MGE detailed information
MGE type: Prophage MGE length: 46723 bp
Accession: NZ_CP040799 Location: 1293792..1340514 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-1 Replicon: chromosome
Accession: NZ_CP040799 Location: 1293792..1340514 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FG899_RS05845 () | 1289120..1289905 | + | 786 | WP_004087362.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| FG899_RS05850 () | 1289942..1292548 | - | 2607 | WP_004087363.1 | DNA mismatch repair protein MutS | - |
| FG899_RS05855 () | 1292981..1293712 | - | 732 | WP_012382616.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| FG899_RS05860 () | 1293792..1294652 | + | 861 | WP_004087365.1 | Hsp33 family molecular chaperone HslO | - |
| FG899_RS05865 () | 1294857..1295675 | + | 819 | WP_173391712.1 | hypothetical protein | - |
| FG899_RS05875 () | 1296448..1296792 | - | 345 | WP_004084923.1 | RidA family protein | - |
| FG899_RS05880 () | 1296995..1297327 | - | 333 | WP_004088648.1 | DNA-binding transcriptional regulator | - |
| FG899_RS05885 () | 1297519..1298601 | - | 1083 | WP_011097927.1 | phage late control D family protein | - |
| FG899_RS05890 () | 1298592..1298810 | - | 219 | WP_004088371.1 | tail protein X | - |
| FG899_RS05895 () | 1298807..1299289 | - | 483 | WP_011097928.1 | phage tail protein | - |
| FG899_RS05900 () | 1299286..1301505 | - | 2220 | WP_011097929.1 | phage tail tape measure protein | - |
| FG899_RS05905 () | 1301632..1301919 | - | 288 | WP_011097930.1 | phage tail assembly protein | - |
| FG899_RS05910 () | 1301922..1302431 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| FG899_RS05915 () | 1302431..1303609 | - | 1179 | WP_011097931.1 | phage tail sheath family protein | - |
| FG899_RS05920 () | 1303674..1305266 | - | 1593 | WP_012382617.1 | tail fiber domain-containing protein | - |
| FG899_RS05925 () | 1305274..1305831 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| FG899_RS05930 () | 1305824..1306717 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| FG899_RS05935 () | 1306717..1307055 | - | 339 | WP_004090694.1 | GPW/gp25 family protein | - |
| FG899_RS05940 () | 1307205..1307468 | + | 264 | WP_004090907.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| FG899_RS05945 () | 1307455..1307736 | + | 282 | WP_004090909.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| FG899_RS05950 () | 1307773..1308360 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| FG899_RS05955 () | 1308357..1308899 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| FG899_RS05960 () | 1308875..1309396 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| FG899_RS05965 () | 1309393..1309716 | - | 324 | WP_012382618.1 | hypothetical protein | - |
| FG899_RS05970 () | 1309716..1309976 | - | 261 | WP_012382619.1 | hypothetical protein | - |
| FG899_RS05975 () | 1309994..1311868 | - | 1875 | WP_012382620.1 | phage major capsid protein | - |
| FG899_RS05980 () | 1311865..1313451 | - | 1587 | WP_012382621.1 | phage portal protein | - |
| FG899_RS05985 () | 1313448..1313999 | - | 552 | WP_004088901.1 | hypothetical protein | - |
| FG899_RS05990 () | 1314003..1315955 | - | 1953 | WP_004088899.1 | phage terminase large subunit family protein | - |
| FG899_RS05995 () | 1315948..1316523 | - | 576 | WP_011097938.1 | terminase small subunit | - |
| FG899_RS06000 () | 1316654..1316878 | - | 225 | WP_012382622.1 | hypothetical protein | - |
| FG899_RS06005 () | 1316880..1317341 | - | 462 | WP_011097939.1 | hypothetical protein | - |
| FG899_RS06010 () | 1317331..1317660 | - | 330 | WP_004086884.1 | phage holin family protein | - |
| FG899_RS06015 () | 1317653..1318147 | - | 495 | WP_011097941.1 | lysozyme | - |
| FG899_RS06020 () | 1318114..1318731 | - | 618 | WP_011097942.1 | hypothetical protein | - |
| FG899_RS06025 () | 1319150..1321681 | - | 2532 | WP_012382624.1 | primase | - |
| FG899_RS06030 () | 1321817..1322383 | - | 567 | WP_011097944.1 | Bro-N domain-containing protein | - |
| FG899_RS06035 () | 1322380..1322766 | - | 387 | WP_011097945.1 | phage antirepressor | - |
| FG899_RS06040 () | 1322763..1323149 | - | 387 | WP_011097946.1 | hypothetical protein | - |
| FG899_RS06045 () | 1323146..1323430 | - | 285 | Protein_1145 | hypothetical protein | - |
| FG899_RS06050 () | 1323645..1323915 | - | 271 | Protein_1146 | hypothetical protein | - |
| FG899_RS06055 () | 1323912..1324169 | - | 258 | WP_080729500.1 | hypothetical protein | - |
| FG899_RS06060 () | 1324400..1324645 | - | 246 | WP_012382627.1 | hypothetical protein | - |
| FG899_RS06065 () | 1324706..1324954 | - | 249 | WP_011097950.1 | hypothetical protein | - |
| FG899_RS06070 () | 1324951..1325139 | - | 189 | WP_012382629.1 | hypothetical protein | - |
| FG899_RS06075 () | 1325193..1325759 | - | 567 | WP_012382630.1 | hypothetical protein | - |
| FG899_RS06080 () | 1325749..1326009 | - | 261 | WP_012382631.1 | helix-turn-helix domain-containing protein | - |
| FG899_RS06085 () | 1326095..1326853 | + | 759 | WP_011097952.1 | helix-turn-helix transcriptional regulator | - |
| FG899_RS06090 () | 1327014..1327553 | + | 540 | WP_011097953.1 | hypothetical protein | - |
| FG899_RS06095 () | 1327576..1327785 | + | 210 | WP_012382632.1 | hypothetical protein | - |
| FG899_RS06100 () | 1327839..1328222 | + | 384 | WP_012382633.1 | hypothetical protein | - |
| FG899_RS06105 () | 1328440..1328829 | + | 390 | WP_011097955.1 | hypothetical protein | - |
| FG899_RS06110 () | 1328826..1329290 | + | 465 | WP_011097956.1 | DUF1566 domain-containing protein | - |
| FG899_RS06115 () | 1329347..1329829 | - | 483 | WP_004088357.1 | hypothetical protein | - |
| FG899_RS06120 () | 1330129..1330320 | + | 192 | WP_012382634.1 | hypothetical protein | - |
| FG899_RS06125 () | 1330344..1330535 | + | 192 | WP_012382635.1 | hypothetical protein | - |
| FG899_RS06130 () | 1330567..1330764 | + | 198 | WP_004090711.1 | hypothetical protein | - |
| FG899_RS06135 () | 1330751..1331248 | + | 498 | WP_012382636.1 | hypothetical protein | - |
| FG899_RS06140 () | 1331245..1332522 | + | 1278 | WP_012382637.1 | DUF2800 domain-containing protein | - |
| FG899_RS06145 () | 1332522..1333088 | + | 567 | WP_004090881.1 | DUF2815 family protein | - |
| FG899_RS06150 () | 1333175..1334686 | + | 1512 | WP_011097960.1 | hypothetical protein | - |
| FG899_RS06155 () | 1334688..1336868 | + | 2181 | WP_011097961.1 | DNA polymerase | - |
| FG899_RS06160 () | 1336865..1337143 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| FG899_RS06165 () | 1337145..1337591 | - | 447 | WP_012382639.1 | DUF1640 domain-containing protein | - |
| FG899_RS06170 () | 1337676..1339094 | + | 1419 | WP_011097964.1 | DEAD/DEAH box helicase | - |
| FG899_RS06175 () | 1339091..1339255 | + | 165 | WP_012382640.1 | hypothetical protein | - |
| FG899_RS06180 () | 1339248..1339505 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| FG899_RS06185 () | 1339495..1340514 | + | 1020 | WP_011097966.1 | hypothetical protein ; Integrase | Integrase |
| FG899_RS06190 () | 1340878..1343469 | + | 2592 | WP_004087286.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|