1..1011 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| FNP80_RS24680 () | 1205..2173 | + | 969 | WP_077816224.1 | IS5 family transposase IS903B | Transposase |
| FNP80_RS24685 () | 2340..2756 | - | 417 | WP_033548869.1 | hypothetical protein | - |
| FNP80_RS24690 () | 3341..3676 | + | 336 | WP_001039462.1 | hypothetical protein | - |
| FNP80_RS24695 () | 3685..3876 | + | 192 | WP_001515192.1 | hypothetical protein | - |
| FNP80_RS24700 () | 3887..4470 | - | 584 | Protein_5 | IS1 family transposase IS1X4 | Transposase |
| FNP80_RS24705 () | 5004..5759 | + | 756 | WP_000807690.1 | replication initiation protein RepE | - |
| FNP80_RS24715 () | 6028..6373 | + | 346 | Protein_7 | IS1 family transposase IS1X4 | Transposase |
| FNP80_RS25505 () | 6884..7024 | + | 141 | WP_160784086.1 | hypothetical protein | - |
| FNP80_RS24740 () | 7119..7823 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| FNP80_RS24745 () | 7877..8134 | + | 258 | Protein_10 | ISKra4 family transposase ISKpn19 | Transposase |
| FNP80_RS24750 () | 8525..9181 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| FNP80_RS24755 () | 9342..10046 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FNP80_RS24765 () | 10100..10633 | + | 534 | Protein_13 | IS6 family transposase IS26 | Transposase |
| FNP80_RS24770 () | 10687..11154 | + | 468 | Protein_14 | conjugal transfer protein | - |
| FNP80_RS24780 () | 11399..11515 | + | 117 | WP_001791010.1 | tetracycline resistance determinant leader peptide | - |
| FNP80_RS24785 () | 11531..13450 | + | 1920 | WP_000691727.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| FNP80_RS24790 () | 13569..13736 | + | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| FNP80_RS25510 () | 13744..13974 | - | 231 | WP_136655701.1 | hypothetical protein | - |
| FNP80_RS24795 () | 13976..14611 | + | 636 | Protein_19 | transposase | - |
| FNP80_RS24805 () | 15032..15526 | + | 495 | WP_077141251.1 | IS91 family transposase ISAzo26 | Transposase |
| FNP80_RS24810 () | 15637..16497 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| FNP80_RS24815 () | 16680..17237 | - | 558 | WP_151140426.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| FNP80_RS24820 () | 17401..20406 | + | 3006 | WP_001531602.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| FNP80_RS24825 () | 20442..21203 | - | 762 | Protein_24 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| FNP80_RS24830 () | 21192..21599 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| FNP80_RS24835 () | 21737..22621 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| FNP80_RS24840 () | 22653..23852 | - | 1200 | WP_001493765.1 | tetracycline efflux MFS transporter Tet(A) | - |
| FNP80_RS24845 () | 23958..24608 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| FNP80_RS24850 () | 24640..24882 | - | 243 | WP_000844627.1 | transposase | - |
| FNP80_RS24855 () | 24940..25440 | - | 501 | Protein_30 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| FNP80_RS24860 () | 25506..26171 | + | 666 | Protein_31 | IS6 family transposase IS15DI | Transposase |
| FNP80_RS24865 () | 26271..26924 | - | 654 | Protein_32 | IS91-like element ISVsa3 family transposase | - |
| FNP80_RS24870 () | 27036..27340 | - | 305 | Protein_33 | LysR family transcriptional regulator | - |
| FNP80_RS24875 () | 27367..28581 | - | 1215 | WP_034167813.1 | Inner membrane transport protein YdhC | ARG |
| FNP80_RS24880 () | 28798..29683 | - | 886 | Protein_35 | DUF3363 domain-containing protein | - |
| FNP80_RS24885 () | 29714..30638 | - | 925 | Protein_36 | IS91 family transposase ISVsa3 | Transposase |
| FNP80_RS24895 () | 31094..31549 | - | 456 | WP_136655511.1 | MarR family transcriptional regulator | - |
| FNP80_RS24900 () | 31772..32401 | + | 630 | WP_136655510.1 | Chloramphenicol acetyltransferase | VF |
| FNP80_RS24905 () | 32449..34062 | - | 1614 | WP_136655509.1 | ATP-binding cassette domain-containing protein | - |
| FNP80_RS24910 () | 34187..34393 | - | 207 | Protein_40 | type VI secretion protein | - |
| FNP80_RS24915 () | 34424..35917 | - | 1494 | WP_015344975.1 | IS91 family transposase ISVsa3 | Transposase |
| FNP80_RS24920 () | 36256..37413 | - | 1158 | WP_094309310.1 | Kynurenine 3-monooxygenase | ARG |
| FNP80_RS24925 () | 37403..38248 | - | 846 | WP_164538741.1 | alpha/beta fold hydrolase | - |
| FNP80_RS25515 () | 38665..38802 | + | 138 | WP_164538590.1 | hypothetical protein | - |
| FNP80_RS24930 () | 38796..38999 | - | 204 | Protein_45 | hypothetical protein | - |
| FNP80_RS24935 () | 39030..39857 | - | 828 | Protein_46 | IS91 family transposase ISVsa3 | Transposase |
| FNP80_RS24940 () | 39937..40641 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| FNP80_RS24945 () | 40694..40786 | - | 93 | Protein_48 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| FNP80_RS24950 () | 40970..41443 | - | 474 | WP_001317507.1 | Dihydrofolate reductase type 1 | ARG |
| FNP80_RS24955 () | 41599..42602 | + | 1004 | Protein_50 | integron integrase | - |
| FNP80_RS24960 () | 42748..43452 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| FNP80_RS24965 () | 43505..43630 | + | 126 | Protein_52 | quaternary ammonium compound efflux SMR transporter QacL | - |
| FNP80_RS24975 () | 43895..44530 | - | 636 | Protein_53 | transposase | - |
| FNP80_RS25520 () | 44532..44807 | + | 276 | WP_109023896.1 | hypothetical protein | - |
| FNP80_RS24980 () | 44810..45601 | - | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| FNP80_RS24985 () | 46070..46315 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| FNP80_RS24990 () | 46353..47216 | - | 864 | WP_054377175.1 | SDR family oxidoreductase | - |
| FNP80_RS24995 () | 47362..48591 | - | 1230 | WP_032492336.1 | Putative bacilysin exporter BacE | ARG |
| FNP80_RS25005 () | 48719..49423 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FNP80_RS25010 () | 49475..49678 | - | 204 | Protein_60 | mercuric resistance transcriptional repressor protein MerD | - |
| FNP80_RS25015 () | 49696..51390 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| FNP80_RS25020 () | 51442..51864 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| FNP80_RS25025 () | 51900..52175 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| FNP80_RS25030 () | 52189..52539 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| FNP80_RS25035 () | 52611..53045 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| FNP80_RS25040 () | 53078..54013 | - | 936 | Protein_66 | Tn3 family transposase TnpA_Tn3 | Transposase |
| FNP80_RS25045 () | 54043..54747 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| FNP80_RS25055 () | 55014..56450 | + | 1437 | WP_000105383.1 | glutathione synthase | - |
| FNP80_RS25060 () | 56785..57482 | + | 698 | Protein_69 | IS1 family transposase | - |
| FNP80_RS25525 () | 57507..57941 | - | 435 | WP_053273090.1 | hypothetical protein | - |
| FNP80_RS25065 () | 57922..58005 | + | 84 | WP_000565612.1 | hypothetical protein | - |
| FNP80_RS25070 () | 58160..58804 | - | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| FNP80_RS25075 () | 59185..59847 | + | 663 | WP_000516402.1 | peptidyl-arginine deiminase | - |
| FNP80_RS25080 () | 59945..60226 | + | 282 | WP_001185482.1 | hypothetical protein | - |
| FNP80_RS25085 () | 60251..61228 | + | 978 | WP_024245156.1 | hypothetical protein | - |
| FNP80_RS25090 () | 61225..61650 | - | 426 | WP_000202942.1 | hypothetical protein | - |
| FNP80_RS25095 () | 61718..62164 | - | 447 | Protein_77 | hypothetical protein | - |
| FNP80_RS25100 () | 62204..63040 | - | 837 | WP_001050931.1 | replication initiation protein | - |
| FNP80_RS25115 () | 64271..64522 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| FNP80_RS25120 () | 64512..64793 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FNP80_RS25125 () | 64868..65565 | + | 698 | Protein_81 | IS1 family transposase | - |
| FNP80_RS25135 () | 65711..65968 | + | 258 | WP_105278499.1 | hypothetical protein | - |
| FNP80_RS25140 () | 66005..66969 | - | 965 | Protein_83 | IS5 family transposase | - |
| FNP80_RS25145 () | 67004..67279 | + | 276 | Protein_84 | peptidoglycan DD-metalloendopeptidase family protein | - |
| FNP80_RS25150 () | 67313..67510 | - | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| FNP80_RS25155 () | 67551..70028 | - | 2478 | WP_001398208.1 | Ag(+)-translocating P-type ATPase SilP | - |
| FNP80_RS25160 () | 70126..70566 | - | 441 | WP_000758229.1 | hypothetical protein | - |
| FNP80_RS25165 () | 70653..73799 | - | 3147 | WP_020219104.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| FNP80_RS25170 () | 73810..75102 | - | 1293 | WP_001381488.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| FNP80_RS25175 () | 75216..75569 | - | 354 | WP_001246155.1 | cation efflux system protein CusF | - |
| FNP80_RS25180 () | 75597..76982 | - | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| FNP80_RS25185 () | 77172..77852 | + | 681 | WP_000697969.1 | Transcriptional regulatory protein CusR | VF |
| FNP80_RS25190 () | 77845..79320 | + | 1476 | WP_000555737.1 | copper/silver sensor histidine kinase SilS | - |
| FNP80_RS25195 () | 79571..80002 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| FNP80_RS25200 () | 80146..80496 | + | 351 | WP_000694953.1 | DUF305 domain-containing protein | - |
| FNP80_RS25205 () | 80884..81792 | - | 909 | Protein_96 | HNH endonuclease | - |
| FNP80_RS25210 () | 82264..83492 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| FNP80_RS25215 () | 83765..84739 | + | 975 | WP_001148756.1 | sensor domain-containing diguanylate cyclase | - |
| FNP80_RS25530 () | 85669..86340 | + | 672 | WP_000796235.1 | hypothetical protein | - |
| FNP80_RS25230 () | 86360..87148 | + | 789 | WP_022631000.1 | site-specific integrase | - |
| FNP80_RS25240 () | 87442..88338 | - | 897 | Protein_101 | IS3 family transposase ISEhe3 | Transposase |
| FNP80_RS25245 () | 88348..89498 | - | 1151 | Protein_102 | IS30 family transposase IS30D | Transposase |
| FNP80_RS25250 () | 89580..89729 | - | 150 | Protein_103 | IS3 family transposase ISEhe3 | Transposase |
| FNP80_RS25255 () | 89876..90157 | + | 282 | WP_000639434.1 | hypothetical protein | - |
| FNP80_RS25260 () | 90258..90956 | - | 699 | Protein_105 | IS1 family transposase | - |
| FNP80_RS25265 () | 91011..92114 | + | 1104 | Protein_106 | pyridine nucleotide-disulfide oxidoreductase | - |
| FNP80_RS25270 () | 92321..93018 | + | 698 | Protein_107 | IS1 family transposase | - |
| FNP80_RS25275 () | 93048..93395 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| FNP80_RS25280 () | 93444..94981 | + | 1538 | Protein_109 | IS66 family transposase ISEc22 | Transposase |
| FNP80_RS25300 () | 96924..97622 | + | 699 | Protein_110 | IS1 family transposase | - |
| FNP80_RS25305 () | 97641..98486 | + | 846 | Protein_111 | IS3 family transposase IS911 | Transposase |
| FNP80_RS25315 () | 99110..100081 | - | 972 | WP_000817038.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| FNP80_RS25320 () | 100081..101247 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|