MGE detailed information
MGE type: Genomic_island MGE length: 36588 bp
Accession: NZ_CP040235 Location: 1043330..1079917 Organism: Bifidobacterium longum strain ZJ1 Replicon: chromosome
Accession: NZ_CP040235 Location: 1043330..1079917 Organism: Bifidobacterium longum strain ZJ1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FCE94_RS04515 () | 1038504..1038923 | + | 420 | WP_007052224.1 | aspartate carbamoyltransferase regulatory subunit | - |
| FCE94_RS04520 () | 1038920..1040416 | + | 1497 | WP_007054219.1 | amidohydrolase family protein | - |
| FCE94_RS04525 () | 1040434..1041387 | + | 954 | WP_007052226.1 | orotidine-5'-phosphate decarboxylase | - |
| FCE94_RS04530 () | 1041523..1042347 | + | 825 | WP_007052227.1 | dihydroorotate dehydrogenase electron transfer subunit | - |
| FCE94_RS04535 () | 1042350..1043321 | + | 972 | WP_007052228.1 | dihydroorotate dehydrogenase | - |
| FCE94_RS04540 () | 1043330..1044025 | + | 696 | WP_007052229.1 | orotate phosphoribosyltransferase | - |
| FCE94_RS10735 () | 1044134..1044286 | + | 153 | WP_007054223.1 | hypothetical protein | - |
| FCE94_RS04545 () | 1044501..1045622 | + | 1122 | WP_060662159.1 | DUF2974 domain-containing protein | - |
| FCE94_RS04550 () | 1045777..1046700 | - | 924 | WP_007052232.1 | HTH-type transcriptional regulator HdfR | VF |
| FCE94_RS04555 () | 1046802..1047431 | - | 630 | WP_007056272.1 | HAD family phosphatase | - |
| FCE94_RS04560 () | 1047533..1049296 | - | 1764 | WP_137658400.1 | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | - |
| FCE94_RS04565 () | 1049336..1050526 | - | 1191 | WP_007052235.1 | pyridoxal phosphate-dependent aminotransferase | - |
| FCE94_RS04570 () | 1051395..1052189 | + | 795 | WP_008783474.1 | RNA helicase | - |
| FCE94_RS04575 () | 1052198..1052539 | - | 342 | WP_007052237.1 | DUF488 domain-containing protein | - |
| FCE94_RS04580 () | 1052651..1052962 | - | 312 | WP_008783472.1 | hypothetical protein | - |
| FCE94_RS04585 () | 1053047..1053599 | - | 553 | Protein_847 | Fic family protein | - |
| FCE94_RS04590 () | 1053699..1054010 | - | 312 | WP_118068965.1 | virulence RhuM family protein | - |
| FCE94_RS04595 () | 1054266..1054889 | + | 624 | WP_007052241.1 | hypothetical protein | - |
| FCE94_RS04600 () | 1054863..1055168 | - | 306 | WP_007054231.1 | hypothetical protein | - |
| FCE94_RS04605 () | 1055313..1055613 | + | 301 | Protein_851 | DUF1287 domain-containing protein | - |
| FCE94_RS04610 () | 1055621..1056646 | - | 1026 | WP_013410898.1 | hypothetical protein | - |
| FCE94_RS10740 () | 1056967..1057395 | + | 429 | WP_165499369.1 | hypothetical protein | - |
| FCE94_RS04620 () | 1057475..1058125 | + | 651 | WP_118068968.1 | signal peptidase I | - |
| FCE94_RS04625 () | 1058330..1059904 | - | 1575 | WP_118068971.1 | amino acid permease | - |
| FCE94_RS04630 () | 1060225..1060857 | - | 633 | WP_007054235.1 | MFS transporter | - |
| FCE94_RS04635 () | 1060889..1061044 | - | 156 | WP_007056283.1 | hypothetical protein | - |
| FCE94_RS04640 () | 1061052..1061273 | + | 222 | WP_007054237.1 | YidC/Oxa1 family membrane protein insertase | - |
| FCE94_RS04645 () | 1061273..1061947 | + | 675 | WP_077322431.1 | YidC/Oxa1 family membrane protein insertase | - |
| FCE94_RS04650 () | 1062049..1062669 | + | 621 | WP_007054239.1 | NUDIX hydrolase | - |
| FCE94_RS04655 () | 1062698..1063021 | + | 324 | WP_012471871.1 | amidohydrolase | - |
| FCE94_RS10745 () | 1063185..1063331 | - | 147 | WP_007056267.1 | hypothetical protein | - |
| FCE94_RS10750 () | 1063671..1063964 | - | 294 | WP_012471870.1 | hypothetical protein | - |
| FCE94_RS04665 () | 1064057..1064698 | - | 642 | WP_007056262.1 | hypothetical protein | - |
| FCE94_RS04670 () | 1064912..1065091 | + | 180 | WP_007056286.1 | antitoxin VbhA family protein | - |
| FCE94_RS04675 () | 1065088..1065672 | + | 585 | WP_007056278.1 | hypothetical protein | VF |
| FCE94_RS04680 () | 1065875..1066159 | - | 285 | WP_007056282.1 | hypothetical protein | - |
| FCE94_RS04685 () | 1066176..1066511 | - | 336 | WP_007056255.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| FCE94_RS04690 () | 1066515..1066784 | - | 270 | WP_007056990.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| FCE94_RS04695 () | 1066969..1068138 | - | 1170 | WP_118068976.1 | ABC transporter permease | - |
| FCE94_RS04700 () | 1068135..1068780 | - | 646 | Protein_871 | hypothetical protein | VF |
| FCE94_RS04705 () | 1068777..1069667 | - | 891 | WP_007056280.1 | hypothetical protein | - |
| FCE94_RS04710 () | 1069664..1070179 | - | 516 | WP_032685213.1 | hypothetical protein | - |
| FCE94_RS04715 () | 1070305..1071000 | + | 696 | WP_003829410.1 | response regulator transcription factor | - |
| FCE94_RS04720 () | 1071066..1072139 | + | 1074 | Protein_875 | histidine kinase | - |
| FCE94_RS04730 () | 1072540..1072908 | - | 369 | WP_137658401.1 | response regulator | - |
| FCE94_RS04740 () | 1073083..1074360 | - | 1278 | WP_137658403.1 | IS256 family transposase ISBlo8 | Transposase |
| FCE94_RS10755 () | 1075064..1075318 | + | 255 | WP_003829406.1 | hypothetical protein | - |
| FCE94_RS04755 () | 1075481..1076287 | + | 807 | WP_011068121.1 | Abi family protein | - |
| FCE94_RS04770 () | 1076696..1077026 | + | 331 | Protein_880 | hypothetical protein | - |
| FCE94_RS04775 () | 1077162..1077695 | + | 534 | WP_117768488.1 | GNAT family N-acetyltransferase | - |
| FCE94_RS04780 () | 1077736..1077918 | - | 183 | WP_007052274.1 | DUF2316 family protein | - |
| FCE94_RS04785 () | 1078076..1078591 | - | 516 | WP_175406638.1 | GNAT family N-acetyltransferase | - |
| FCE94_RS04790 () | 1078770..1079228 | + | 459 | WP_007055761.1 | ASCH domain-containing protein | - |
| FCE94_RS04795 () | 1079290..1079917 | + | 628 | Protein_885 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| FCE94_RS04800 () | 1080268..1081281 | + | 1014 | WP_169051290.1 | VanZ family protein | - |
| FCE94_RS04810 () | 1081509..1082393 | - | 885 | Protein_887 | amino acid permease | - |
| FCE94_RS04815 () | 1082517..1083368 | + | 852 | WP_117821820.1 | deoxyribonuclease IV | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|