MGE detailed information
MGE type: IScluster/Tn MGE length: 17276 bp
Accession: NZ_CP038894 Location: 105341..122616 Organism: Piscirickettsia salmonis strain Psal-006a Replicon: plasmid unnamed1
Accession: NZ_CP038894 Location: 105341..122616 Organism: Piscirickettsia salmonis strain Psal-006a Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Psal006a_RS16975 () | 101329..101616 | + | 288 | WP_016212456.1 | type II toxin-antitoxin system HigB family toxin | - |
| Psal006a_RS16980 () | 101613..102014 | + | 402 | WP_036779532.1 | helix-turn-helix domain-containing protein | - |
| Psal006a_RS16985 () | 102024..104210 | - | 2187 | WP_075273881.1 | ATP-dependent RecD-like DNA helicase | - |
| Psal006a_RS16990 () | 104331..104564 | - | 234 | WP_016212404.1 | hypothetical protein | - |
| Psal006a_RS16995 () | 104620..104838 | - | 219 | WP_016212407.1 | transposase | - |
| Psal006a_RS17000 () | 105341..106075 | + | 735 | WP_075273857.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal006a_RS17005 () | 106229..106960 | - | 732 | WP_016212311.1 | hypothetical protein | - |
| Psal006a_RS17015 () | 107081..108664 | - | 1584 | WP_052047129.1 | protein kinase | - |
| Psal006a_RS17020 () | 108947..109675 | - | 729 | WP_075274745.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal006a_RS17025 () | 109743..110183 | - | 441 | Protein_150 | tyrosine-type recombinase/integrase | - |
| Psal006a_RS17030 () | 110388..110630 | + | 243 | WP_016212365.1 | antidote-toxin recognition MazE family protein | Antitoxin Detail |
| Psal006a_RS17035 () | 110632..110958 | + | 327 | WP_036781349.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| Psal006a_RS17040 () | 111074..111802 | + | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal006a_RS17045 () | 112272..112655 | + | 384 | WP_016212152.1 | hypothetical protein | - |
| Psal006a_RS17050 () | 112962..113339 | - | 378 | WP_016212154.1 | IS3 family transposase ISSde6 | Transposase |
| Psal006a_RS17055 () | 113504..113836 | - | 333 | WP_155047283.1 | IS91 family transposase ISEc37 | Transposase |
| Psal006a_RS17065 () | 114025..114804 | - | 780 | WP_081377351.1 | IS91 family transposase ISVa3 | Transposase |
| Psal006a_RS17070 () | 114905..115162 | - | 258 | Protein_158 | IS6 family transposase ISPsa2 | Transposase |
| Psal006a_RS18620 () | 115451..115570 | - | 120 | Protein_159 | IS6 family transposase ISPsa2 | Transposase |
| Psal006a_RS17080 () | 115906..116601 | + | 696 | WP_016212019.1 | IS6 family transposase ISSba18 | Transposase |
| Psal006a_RS17085 () | 117070..117345 | - | 276 | WP_105962690.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Psal006a_RS17090 () | 117342..117587 | - | 246 | WP_047927838.1 | hypothetical protein | - |
| Psal006a_RS17095 () | 117617..117844 | - | 228 | WP_155047016.1 | hypothetical protein | - |
| Psal006a_RS17100 () | 118248..118661 | - | 414 | WP_016212014.1 | DUF2190 family protein | - |
| Psal006a_RS17105 () | 118759..119487 | - | 729 | WP_054300202.1 | IS6 family transposase ISPsa2 | Transposase |
| Psal006a_RS17110 () | 119554..120707 | + | 1154 | WP_105962623.1 | IS3 family transposase ISMasp3 | Transposase |
| Psal006a_RS17115 () | 121336..122364 | + | 1029 | WP_155047284.1 | hypothetical protein | - |
| Psal006a_RS17120 () | 122485..122613 | + | 129 | Protein_168 | IS6 family transposase ISPsa2 | Transposase |
| Psal006a_RS17130 () | 123757..124884 | - | 1128 | WP_075273826.1 | hypothetical protein | - |
| Psal006a_RS17135 () | 125105..125251 | + | 147 | WP_155047013.1 | hypothetical protein | - |
| Psal006a_RS17140 () | 125581..126396 | + | 816 | WP_081377350.1 | transposase | - |
| Psal006a_RS17145 () | 126642..127232 | + | 591 | WP_036780064.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|