MGE detailed information
MGE type: Mobilizable plasmid MGE length: 180464 bp
Accession: NZ_CP038855 Location: 1..180464 Organism: Pantoea vagans strain LMG 24199 Replicon: plasmid pVag2
Accession: NZ_CP038855 Location: 1..180464 Organism: Pantoea vagans strain LMG 24199 Replicon: plasmid pVag2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGO56_RS21500 () | 1..1536 | + | 1536 | WP_135911050.1 | carbohydrate porin | - |
| EGO56_RS21505 () | 1604..2974 | + | 1371 | WP_135911051.1 | sucrose-specific PTS transporter subunit IIBC | - |
| EGO56_RS21510 () | 2974..4383 | + | 1410 | WP_135911052.1 | sucrose-6-phosphate hydrolase | - |
| EGO56_RS21515 () | 4413..5417 | + | 1005 | WP_135911053.1 | substrate-binding domain-containing protein | - |
| EGO56_RS21520 () | 5446..6636 | - | 1191 | WP_135911054.1 | cytochrome P450 | - |
| EGO56_RS21525 () | 6659..7204 | - | 546 | WP_135911055.1 | chorismate mutase | - |
| EGO56_RS21530 () | 7524..8690 | - | 1167 | WP_135911056.1 | glutathione-dependent formaldehyde dehydrogenase | - |
| EGO56_RS21535 () | 8691..9224 | - | 534 | WP_135911057.1 | SRPBCC family protein | - |
| EGO56_RS21540 () | 9453..9698 | + | 246 | WP_135911058.1 | hypothetical protein | - |
| EGO56_RS21545 () | 9700..10611 | - | 912 | WP_135911059.1 | GNAT family N-acetyltransferase | - |
| EGO56_RS21550 () | 11087..11296 | + | 210 | WP_033735123.1 | hypothetical protein | - |
| EGO56_RS21555 () | 11694..13277 | + | 1584 | WP_135911060.1 | diguanylate cyclase | - |
| EGO56_RS21560 () | 13302..15083 | - | 1782 | WP_135911061.1 | GGDEF and EAL domain-containing protein | - |
| EGO56_RS21565 () | 15431..16813 | + | 1383 | WP_135911062.1 | Methyl-accepting chemotaxis protein II | VF |
| EGO56_RS21570 () | 17229..17468 | + | 240 | WP_135911063.1 | transcriptional regulator | - |
| EGO56_RS21580 () | 17895..20024 | + | 2130 | WP_135911065.1 | EAL domain-containing protein | - |
| EGO56_RS21585 () | 20070..20654 | - | 585 | WP_135911066.1 | GNAT family N-acetyltransferase | - |
| EGO56_RS21590 () | 20909..21478 | + | 570 | WP_135911067.1 | Pyridoxine/pyridoxamine 5'-phosphate oxidase | VF |
| EGO56_RS21595 () | 21755..23221 | + | 1467 | WP_135911068.1 | YsnF/AvaK domain-containing protein | - |
| EGO56_RS21605 () | 23668..23967 | + | 300 | WP_135911070.1 | type II toxin-antitoxin system HigB family toxin | - |
| EGO56_RS21610 () | 23967..24359 | + | 393 | WP_135911071.1 | transcriptional regulator | - |
| EGO56_RS21615 () | 24579..27116 | + | 2538 | WP_135911072.1 | UvrABC system protein A | VF |
| EGO56_RS21620 () | 27190..27444 | - | 255 | WP_135911073.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| EGO56_RS21625 () | 27441..27692 | - | 252 | WP_135911074.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | Antitoxin Detail |
| EGO56_RS21630 () | 27852..28691 | - | 840 | WP_135911075.1 | MBL fold metallo-hydrolase | - |
| EGO56_RS21635 () | 28856..30169 | - | 1314 | WP_033785223.1 | CitMHS family transporter | - |
| EGO56_RS21640 () | 30511..31962 | - | 1452 | WP_135911076.1 | Flagellin 2 | VF |
| EGO56_RS22415 () | 32168..32941 | - | 774 | WP_185948896.1 | Diacetyl reductase [(S)-acetoin forming] | VF |
| EGO56_RS21645 () | 32963..34642 | - | 1680 | WP_185948895.1 | acetolactate synthase AlsS | - |
| EGO56_RS21650 () | 34657..35439 | - | 783 | WP_135911077.1 | acetolactate decarboxylase | - |
| EGO56_RS21655 () | 35544..36449 | + | 906 | WP_135911078.1 | LysR family transcriptional regulator | - |
| EGO56_RS21660 () | 36522..36767 | + | 246 | WP_013356609.1 | hypothetical protein | - |
| EGO56_RS21665 () | 36830..39874 | - | 3045 | WP_135911079.1 | efflux RND transporter permease subunit | - |
| EGO56_RS21670 () | 39871..41004 | - | 1134 | WP_135911080.1 | efflux RND transporter periplasmic adaptor subunit | - |
| EGO56_RS21675 () | 41097..42266 | - | 1170 | WP_135911081.1 | HAMP domain-containing protein | - |
| EGO56_RS21680 () | 42263..42958 | - | 696 | WP_033785233.1 | Response regulator ArlR | VF |
| EGO56_RS21685 () | 43088..43876 | + | 789 | WP_135911082.1 | MipA/OmpV family protein | - |
| EGO56_RS21690 () | 44520..45494 | + | 975 | WP_135911083.1 | Recombination-promoting nuclease RpnA | VF |
| EGO56_RS21695 () | 45549..46436 | - | 888 | WP_135911084.1 | ROK family protein | - |
| EGO56_RS21700 () | 46675..47955 | - | 1281 | WP_135911085.1 | beta-ketoacyl-ACP synthase II | - |
| EGO56_RS21705 () | 48184..48798 | - | 615 | WP_013356598.1 | Fatty acid metabolism regulator protein | VF |
| EGO56_RS21710 () | 48954..50915 | - | 1962 | WP_135911086.1 | Acetoin dehydrogenase operon transcriptional activator AcoR | VF |
| EGO56_RS21715 () | 51381..52394 | + | 1014 | WP_135911087.1 | Gfo/Idh/MocA family oxidoreductase | - |
| EGO56_RS21720 () | 52394..53173 | + | 780 | WP_135911088.1 | TIM barrel protein | - |
| EGO56_RS21725 () | 53244..54164 | + | 921 | WP_135911089.1 | substrate-binding domain-containing protein | - |
| EGO56_RS21730 () | 54228..55172 | + | 945 | WP_135911090.1 | winged helix-turn-helix domain-containing protein | - |
| EGO56_RS21735 () | 55169..55666 | + | 498 | WP_135911091.1 | hypothetical protein | - |
| EGO56_RS21740 () | 55722..57905 | - | 2184 | WP_135911092.1 | peptidase domain-containing ABC transporter | - |
| EGO56_RS21745 () | 57923..59182 | - | 1260 | WP_135911093.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| EGO56_RS21750 () | 59208..60530 | - | 1323 | WP_135911172.1 | TolC family outer membrane protein | - |
| EGO56_RS21755 () | 60562..61218 | - | 657 | WP_135911094.1 | response regulator transcription factor | - |
| EGO56_RS21760 () | 62827..63417 | + | 591 | WP_135911095.1 | helix-turn-helix domain-containing protein | - |
| EGO56_RS21765 () | 63455..64084 | + | 630 | WP_135911096.1 | LuxR family transcriptional regulator | - |
| EGO56_RS21770 () | 65012..65539 | + | 528 | WP_135911097.1 | S-fimbrial protein subunit SfaA | VF |
| EGO56_RS21775 () | 65597..66325 | + | 729 | WP_135911098.1 | molecular chaperone | - |
| EGO56_RS21780 () | 66340..68877 | + | 2538 | WP_135911099.1 | Outer membrane usher protein HtrE | VF |
| EGO56_RS21785 () | 68874..70205 | + | 1332 | WP_135911100.1 | fimbrial protein | - |
| EGO56_RS21790 () | 70208..70939 | + | 732 | WP_135911101.1 | molecular chaperone | - |
| EGO56_RS21795 () | 70999..71316 | - | 318 | WP_135911102.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| EGO56_RS21800 () | 71787..72035 | + | 249 | WP_135911103.1 | DUF333 domain-containing protein | - |
| EGO56_RS21805 () | 72715..76875 | + | 4161 | WP_135911104.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| EGO56_RS21810 () | 77064..77267 | - | 204 | WP_135911105.1 | hemolysin | - |
| EGO56_RS21815 () | 77481..77939 | - | 459 | WP_135911106.1 | PACE efflux transporter | - |
| EGO56_RS21820 () | 78563..79573 | - | 1011 | WP_135911107.1 | LacI family DNA-binding transcriptional regulator | - |
| EGO56_RS21825 () | 79681..80694 | + | 1014 | WP_135911108.1 | Gfo/Idh/MocA family oxidoreductase | - |
| EGO56_RS21830 () | 80804..81082 | + | 279 | Protein_65 | hypothetical protein | - |
| EGO56_RS21835 () | 81109..81687 | - | 579 | WP_135911173.1 | YceI family protein | - |
| EGO56_RS21840 () | 82382..83518 | + | 1137 | WP_135911109.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| EGO56_RS21845 () | 83520..84503 | + | 984 | WP_135911110.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| EGO56_RS21850 () | 84500..86479 | + | 1980 | WP_135911111.1 | Bifunctional polymyxin resistance protein ArnA | VF |
| EGO56_RS21855 () | 86479..87381 | + | 903 | WP_135911112.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase | - |
| EGO56_RS21860 () | 87381..89048 | + | 1668 | WP_135911113.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
| EGO56_RS21865 () | 89048..89368 | + | 321 | WP_110332374.1 | EamA family transporter | - |
| EGO56_RS21870 () | 89365..89730 | + | 366 | WP_135911114.1 | 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase | - |
| EGO56_RS21875 () | 89877..91406 | + | 1530 | WP_135911115.1 | Fic family protein | - |
| EGO56_RS21880 () | 91438..92139 | - | 702 | WP_135911116.1 | haloacid dehalogenase type II | - |
| EGO56_RS21885 () | 92382..92867 | - | 486 | WP_135911117.1 | GNAT family N-acetyltransferase | Toxin Detail |
| EGO56_RS21890 () | 92855..93121 | - | 267 | WP_135911118.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| EGO56_RS21895 () | 93230..94036 | - | 807 | WP_135911119.1 | ABC transporter permease | - |
| EGO56_RS21900 () | 94029..94895 | - | 867 | WP_135911120.1 | ABC transporter permease | - |
| EGO56_RS21905 () | 94895..95977 | - | 1083 | WP_135911121.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| EGO56_RS21910 () | 95974..97050 | - | 1077 | WP_135911122.1 | ABC transporter substrate-binding protein | - |
| EGO56_RS21915 () | 97034..99064 | - | 2031 | WP_135911123.1 | hydantoinase B/oxoprolinase family protein | - |
| EGO56_RS21920 () | 99061..101118 | - | 2058 | WP_135911124.1 | hydantoinase/oxoprolinase family protein | - |
| EGO56_RS21925 () | 101330..102805 | + | 1476 | WP_135911125.1 | Sapep family Mn(2+)-dependent dipeptidase | - |
| EGO56_RS21930 () | 102969..103256 | - | 288 | WP_135911126.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EGO56_RS21935 () | 103253..103504 | - | 252 | WP_135911127.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| EGO56_RS21940 () | 103770..104903 | - | 1134 | WP_135911128.1 | glutathione-independent formaldehyde dehydrogenase | - |
| EGO56_RS21945 () | 105263..106210 | - | 948 | WP_135911129.1 | sulfonate ABC transporter substrate-binding protein | - |
| EGO56_RS21950 () | 106306..108195 | - | 1890 | WP_135911130.1 | Transcriptional regulatory protein ZraR | VF |
| EGO56_RS21955 () | 108470..109642 | + | 1173 | WP_033785272.1 | FMNH2-dependent alkanesulfonate monooxygenase | - |
| EGO56_RS21960 () | 109668..111080 | + | 1413 | WP_135911131.1 | FAD/NAD(P)-binding protein | - |
| EGO56_RS21965 () | 111149..112558 | + | 1410 | WP_135911132.1 | LLM class flavin-dependent oxidoreductase | - |
| EGO56_RS21970 () | 112555..113571 | + | 1017 | WP_135911133.1 | Methionine import ATP-binding protein MetN | VF |
| EGO56_RS21975 () | 113568..114272 | + | 705 | WP_135911134.1 | ABC transporter permease | - |
| EGO56_RS21980 () | 114269..115144 | + | 876 | WP_135911135.1 | metal ABC transporter substrate-binding protein | - |
| EGO56_RS21985 () | 115329..116789 | + | 1461 | WP_135911174.1 | MFS transporter | - |
| EGO56_RS21990 () | 116782..117993 | + | 1212 | WP_135911136.1 | monooxygenase | - |
| EGO56_RS21995 () | 119239..120969 | + | 1731 | WP_135911137.1 | type I secretion system permease/ATPase | - |
| EGO56_RS22000 () | 120959..122275 | + | 1317 | WP_135911175.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| EGO56_RS22005 () | 122278..123636 | + | 1359 | WP_135911138.1 | TolC family outer membrane protein | - |
| EGO56_RS22010 () | 123665..125398 | + | 1734 | WP_135911139.1 | Lipase | VF |
| EGO56_RS22015 () | 125456..125929 | - | 474 | WP_135911140.1 | SgcJ/EcaC family oxidoreductase | - |
| EGO56_RS22020 () | 126817..127854 | + | 1038 | WP_135911141.1 | tyrosine-type recombinase/integrase | - |
| EGO56_RS22025 () | 128211..130538 | - | 2328 | WP_135911142.1 | Fe(2+) transporter FeoB | VF |
| EGO56_RS22030 () | 130538..130762 | - | 225 | WP_135911143.1 | FeoA domain-containing protein | - |
| EGO56_RS22035 () | 131370..131651 | + | 282 | WP_135911144.1 | hypothetical protein | - |
| EGO56_RS22040 () | 132363..132743 | - | 381 | WP_135911145.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| EGO56_RS22045 () | 133400..133825 | - | 426 | WP_135911146.1 | DUF1090 family protein | - |
| EGO56_RS22050 () | 134202..134438 | + | 237 | WP_081939994.1 | YgdI/YgdR family lipoprotein | - |
| EGO56_RS22055 () | 134502..135044 | + | 543 | WP_135911147.1 | porin | - |
| EGO56_RS22060 () | 135158..135460 | + | 303 | WP_081939995.1 | hypothetical protein | - |
| EGO56_RS22065 () | 135505..135690 | - | 186 | WP_135911148.1 | DUF2256 domain-containing protein | - |
| EGO56_RS22070 () | 136902..137303 | + | 402 | WP_098049800.1 | H-NS histone family protein | - |
| EGO56_RS22080 () | 138014..139585 | - | 1572 | WP_135911149.1 | sensor domain-containing diguanylate cyclase | - |
| EGO56_RS22085 () | 139860..140261 | + | 402 | WP_135911150.1 | H-NS histone family protein | - |
| EGO56_RS22090 () | 140353..141336 | - | 984 | WP_135911151.1 | HTH-type transcriptional regulator CdhR | VF |
| EGO56_RS22095 () | 141408..142187 | - | 780 | WP_135911152.1 | MBL fold metallo-hydrolase | - |
| EGO56_RS22100 () | 142460..143476 | - | 1017 | WP_135911153.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| EGO56_RS22105 () | 143581..145554 | - | 1974 | WP_135911154.1 | Aerotaxis receptor | VF |
| EGO56_RS22110 () | 145990..146283 | - | 294 | WP_135911155.1 | hypothetical protein | - |
| EGO56_RS22115 () | 146485..146661 | + | 177 | WP_009093122.1 | general stress protein | - |
| EGO56_RS22120 () | 146889..149993 | - | 3105 | WP_135911156.1 | Multidrug resistance protein MexB | VF |
| EGO56_RS22400 () | 150071..150235 | - | 165 | WP_167493469.1 | hypothetical protein | - |
| EGO56_RS22405 () | 150279..150446 | + | 168 | WP_167493470.1 | hypothetical protein | - |
| EGO56_RS22125 () | 150617..150898 | + | 282 | WP_185948894.1 | helix-turn-helix domain-containing protein | - |
| EGO56_RS22130 () | 151016..151363 | + | 348 | WP_013356513.1 | HNH nuclease YajD | - |
| EGO56_RS22135 () | 151408..152145 | - | 738 | WP_135911157.1 | 2-phosphosulfolactate phosphatase | - |
| EGO56_RS22140 () | 152347..152685 | + | 339 | WP_033785317.1 | cupin domain-containing protein | - |
| EGO56_RS22145 () | 153214..155541 | + | 2328 | WP_135911158.1 | FdhF/YdeP family oxidoreductase | - |
| EGO56_RS22150 () | 155780..156895 | + | 1116 | WP_135911159.1 | metallophosphoesterase | - |
| EGO56_RS22155 () | 156971..157771 | + | 801 | WP_135911160.1 | MBL fold metallo-hydrolase | - |
| EGO56_RS22160 () | 157824..159749 | - | 1926 | WP_135911161.1 | Methyl-accepting chemotaxis protein I | VF |
| EGO56_RS22165 () | 160365..162023 | - | 1659 | WP_135911162.1 | Methyl-accepting chemotaxis protein III | VF |
| EGO56_RS22170 () | 162654..162983 | + | 330 | WP_135911163.1 | hypothetical protein | - |
| EGO56_RS22175 () | 163064..163297 | - | 234 | WP_095708319.1 | DNA polymerase V subunit | - |
| EGO56_RS22180 () | 164239..165453 | + | 1215 | WP_135911164.1 | diguanylate phosphodiesterase | - |
| EGO56_RS22185 () | 165627..165836 | + | 210 | WP_010256969.1 | CsbD family protein | - |
| EGO56_RS22190 () | 166038..166802 | + | 765 | WP_135911165.1 | MerR family transcriptional regulator | - |
| EGO56_RS22195 () | 166875..167363 | - | 489 | WP_135911166.1 | Hsp20 family protein | - |
| EGO56_RS22200 () | 167539..167778 | - | 240 | WP_013356499.1 | hypothetical protein | - |
| EGO56_RS22205 () | 168150..168374 | + | 225 | WP_013356498.1 | DUF3606 domain-containing protein | - |
| EGO56_RS22210 () | 168884..170668 | + | 1785 | WP_135911167.1 | GGDEF domain-containing phosphodiesterase | - |
| EGO56_RS22215 () | 170975..172162 | + | 1188 | WP_135911168.1 | diguanylate phosphodiesterase | - |
| EGO56_RS22220 () | 173644..174717 | - | 1074 | WP_135911169.1 | RepB family plasmid replication initiator protein | - |
| EGO56_RS22225 () | 176988..178190 | + | 1203 | WP_013356650.1 | Plasmid partition protein A | VF |
| EGO56_RS22230 () | 178187..179158 | + | 972 | WP_135911170.1 | ParB/RepB/Spo0J family partition protein | - |
| EGO56_RS22235 () | 179379..180305 | + | 927 | WP_135911171.1 | aminoimidazole riboside kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|