MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95348 bp
Accession: NZ_CP039475 Location: 1..95348 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000968 Replicon: plasmid pCFSAN000968_2
Accession: NZ_CP039475 Location: 1..95348 Organism: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000968 Replicon: plasmid pCFSAN000968_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3396_RS23465 () | 1..1275 | + | 1275 | WP_023196150.1 | Y-family DNA polymerase | - |
| E3396_RS23470 () | 1277..1693 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| E3396_RS23475 () | 1686..2666 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| E3396_RS23480 () | 3080..3388 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| E3396_RS23485 () | 3475..4119 | - | 645 | WP_001144036.1 | ParA family protein | - |
| E3396_RS23490 () | 4299..5078 | - | 780 | WP_001628154.1 | site-specific integrase | - |
| E3396_RS23495 () | 5080..5493 | - | 414 | WP_000465036.1 | hypothetical protein | - |
| E3396_RS23500 () | 6061..6318 | + | 258 | WP_000371885.1 | hypothetical protein | - |
| E3396_RS23505 () | 6318..6908 | + | 591 | WP_000194574.1 | hypothetical protein | - |
| E3396_RS23510 () | 7097..7573 | + | 477 | WP_031618786.1 | hypothetical protein | - |
| E3396_RS23515 () | 8000..9228 | + | 1229 | WP_113708090.1 | IS3-like element IS2 family transposase | - |
| E3396_RS23520 () | 9766..10114 | + | 349 | Protein_12 | hypothetical protein | - |
| E3396_RS23525 () | 10388..10990 | + | 603 | WP_031618784.1 | proQ/FINO family protein | - |
| E3396_RS23530 () | 11046..11546 | + | 501 | WP_024230392.1 | hypothetical protein | - |
| E3396_RS23535 () | 11551..11817 | + | 267 | WP_021576094.1 | hypothetical protein | - |
| E3396_RS23540 () | 12009..12290 | - | 282 | WP_031618783.1 | hypothetical protein | - |
| E3396_RS23545 () | 12396..12671 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E3396_RS23550 () | 12671..12955 | - | 285 | WP_001674495.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| E3396_RS23570 () | 13863..14894 | - | 1032 | WP_000907863.1 | replication initiation protein | - |
| E3396_RS23585 () | 15867..16130 | + | 264 | Protein_20 | ash family protein | - |
| E3396_RS23590 () | 16048..16335 | + | 288 | WP_000074853.1 | hypothetical protein | - |
| E3396_RS23600 () | 16777..17310 | + | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| E3396_RS23610 () | 17564..18247 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| E3396_RS23620 () | 18419..18673 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| E3396_RS23630 () | 18934..19194 | + | 261 | WP_031618781.1 | hypothetical protein | - |
| E3396_RS23640 () | 19871..20938 | + | 1068 | WP_001685263.1 | type IV pilus biogenesis lipoprotein PilL | - |
| E3396_RS23645 () | 20938..21375 | + | 438 | WP_000539811.1 | type IV pilus biogenesis protein PilM | - |
| E3396_RS23650 () | 21389..23071 | + | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| E3396_RS23655 () | 23064..24359 | + | 1296 | WP_031618780.1 | type 4b pilus protein PilO2 | - |
| E3396_RS23660 () | 24346..24798 | + | 453 | WP_001247333.1 | type IV pilus biogenesis protein PilP | - |
| E3396_RS23665 () | 24809..26362 | + | 1554 | WP_000362204.1 | Flp pilus assembly complex ATPase component TadA | - |
| E3396_RS23670 () | 26375..27460 | + | 1086 | WP_031618779.1 | type II secretion system F family protein | - |
| E3396_RS23675 () | 27477..28091 | + | 615 | WP_001685259.1 | pilS family protein | - |
| E3396_RS23680 () | 28101..28661 | + | 561 | WP_000014005.1 | lytic transglycosylase domain-containing protein | - |
| E3396_RS23685 () | 28646..29302 | + | 657 | WP_001193551.1 | prepilin peptidase | - |
| E3396_RS23690 () | 29290..30726 | + | 1437 | WP_186270791.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| E3396_RS23695 () | 30723..30920 | - | 198 | WP_032159596.1 | hypothetical protein | - |
| E3396_RS23730 () | 32360..33514 | + | 1155 | WP_001139955.1 | integrase | - |
| E3396_RS23735 () | 33665..34489 | + | 825 | WP_031618800.1 | hypothetical protein | - |
| E3396_RS23740 () | 34575..35777 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| E3396_RS23745 () | 35837..36421 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| E3396_RS23750 () | 36816..37274 | + | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| E3396_RS23755 () | 37271..38089 | + | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| E3396_RS23760 () | 38086..39234 | + | 1149 | WP_001024975.1 | plasmid transfer ATPase TraJ | - |
| E3396_RS23765 () | 39231..39521 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| E3396_RS23770 () | 39536..40087 | + | 552 | WP_000014584.1 | phospholipase D family protein | - |
| E3396_RS23775 () | 40177..43944 | + | 3768 | WP_031618799.1 | DNA primase | - |
| E3396_RS23780 () | 43962..44309 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| E3396_RS23785 () | 44306..44998 | + | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| E3396_RS23790 () | 45009..45992 | + | 984 | WP_031618798.1 | IncI1-type conjugal transfer protein TraN | - |
| E3396_RS23795 () | 45995..47284 | + | 1290 | WP_031618797.1 | conjugal transfer protein TraO | - |
| E3396_RS23800 () | 47284..47988 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| E3396_RS23805 () | 47988..48515 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| E3396_RS23810 () | 48566..48970 | + | 405 | WP_021497835.1 | IncI1-type conjugal transfer protein TraR | - |
| E3396_RS23815 () | 49034..49222 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| E3396_RS23820 () | 49206..50006 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| E3396_RS23825 () | 50096..53140 | + | 3045 | WP_024227038.1 | IncI1-type conjugal transfer protein TraU | - |
| E3396_RS23830 () | 53140..53754 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| E3396_RS23835 () | 53721..54923 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| E3396_RS23840 () | 54952..55536 | + | 585 | WP_001037996.1 | IncI1-type conjugal transfer protein TraX | - |
| E3396_RS23845 () | 55633..57801 | + | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| E3396_RS23850 () | 57872..58534 | + | 663 | WP_021565541.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| E3396_RS23855 () | 58606..58815 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| E3396_RS24215 () | 59147..59323 | + | 177 | WP_001054898.1 | hypothetical protein | - |
| E3396_RS23860 () | 59980..60231 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| E3396_RS23865 () | 60303..60455 | - | 153 | WP_024179505.1 | Hok/Gef family protein | - |
| E3396_RS23870 () | 60770..61861 | + | 1092 | WP_000426061.1 | hypothetical protein | - |
| E3396_RS23875 () | 62168..63376 | + | 1209 | WP_000121263.1 | IncI1-type conjugal transfer protein TrbA | - |
| E3396_RS23880 () | 63395..64465 | + | 1071 | WP_031618795.1 | IncI1-type conjugal transfer protein TrbB | - |
| E3396_RS23885 () | 64458..66749 | + | 2292 | WP_077915555.1 | conjugal transfer protein TrbC | - |
| E3396_RS23895 () | 67534..68169 | + | 636 | WP_031618793.1 | CPBP family intramembrane metalloprotease | - |
| E3396_RS23900 () | 68272..69525 | + | 1254 | WP_031618765.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| E3396_RS23905 () | 69525..71714 | + | 2190 | WP_031618764.1 | peptidase domain-containing ABC transporter | - |
| E3396_RS23910 () | 71764..72336 | - | 573 | WP_001401844.1 | hypothetical protein | - |
| E3396_RS23915 () | 72362..75061 | - | 2700 | WP_072002100.1 | IncI1-type relaxase NikB | - |
| E3396_RS23920 () | 75072..75404 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| E3396_RS23925 () | 75638..75973 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| E3396_RS23930 () | 76059..76907 | - | 849 | WP_001077019.1 | DUF4942 domain-containing protein | - |
| E3396_RS23940 () | 77488..77739 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| E3396_RS23945 () | 77770..78015 | - | 246 | WP_001260884.1 | hypothetical protein | - |
| E3396_RS23950 () | 78015..78929 | - | 915 | WP_000038334.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E3396_RS23955 () | 78994..79260 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| E3396_RS23960 () | 79354..79788 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| E3396_RS23975 () | 80517..81017 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| E3396_RS23985 () | 81480..82076 | - | 597 | WP_000978012.1 | hypothetical protein | - |
| E3396_RS23990 () | 82073..82792 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| E3396_RS23995 () | 82789..83223 | - | 435 | WP_001535709.1 | conjugation system SOS inhibitor PsiB | - |
| E3396_RS24000 () | 83278..85236 | - | 1959 | WP_031618761.1 | ParB/RepB/Spo0J family partition protein | - |
| E3396_RS24005 () | 85295..85528 | - | 234 | WP_000006012.1 | DUF905 family protein | - |
| E3396_RS24010 () | 85586..86113 | - | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| E3396_RS24020 () | 86497..86811 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| E3396_RS24030 () | 86882..87073 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| E3396_RS24035 () | 87070..87492 | - | 423 | WP_031618867.1 | DUF1380 family protein | - |
| E3396_RS24040 () | 87539..87964 | - | 426 | WP_001198941.1 | antirestriction protein | - |
| E3396_RS24050 () | 88382..89158 | - | 777 | WP_031618789.1 | hypothetical protein | - |
| E3396_RS24055 () | 89204..89638 | - | 435 | WP_000274500.1 | DUF1380 family protein | - |
| E3396_RS24060 () | 89652..89873 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| E3396_RS24065 () | 89874..90557 | - | 684 | WP_000086148.1 | DNA methylase | - |
| E3396_RS24070 () | 90633..90944 | - | 312 | WP_014640311.1 | hypothetical protein | - |
| E3396_RS24075 () | 90941..91843 | - | 903 | WP_031618788.1 | DUF1281 domain-containing protein | - |
| E3396_RS24080 () | 91920..93644 | - | 1725 | WP_031618787.1 | group II intron reverse transcriptase/maturase | - |
| E3396_RS24100 () | 94667..94915 | + | 249 | WP_000618111.1 | DinI-like family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|