MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 65937 bp
Accession: NZ_CP040433 Location: 3644412..3710348 Organism: Stenotrophomonas maltophilia strain SKK55 Replicon: chromosome
Accession: NZ_CP040433 Location: 3644412..3710348 Organism: Stenotrophomonas maltophilia strain SKK55 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FEO94_RS16715 () | 3639774..3640451 | - | 678 | WP_005410804.1 | response regulator transcription factor | - |
| FEO94_RS16720 () | 3640614..3641075 | - | 462 | WP_061479298.1 | hypothetical protein | - |
| FEO94_RS16725 () | 3641191..3641661 | - | 471 | WP_154351299.1 | hypothetical protein | - |
| FEO94_RS16730 () | 3641756..3642235 | - | 480 | WP_154351300.1 | hypothetical protein | - |
| FEO94_RS16735 () | 3642494..3643372 | - | 879 | WP_005418651.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| FEO94_RS16740 () | 3643470..3643712 | - | 243 | WP_061479300.1 | hypothetical protein | - |
| FEO94_RS16745 () | 3643858..3644361 | + | 504 | WP_134968673.1 | hypothetical protein | - |
| FEO94_RS16750 () | 3644662..3645570 | - | 909 | WP_185807475.1 | LysR family transcriptional regulator | - |
| FEO94_RS16760 () | 3646411..3647322 | + | 912 | WP_185807476.1 | LysR family transcriptional regulator | - |
| FEO94_RS16770 () | 3647854..3648615 | + | 762 | WP_025297717.1 | hypothetical protein | - |
| FEO94_RS16775 () | 3648734..3648952 | + | 219 | WP_011829925.1 | AlpA family transcriptional regulator | - |
| FEO94_RS16780 () | 3648993..3649859 | + | 867 | WP_013982110.1 | hypothetical protein | VF |
| FEO94_RS16785 () | 3649843..3650079 | + | 237 | WP_013982111.1 | type II toxin-antitoxin system HicA family toxin | - |
| FEO94_RS16790 () | 3650072..3651730 | + | 1659 | WP_013982112.1 | ParB family protein | - |
| FEO94_RS16795 () | 3651748..3652308 | + | 561 | WP_023912240.1 | DUF2857 domain-containing protein | - |
| FEO94_RS16800 () | 3652311..3653504 | + | 1194 | WP_023912242.1 | hypothetical protein | - |
| FEO94_RS16805 () | 3653632..3653931 | + | 300 | WP_009618210.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| FEO94_RS16810 () | 3653918..3654205 | + | 288 | WP_009618209.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FEO94_RS16815 () | 3654234..3654425 | + | 192 | WP_011805449.1 | hypothetical protein | - |
| FEO94_RS16820 () | 3654549..3655328 | + | 780 | WP_023912244.1 | TIGR03761 family integrating conjugative element protein | - |
| FEO94_RS16825 () | 3655325..3655873 | + | 549 | WP_023912246.1 | DUF3158 family protein | - |
| FEO94_RS16830 () | 3655870..3656253 | + | 384 | WP_004362284.1 | single-stranded DNA-binding protein | - |
| FEO94_RS16835 () | 3656548..3658563 | + | 2016 | WP_154351304.1 | DNA topoisomerase III | - |
| FEO94_RS16845 () | 3659345..3659581 | + | 237 | WP_031755004.1 | hypothetical protein | - |
| FEO94_RS16850 () | 3659607..3659999 | + | 393 | WP_003141051.1 | hypothetical protein | - |
| FEO94_RS16855 () | 3660250..3660966 | + | 717 | WP_125866636.1 | ABC transporter substrate-binding protein | - |
| FEO94_RS16860 () | 3661257..3662054 | + | 798 | WP_154351305.1 | GTPase | - |
| FEO94_RS16865 () | 3662119..3662484 | + | 366 | WP_154351306.1 | DUF3085 domain-containing protein | - |
| FEO94_RS16870 () | 3662829..3663380 | + | 552 | WP_019751268.1 | DUF3577 domain-containing protein | - |
| FEO94_RS16875 () | 3663436..3664047 | + | 612 | WP_031755001.1 | DUF3275 family protein | - |
| FEO94_RS16880 () | 3664137..3664502 | + | 366 | WP_154351307.1 | hypothetical protein | - |
| FEO94_RS16885 () | 3664587..3665237 | + | 651 | WP_062842676.1 | hypothetical protein | - |
| FEO94_RS16890 () | 3665303..3666412 | + | 1110 | WP_154351308.1 | class I SAM-dependent methyltransferase | - |
| FEO94_RS16895 () | 3666514..3666819 | + | 306 | WP_154351309.1 | hypothetical protein | - |
| FEO94_RS16900 () | 3666919..3669192 | + | 2274 | WP_185807477.1 | DEAD/DEAH box helicase | - |
| FEO94_RS16905 () | 3669391..3669960 | + | 570 | WP_043104882.1 | hypothetical protein | VF |
| FEO94_RS16910 () | 3669957..3670604 | + | 648 | WP_034021462.1 | hypothetical protein | - |
| FEO94_RS16915 () | 3670614..3671333 | + | 720 | WP_013982130.1 | TIGR03759 family integrating conjugative element protein | - |
| FEO94_RS16920 () | 3671318..3671938 | + | 621 | WP_154351310.1 | hypothetical protein | VF |
| FEO94_RS16925 () | 3671935..3672468 | + | 534 | WP_003141015.1 | integrating conjugative element protein | - |
| FEO94_RS16930 () | 3672477..3674633 | + | 2157 | WP_154351311.1 | type IV conjugative transfer system coupling protein TraD | - |
| FEO94_RS16935 () | 3674630..3675379 | + | 750 | WP_154351312.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| FEO94_RS16945 () | 3675608..3677473 | + | 1866 | Protein_3321 | Na+/H+ antiporter NhaA | - |
| FEO94_RS16950 () | 3677499..3678341 | + | 843 | Protein_3322 | excinuclease ABC subunit A | - |
| FEO94_RS16955 () | 3678596..3680114 | - | 1519 | Protein_3323 | IS91 family transposase ISPps1 | Transposase |
| FEO94_RS16960 () | 3680300..3680983 | - | 684 | WP_045785197.1 | c-type cytochrome | - |
| FEO94_RS16965 () | 3680980..3682143 | - | 1164 | WP_154351313.1 | molybdopterin-dependent oxidoreductase | - |
| FEO94_RS16970 () | 3682264..3683649 | - | 1386 | WP_061960174.1 | beta-propeller fold lactonase family protein | - |
| FEO94_RS16975 () | 3683649..3684140 | - | 492 | WP_052698580.1 | DUF305 domain-containing protein | - |
| FEO94_RS16980 () | 3684145..3684987 | - | 843 | WP_061960173.1 | anti-sigma factor | - |
| FEO94_RS16985 () | 3684984..3685511 | - | 528 | WP_185807478.1 | ECF RNA polymerase sigma factor EcfG | VF |
| FEO94_RS16990 () | 3685535..3685972 | - | 438 | WP_154351314.1 | nuclear transport factor 2 family protein | - |
| FEO94_RS16995 () | 3685968..3686117 | + | 150 | Protein_3331 | IS3 family transposase | - |
| FEO94_RS17000 () | 3686159..3686482 | - | 324 | Protein_3332 | type II toxin-antitoxin system YhaV family toxin | - |
| FEO94_RS17005 () | 3686448..3688232 | - | 1785 | Protein_3333 | DEAD/DEAH box helicase | - |
| FEO94_RS17010 () | 3688291..3688491 | - | 201 | WP_003141001.1 | helix-turn-helix domain-containing protein | - |
| FEO94_RS17015 () | 3688715..3689086 | + | 372 | WP_154351315.1 | RAQPRD family integrative conjugative element protein | - |
| FEO94_RS17020 () | 3689083..3689322 | + | 240 | WP_003140997.1 | TIGR03758 family integrating conjugative element protein | - |
| FEO94_RS17025 () | 3689345..3689713 | + | 369 | WP_019484549.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| FEO94_RS17030 () | 3689726..3690136 | + | 411 | WP_017244834.1 | TIGR03750 family conjugal transfer protein | - |
| FEO94_RS17035 () | 3690133..3690825 | + | 693 | WP_019484551.1 | TIGR03746 family integrating conjugative element protein | - |
| FEO94_RS17040 () | 3690822..3691736 | + | 915 | WP_023083168.1 | TIGR03749 family integrating conjugative element protein | - |
| FEO94_RS17045 () | 3691726..3693159 | + | 1434 | WP_154351316.1 | TIGR03752 family integrating conjugative element protein | - |
| FEO94_RS17050 () | 3693140..3693574 | + | 435 | WP_023083166.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| FEO94_RS17055 () | 3693574..3696462 | + | 2889 | WP_154351317.1 | conjugative transfer ATPase | - |
| FEO94_RS17060 () | 3696476..3697219 | + | 744 | WP_061959005.1 | thioredoxin domain-containing protein | - |
| FEO94_RS17065 () | 3697415..3697909 | + | 495 | WP_045786220.1 | DNA repair protein RadC | - |
| FEO94_RS17070 () | 3698063..3698512 | + | 450 | WP_061959006.1 | TIGR03757 family integrating conjugative element protein | - |
| FEO94_RS17075 () | 3698509..3699453 | + | 945 | WP_154351318.1 | TIGR03756 family integrating conjugative element protein | - |
| FEO94_RS17080 () | 3699464..3700870 | + | 1407 | WP_033873014.1 | integrating conjugative element protein | - |
| FEO94_RS17085 () | 3700867..3701220 | + | 354 | WP_003292115.1 | hypothetical protein | - |
| FEO94_RS17090 () | 3701236..3702759 | + | 1524 | WP_154351319.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| FEO94_RS17095 () | 3702767..3703138 | - | 372 | WP_013982148.1 | DUF3742 family protein | - |
| FEO94_RS17100 () | 3703362..3704120 | + | 759 | WP_023121122.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| FEO94_RS17105 () | 3704113..3705033 | + | 921 | WP_154351320.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| FEO94_RS17110 () | 3705236..3707086 | + | 1851 | WP_154351321.1 | TraI domain-containing protein | - |
| FEO94_RS17115 () | 3707113..3707459 | - | 347 | Protein_3355 | helix-turn-helix transcriptional regulator | - |
| FEO94_RS17120 () | 3707565..3708191 | + | 627 | WP_154351322.1 | substrate-binding domain-containing protein | - |
| FEO94_RS17125 () | 3708239..3710092 | - | 1854 | WP_023657702.1 | Prophage integrase IntS ; Integrase | Integrase |
| FEO94_RS17135 () | 3710525..3712378 | - | 1854 | WP_154351323.1 | autotransporter domain-containing protein | - |
| FEO94_RS17140 () | 3712586..3712786 | + | 201 | WP_005418796.1 | sulfur carrier protein ThiS | - |
| FEO94_RS17145 () | 3712905..3713699 | + | 795 | WP_005418798.1 | thiazole synthase | - |
| FEO94_RS17150 () | 3713699..3714433 | + | 735 | WP_154351324.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|