MGE detailed information
MGE type: Conjugative plasmid MGE length: 79945 bp
Accession: NZ_CP041339 Location: 1..79945 Organism: Escherichia coli strain CCUG 73778 Replicon: plasmid pSUH-2
Accession: NZ_CP041339 Location: 1..79945 Organism: Escherichia coli strain CCUG 73778 Replicon: plasmid pSUH-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FMA85_RS25555 () | 883..2256 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| FMA85_RS25560 () | 2243..2668 | - | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| FMA85_RS25565 () | 2616..2963 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| FMA85_RS25570 () | 2893..3438 | - | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FMA85_RS25575 () | 3425..3709 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FMA85_RS25580 () | 3828..4172 | - | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| FMA85_RS25585 () | 4186..4929 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FMA85_RS25590 () | 4922..5179 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| FMA85_RS25595 () | 5206..7056 | - | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FMA85_RS25600 () | 7053..7691 | - | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FMA85_RS25605 () | 7700..8005 | - | 306 | WP_000224416.1 | hypothetical protein | - |
| FMA85_RS25610 () | 8035..9027 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| FMA85_RS25615 () | 9024..9656 | - | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| FMA85_RS25620 () | 9653..10039 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| FMA85_RS25625 () | 10036..12666 | - | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| FMA85_RS25630 () | 12792..13139 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| FMA85_RS25635 () | 13167..13385 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| FMA85_RS25640 () | 13465..13941 | - | 477 | WP_000549587.1 | hypothetical protein | - |
| FMA85_RS25645 () | 13934..14155 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| FMA85_RS25650 () | 14290..14805 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FMA85_RS25655 () | 14802..15170 | - | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| FMA85_RS25660 () | 15109..15696 | - | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| FMA85_RS25665 () | 15665..17116 | - | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| FMA85_RS25670 () | 17116..17844 | - | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| FMA85_RS25675 () | 17831..18397 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| FMA85_RS25680 () | 18419..18730 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| FMA85_RS25685 () | 18745..19104 | - | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| FMA85_RS25690 () | 19137..19364 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| FMA85_RS25695 () | 19501..20172 | - | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| FMA85_RS25700 () | 20366..20749 | - | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| FMA85_RS25705 () | 21072..21674 | + | 603 | WP_000243713.1 | hypothetical protein | VF |
| FMA85_RS25710 () | 21971..22792 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| FMA85_RS25715 () | 22903..23199 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| FMA85_RS26315 () | 23591..23795 | + | 205 | Protein_34 | pilus protein | - |
| FMA85_RS25725 () | 23880..25493 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| FMA85_RS25730 () | 25524..25874 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| FMA85_RS25735 () | 25871..26296 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| FMA85_RS25740 () | 26654..26812 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 26856..27080 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 26856..27080 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 26856..27080 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 26856..27080 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| FMA85_RS25745 () | 26892..27071 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| FMA85_RS25750 () | 27092..27811 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| FMA85_RS25755 () | 27808..28242 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| FMA85_RS25760 () | 28311..30334 | - | 2024 | Protein_42 | ParB/RepB/Spo0J family partition protein | - |
| FMA85_RS25765 () | 30395..30628 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| FMA85_RS25770 () | 30686..31213 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| FMA85_RS25775 () | 32062..32625 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| FMA85_RS25780 () | 32672..34033 | - | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| FMA85_RS25785 () | 34085..34315 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| FMA85_RS25790 () | 35353..35544 | - | 192 | WP_001027493.1 | hypothetical protein | - |
| FMA85_RS25795 () | 35541..35963 | - | 423 | WP_001763816.1 | DUF1380 family protein | - |
| FMA85_RS25800 () | 36010..36312 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| FMA85_RS26320 () | 36853..37629 | - | 777 | WP_001383963.1 | hypothetical protein | - |
| FMA85_RS25815 () | 37680..38114 | - | 435 | WP_000274503.1 | DUF1380 family protein | - |
| FMA85_RS25820 () | 38128..38349 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| FMA85_RS25825 () | 38350..39033 | - | 684 | WP_000085883.1 | DNA methylase | - |
| FMA85_RS25830 () | 39110..39403 | - | 294 | WP_032146011.1 | hypothetical protein | - |
| FMA85_RS25835 () | 39550..40512 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| FMA85_RS25840 () | 40515..40865 | + | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| FMA85_RS25845 () | 40988..41269 | - | 282 | WP_001333089.1 | hypothetical protein | - |
| FMA85_RS25850 () | 41397..41631 | - | 235 | Protein_59 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FMA85_RS25855 () | 43080..43220 | - | 141 | WP_071557810.1 | hypothetical protein | - |
| FMA85_RS25860 () | 43211..43915 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| FMA85_RS25865 () | 44064..45326 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| FMA85_RS25870 () | 45582..46457 | + | 876 | WP_000239590.1 | hypothetical protein | ARG |
| FMA85_RS25875 () | 46504..46836 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| FMA85_RS25880 () | 46850..49093 | + | 2244 | Protein_65 | Tn3 family transposase TnpA_Tn3 | Transposase |
| FMA85_RS25885 () | 49158..49862 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FMA85_RS25890 () | 49916..50964 | - | 1049 | Protein_67 | IS3 family transposase ISKpn11 | Transposase |
| FMA85_RS25895 () | 51056..51598 | - | 543 | WP_002063889.1 | AAA family ATPase | - |
| FMA85_RS25900 () | 51611..52471 | - | 861 | WP_000557452.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| FMA85_RS25905 () | 52578..53282 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FMA85_RS25910 () | 53336..53776 | - | 441 | Protein_71 | CatB-related O-acetyltransferase | - |
| FMA85_RS25915 () | 53914..54744 | - | 831 | WP_001334766.1 | hypothetical protein | ARG |
| FMA85_RS25920 () | 54875..55429 | - | 555 | WP_063840321.1 | hypothetical protein | ARG |
| FMA85_RS25925 () | 55573..56277 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FMA85_RS25930 () | 56340..59126 | + | 2787 | Protein_75 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| FMA85_RS25935 () | 59263..59664 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| FMA85_RS25940 () | 59597..59854 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| FMA85_RS25945 () | 59947..60600 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| FMA85_RS25950 () | 61539..62396 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| FMA85_RS25955 () | 62389..62463 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| FMA85_RS25960 () | 62701..62955 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| FMA85_RS25965 () | 63195..63785 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| FMA85_RS25970 () | 63823..64032 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| FMA85_RS25975 () | 64078..64539 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| FMA85_RS25980 () | 64584..65281 | - | 698 | Protein_85 | IS1 family transposase IS1R | Transposase |
| FMA85_RS25985 () | 65561..65773 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| FMA85_RS25990 () | 65902..66462 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| FMA85_RS25995 () | 66565..67425 | - | 861 | WP_000704523.1 | hypothetical protein | VF |
| FMA85_RS26000 () | 67484..68230 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| FMA85_RS26005 () | 68250..73520 | - | 5271 | WP_000948354.1 | Multifunctional conjugation protein TraI | Relaxase |
| FMA85_RS26010 () | 73520..75736 | - | 2217 | WP_000009331.1 | type IV conjugative transfer system coupling protein TraD | - |
| FMA85_RS26015 () | 75787..76524 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| FMA85_RS26020 () | 76727..77458 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| FMA85_RS26025 () | 77507..77992 | - | 486 | WP_000605870.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|