MGE detailed information
MGE type: Genomic_island MGE length: 13549 bp
Accession: NZ_CP038499 Location: 2350364..2363912 Organism: Dickeya dianthicola strain LAR.16.03.LID Replicon: chromosome
Accession: NZ_CP038499 Location: 2350364..2363912 Organism: Dickeya dianthicola strain LAR.16.03.LID Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4659_RS10830 (E4659_10965) | 2345625..2345855 | - | 231 | WP_024105826.1 | DNA polymerase III subunit theta | - |
| E4659_RS10835 (E4659_10970) | 2346017..2346397 | + | 381 | WP_024105827.1 | copper homeostasis periplasmic binding protein CopC | - |
| E4659_RS10840 (E4659_10975) | 2346401..2347303 | + | 903 | WP_024108753.1 | copper homeostasis membrane protein CopD | - |
| E4659_RS10845 (E4659_10980) | 2347545..2348054 | + | 510 | WP_024105829.1 | non-heme ferritin | - |
| E4659_RS10850 (E4659_10985) | 2348549..2349187 | + | 639 | WP_223303785.1 | DNA/RNA non-specific endonuclease | - |
| E4659_RS10855 (E4659_10990) | 2349229..2350371 | - | 1143 | WP_024105831.1 | response regulator | - |
| E4659_RS10860 (E4659_10995) | 2350364..2351461 | - | 1098 | WP_024105832.1 | HDOD domain-containing protein | - |
| E4659_RS10865 (E4659_11000) | 2351452..2352567 | - | 1116 | WP_024105833.1 | Sensor histidine kinase RcsC | VF |
| E4659_RS10870 (E4659_11005) | 2352560..2353684 | - | 1125 | WP_024105834.1 | FIST N-terminal domain-containing protein | - |
| E4659_RS10875 (E4659_11020) | 2355129..2356133 | + | 1005 | WP_116587119.1 | IS110 family transposase ISEch4 | Transposase |
| E4659_RS10880 (E4659_11025) | 2356441..2357196 | + | 756 | Protein_2139 | IS256 family transposase IS285 | Transposase |
| E4659_RS10885 (E4659_11030) | 2357292..2357516 | - | 225 | WP_024105836.1 | hypothetical protein | - |
| E4659_RS10890 (E4659_11035) | 2357853..2358254 | + | 402 | WP_024105837.1 | hypothetical protein | - |
| E4659_RS22535 (E4659_11040) | 2358407..2358535 | + | 129 | WP_029729479.1 | hypothetical protein | - |
| E4659_RS10895 (E4659_11045) | 2358800..2359405 | + | 606 | WP_024105838.1 | hypothetical protein | - |
| E4659_RS10900 (E4659_11050) | 2359545..2359778 | + | 234 | WP_024105839.1 | hypothetical protein | - |
| E4659_RS10905 (E4659_11055) | 2360002..2360160 | - | 159 | WP_162928372.1 | hypothetical protein | - |
| E4659_RS10910 (E4659_11060) | 2360668..2361174 | + | 507 | WP_144414575.1 | hypothetical protein | - |
| - | 2361852..2361934 | + | 83 | - | - | Antitoxin Detail |
| - | 2361854..2361934 | - | 81 | - | - | Toxin Detail |
| E4659_RS10915 (E4659_11070) | 2362104..2362442 | - | 339 | WP_024105843.1 | YebY family protein | - |
| E4659_RS10920 (E4659_11075) | 2362916..2363332 | + | 417 | WP_046830401.1 | hypothetical protein | - |
| E4659_RS10925 (E4659_11080) | 2363664..2363912 | + | 249 | WP_024105845.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| E4659_RS10930 (E4659_11085) | 2364174..2365448 | - | 1275 | WP_024105846.1 | YeaH/YhbH family protein | - |
| E4659_RS10935 (E4659_11090) | 2365485..2367419 | - | 1935 | WP_024105847.1 | PrkA family serine protein kinase | - |
| E4659_RS10940 (E4659_11095) | 2367869..2368612 | + | 744 | WP_024108755.1 | MipA/OmpV family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|