MGE detailed information
MGE type: Prophage MGE length: 55839 bp
Accession: NZ_CP040560 Location: 2033816..2089654 Organism: Staphylococcus aureus strain Col52-A5 Replicon: chromosome
Accession: NZ_CP040560 Location: 2033816..2089654 Organism: Staphylococcus aureus strain Col52-A5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FA001_RS10265 () | 2030000..2030314 | - | 315 | Protein_1934 | MAP domain-containing protein | - |
| FA001_RS10270 () | 2030301..2032055 | - | 1755 | WP_001549158.1 | extracellular adherence protein Eap/Map | - |
| FA001_RS10275 () | 2032441..2032691 | + | 251 | Protein_1936 | sphingomyelin phosphodiesterase | - |
| FA001_RS10280 () | 2033013..2033192 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| FA001_RS10290 () | 2033503..2033763 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| FA001_RS10295 () | 2033816..2034166 | - | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| FA001_RS10300 () | 2034851..2035300 | + | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| FA001_RS10305 () | 2035395..2035730 | - | 336 | Protein_1941 | SH3 domain-containing protein | - |
| FA001_RS10315 () | 2036380..2036871 | - | 492 | WP_000920034.1 | staphylokinase | - |
| FA001_RS10320 () | 2037062..2037817 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| FA001_RS10325 () | 2037829..2038083 | - | 255 | WP_000611512.1 | phage holin | - |
| FA001_RS10330 () | 2038135..2038242 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 2038164..2038303 | + | 140 | NuclAT_0 | - | - |
| - () | 2038164..2038303 | + | 140 | NuclAT_0 | - | - |
| - () | 2038164..2038303 | + | 140 | NuclAT_0 | - | - |
| - () | 2038164..2038303 | + | 140 | NuclAT_0 | - | - |
| - () | 2038172..2038227 | + | 56 | - | - | Antitoxin Detail |
| FA001_RS10335 () | 2038295..2038471 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| FA001_RS10340 () | 2038621..2038917 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| FA001_RS10345 () | 2038975..2039262 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| FA001_RS10350 () | 2039309..2039461 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| FA001_RS10355 () | 2039451..2043236 | - | 3786 | WP_000582137.1 | hypothetical protein | - |
| FA001_RS10360 () | 2043252..2044742 | - | 1491 | WP_001154327.1 | phage tail family protein | - |
| FA001_RS10365 () | 2044742..2049394 | - | 4653 | WP_138658401.1 | phage tail tape measure protein | - |
| FA001_RS10370 () | 2049450..2049572 | - | 123 | WP_000570353.1 | hypothetical protein | - |
| FA001_RS10375 () | 2049632..2050078 | - | 447 | WP_000442601.1 | hypothetical protein | - |
| FA001_RS10380 () | 2050143..2051096 | - | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| FA001_RS10385 () | 2051097..2051477 | - | 381 | WP_000611452.1 | hypothetical protein | - |
| FA001_RS10390 () | 2051474..2051851 | - | 378 | WP_138658403.1 | HK97 gp10 family phage protein | - |
| FA001_RS10395 () | 2051851..2052186 | - | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| FA001_RS10400 () | 2052173..2052505 | - | 333 | WP_001177483.1 | head-tail connector protein | - |
| FA001_RS10405 () | 2052514..2052672 | - | 159 | WP_001252098.1 | hypothetical protein | - |
| FA001_RS10410 () | 2052708..2053955 | - | 1248 | WP_138658405.1 | phage major capsid protein | - |
| FA001_RS10415 () | 2054043..2054627 | - | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| FA001_RS10420 () | 2054620..2055870 | - | 1251 | WP_000511067.1 | phage portal protein | - |
| FA001_RS10425 () | 2055876..2056076 | - | 201 | WP_000365299.1 | hypothetical protein | - |
| FA001_RS10430 () | 2056090..2057784 | - | 1695 | WP_000133304.1 | phage terminase large subunit | - |
| FA001_RS10435 () | 2057787..2058254 | - | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| FA001_RS10440 () | 2058383..2058727 | - | 345 | WP_000817289.1 | HNH endonuclease | - |
| FA001_RS10445 () | 2058743..2059195 | - | 453 | WP_000406191.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| FA001_RS10450 () | 2059310..2059789 | - | 480 | WP_000282754.1 | hypothetical protein | - |
| FA001_RS10460 () | 2059812..2060012 | - | 201 | WP_001803053.1 | DUF1514 family protein | - |
| FA001_RS10465 () | 2060012..2060161 | - | 150 | WP_000595239.1 | transcriptional activator RinB | - |
| FA001_RS10470 () | 2060158..2060364 | - | 207 | WP_000195839.1 | DUF1381 domain-containing protein | - |
| FA001_RS10475 () | 2060361..2060606 | - | 246 | WP_001282074.1 | hypothetical protein | - |
| FA001_RS10480 () | 2060643..2061179 | - | 537 | WP_000185680.1 | dUTPase | - |
| FA001_RS10485 () | 2061172..2061420 | - | 249 | WP_001065044.1 | DUF1024 family protein | - |
| FA001_RS10490 () | 2061435..2061677 | - | 243 | WP_000131381.1 | phi PVL orf 51-like protein | - |
| FA001_RS10495 () | 2061681..2062049 | - | 369 | WP_000101270.1 | hypothetical protein | - |
| FA001_RS10500 () | 2062062..2062517 | - | 456 | WP_000401970.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FA001_RS10505 () | 2062526..2062744 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| FA001_RS10510 () | 2062751..2063644 | - | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| FA001_RS10515 () | 2063674..2064144 | - | 471 | WP_138658407.1 | single-stranded DNA-binding protein | - |
| FA001_RS10520 () | 2064145..2064762 | - | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| FA001_RS10525 () | 2064843..2065763 | - | 921 | WP_000180600.1 | recombinase RecT | - |
| FA001_RS10530 () | 2065765..2067708 | - | 1944 | WP_000700554.1 | AAA family ATPase | - |
| FA001_RS10535 () | 2067717..2067980 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| FA001_RS10540 () | 2067989..2068249 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| FA001_RS10545 () | 2068254..2068556 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| FA001_RS10550 () | 2068651..2068812 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| FA001_RS10555 () | 2068809..2069132 | - | 324 | WP_025174204.1 | DUF771 domain-containing protein | - |
| FA001_RS10560 () | 2069191..2069418 | + | 228 | WP_000801108.1 | hypothetical protein | - |
| FA001_RS10565 () | 2069420..2069611 | - | 192 | WP_000389906.1 | hypothetical protein | - |
| FA001_RS10570 () | 2069661..2070017 | + | 357 | WP_000768245.1 | DUF2513 domain-containing protein | - |
| FA001_RS10575 () | 2070012..2070206 | - | 195 | WP_001148859.1 | hypothetical protein | - |
| FA001_RS10580 () | 2070222..2070977 | - | 756 | WP_001148341.1 | phage antirepressor KilAC domain-containing protein | - |
| FA001_RS10585 () | 2071034..2071573 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| FA001_RS10590 () | 2071597..2071857 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| FA001_RS10595 () | 2071875..2072099 | - | 225 | WP_000338186.1 | DUF739 family protein | - |
| FA001_RS10600 () | 2072258..2073028 | + | 771 | WP_001208482.1 | helix-turn-helix domain-containing protein | - |
| FA001_RS10605 () | 2073228..2073395 | + | 168 | WP_000694771.1 | hypothetical protein | - |
| FA001_RS10610 () | 2073579..2073770 | + | 192 | WP_000159132.1 | hypothetical protein | - |
| FA001_RS10615 () | 2073767..2074348 | - | 582 | WP_000402672.1 | hypothetical protein | - |
| FA001_RS10620 () | 2074456..2075493 | + | 1038 | WP_000857201.1 | site-specific integrase | - |
| FA001_RS10625 () | 2075544..2076374 | + | 831 | Protein_2003 | sphingomyelin phosphodiesterase | - |
| FA001_RS10630 () | 2076612..2077628 | - | 1017 | WP_000595324.1 | bi-component leukocidin LukGH subunit G | - |
| FA001_RS10635 () | 2077650..2078705 | - | 1056 | WP_000791407.1 | bi-component leukocidin LukGH subunit H | - |
| FA001_RS10640 () | 2079140..2080363 | + | 1224 | WP_000206638.1 | ArgE/DapE family deacylase | - |
| FA001_RS10645 () | 2080735..2081580 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| FA001_RS10650 () | 2081642..2082553 | - | 912 | WP_000825510.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| FA001_RS10655 () | 2082714..2084021 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| FA001_RS10665 () | 2084874..2085317 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| FA001_RS10670 () | 2085482..2085859 | - | 378 | WP_001797573.1 | hypothetical protein | - |
| FA001_RS10675 () | 2086177..2086767 | - | 591 | WP_001293058.1 | terminase small subunit | - |
| FA001_RS10680 () | 2086764..2086976 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| FA001_RS10685 () | 2087037..2087583 | + | 547 | Protein_2014 | site-specific integrase | - |
| FA001_RS10690 () | 2087678..2089294 | - | 1617 | WP_000240645.1 | chaperonin GroEL | - |
| FA001_RS10695 () | 2089370..2089654 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| FA001_RS10700 () | 2089829..2090572 | + | 744 | WP_000197631.1 | CPBP family intramembrane metalloprotease | - |
| FA001_RS10705 () | 2090597..2091757 | - | 1161 | WP_138658410.1 | hypothetical protein | - |
| FA001_RS10710 () | 2091954..2092580 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| FA001_RS10715 () | 2092941..2093726 | + | 786 | WP_000867960.1 | carbon-nitrogen family hydrolase | - |
| FA001_RS10720 () | 2094323..2094457 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|