MGE detailed information
MGE type: Genomic_island MGE length: 20622 bp
Accession: NZ_CP040805 Location: 1773924..1794545 Organism: Escherichia fergusonii strain EFCF056 Replicon: chromosome
Accession: NZ_CP040805 Location: 1773924..1794545 Organism: Escherichia fergusonii strain EFCF056 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z79_RS08660 () | 1770236..1771222 | + | 987 | Protein_1672 | integrase arm-type DNA-binding domain-containing protein | - |
| D8Z79_RS08670 () | 1772191..1773075 | - | 885 | WP_001553122.1 | integrase domain-containing protein | - |
| D8Z79_RS26065 () | 1773669..1773917 | + | 249 | WP_176550764.1 | hypothetical protein | - |
| D8Z79_RS08685 () | 1773924..1774256 | - | 333 | WP_000373724.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| D8Z79_RS08690 () | 1774257..1774514 | - | 258 | WP_000288812.1 | antitoxin | Antitoxin Detail |
| D8Z79_RS08695 () | 1774612..1774803 | + | 192 | WP_125400862.1 | hypothetical protein | - |
| D8Z79_RS08700 () | 1774862..1775068 | - | 207 | WP_125400861.1 | helix-turn-helix domain-containing protein | - |
| D8Z79_RS08705 () | 1775065..1775520 | - | 456 | WP_125400884.1 | hypothetical protein | - |
| D8Z79_RS08710 () | 1776187..1778229 | - | 2043 | WP_125400860.1 | hypothetical protein | - |
| D8Z79_RS08715 () | 1778234..1778506 | - | 273 | WP_139535880.1 | hypothetical protein | - |
| D8Z79_RS08720 () | 1778658..1779788 | - | 1131 | WP_139535881.1 | hypothetical protein | - |
| D8Z79_RS08725 () | 1779785..1780246 | - | 462 | WP_125400857.1 | hypothetical protein | - |
| D8Z79_RS08730 () | 1780258..1780782 | - | 525 | WP_125400856.1 | MBL fold metallo-hydrolase | - |
| D8Z79_RS08735 () | 1781495..1782799 | + | 1305 | WP_125400855.1 | shikimate transporter | - |
| D8Z79_RS08740 () | 1782927..1784381 | + | 1455 | WP_125400854.1 | AMP nucleosidase | - |
| D8Z79_RS08745 () | 1784557..1784991 | + | 435 | WP_038989254.1 | IS200-IS605 family transposase ISSod23 | Transposase |
| D8Z79_RS08755 () | 1785658..1786794 | - | 1137 | Protein_1688 | ISAs1 family transposase ISEc1 | Transposase |
| D8Z79_RS08760 () | 1787040..1787201 | - | 162 | WP_046077395.1 | hypothetical protein | - |
| D8Z79_RS08770 () | 1787696..1792138 | - | 4443 | Protein_1690 | PAAR domain-containing protein | - |
| D8Z79_RS08775 () | 1792158..1792619 | - | 462 | WP_001160804.1 | DcrB-related protein | - |
| D8Z79_RS08780 () | 1792647..1794545 | - | 1899 | WP_125400481.1 | Actin cross-linking toxin VgrG1 | VF |
| D8Z79_RS08785 () | 1794755..1795273 | - | 519 | WP_001142958.1 | Hcp family type VI secretion system effector | - |
| D8Z79_RS08790 () | 1795965..1796465 | + | 501 | WP_000098291.1 | type VI secretion system contractile sheath small subunit | - |
| D8Z79_RS08795 () | 1796480..1797961 | + | 1482 | WP_000058010.1 | type VI secretion system contractile sheath large subunit | - |
| D8Z79_RS08800 () | 1797964..1798401 | + | 438 | WP_125400480.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|