MGE detailed information
MGE type: Prophage MGE length: 48462 bp
Accession: NZ_CP038467 Location: 4692366..4740827 Organism: Serratia quinivorans strain PKL:12 Replicon: chromosome
Accession: NZ_CP038467 Location: 4692366..4740827 Organism: Serratia quinivorans strain PKL:12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4343_RS21980 () | 4687718..4688371 | + | 654 | WP_135345003.1 | DUF3313 domain-containing protein | - |
| E4343_RS21985 () | 4688411..4688758 | + | 348 | WP_112348568.1 | DUF3302 domain-containing protein | - |
| E4343_RS21990 () | 4688768..4689903 | + | 1136 | Protein_4254 | HlyD family secretion protein | - |
| E4343_RS21995 () | 4689993..4690463 | - | 471 | WP_167470795.1 | helix-turn-helix domain-containing protein | - |
| E4343_RS22000 () | 4690448..4691796 | - | 1349 | Protein_4256 | type II toxin-antitoxin system HipA family toxin | - |
| E4343_RS24960 () | 4692366..4692755 | - | 390 | Protein_4257 | Putative defective protein IntQ ; Integrase | Integrase |
| E4343_RS24965 () | 4692765..4693229 | - | 465 | Protein_4258 | Putative defective protein IntQ ; Integrase | Integrase |
| E4343_RS22010 () | 4693226..4693414 | - | 189 | WP_115060947.1 | hypothetical protein | - |
| E4343_RS22015 () | 4693417..4693614 | - | 198 | WP_135345005.1 | hypothetical protein | - |
| E4343_RS22020 () | 4693614..4693985 | - | 372 | WP_115058195.1 | hypothetical protein | - |
| E4343_RS22025 () | 4694070..4694456 | - | 387 | WP_135345006.1 | hypothetical protein | - |
| E4343_RS22030 () | 4694456..4694674 | - | 219 | WP_135345007.1 | hypothetical protein | - |
| E4343_RS22035 () | 4694678..4695034 | - | 357 | WP_135345008.1 | hypothetical protein | - |
| E4343_RS22040 () | 4695021..4695347 | - | 327 | WP_135345009.1 | hypothetical protein | - |
| E4343_RS22045 () | 4695426..4695761 | - | 336 | WP_135345010.1 | hypothetical protein | - |
| E4343_RS22050 () | 4695963..4696661 | - | 699 | WP_135345011.1 | LexA family transcriptional regulator | - |
| E4343_RS22055 () | 4696785..4696985 | + | 201 | WP_135345012.1 | hypothetical protein | - |
| E4343_RS22060 () | 4697057..4697881 | + | 825 | WP_135345013.1 | transporter | - |
| E4343_RS22065 () | 4697878..4698060 | + | 183 | WP_135345014.1 | DUF4222 domain-containing protein | - |
| E4343_RS24970 () | 4698141..4698353 | - | 213 | WP_189636430.1 | hypothetical protein | - |
| E4343_RS22075 () | 4698353..4699258 | + | 906 | WP_135345016.1 | hypothetical protein | - |
| E4343_RS22080 () | 4699271..4700149 | + | 879 | WP_135345195.1 | ATP-binding protein | - |
| E4343_RS22085 () | 4700146..4701504 | + | 1359 | WP_135345017.1 | replicative DNA helicase | - |
| E4343_RS22090 () | 4701501..4701866 | + | 366 | WP_135345018.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E4343_RS22095 () | 4701863..4702645 | + | 783 | WP_135345019.1 | antitermination protein | - |
| E4343_RS22105 () | 4703031..4703720 | + | 690 | WP_189636464.1 | protein mom | - |
| E4343_RS22110 () | 4703811..4703987 | + | 177 | WP_098931989.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| E4343_RS22115 () | 4704037..4704444 | + | 408 | WP_135345021.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| E4343_RS22120 () | 4704544..4704921 | + | 378 | WP_135345022.1 | hypothetical protein | - |
| E4343_RS22125 () | 4704911..4705216 | + | 306 | WP_135345023.1 | phage holin family protein | - |
| E4343_RS22130 () | 4705194..4705736 | + | 543 | WP_135345024.1 | glycoside hydrolase family 108 protein | - |
| E4343_RS22135 () | 4705733..4706092 | + | 360 | WP_135345025.1 | DUF2570 family protein | - |
| E4343_RS22140 () | 4706653..4706874 | + | 222 | WP_135345026.1 | hypothetical protein | - |
| E4343_RS22145 () | 4706895..4707092 | + | 198 | WP_135345027.1 | hypothetical protein | - |
| E4343_RS22150 () | 4707323..4707778 | + | 456 | WP_135345028.1 | hypothetical protein | - |
| E4343_RS22155 () | 4707821..4708045 | + | 225 | WP_135345029.1 | hypothetical protein | - |
| E4343_RS22160 () | 4708042..4708380 | + | 339 | WP_135345030.1 | HNH endonuclease | - |
| E4343_RS22165 () | 4708380..4708580 | + | 201 | WP_135345031.1 | hypothetical protein | - |
| E4343_RS22170 () | 4708799..4709263 | + | 465 | WP_135345032.1 | phage terminase small subunit P27 family | - |
| E4343_RS22175 () | 4709217..4710953 | + | 1737 | WP_135345033.1 | terminase large subunit | - |
| E4343_RS22180 () | 4710953..4712221 | + | 1269 | WP_135345034.1 | phage portal protein | - |
| E4343_RS22185 () | 4712239..4712919 | + | 681 | WP_135345035.1 | HK97 family phage prohead protease | - |
| E4343_RS22190 () | 4712921..4714084 | + | 1164 | WP_135345036.1 | phage major capsid protein | - |
| E4343_RS22195 () | 4714127..4714453 | + | 327 | WP_135345037.1 | head-tail connector protein | - |
| E4343_RS22200 () | 4714453..4714779 | + | 327 | WP_135345038.1 | phage head closure protein | - |
| E4343_RS22205 () | 4714776..4715192 | + | 417 | WP_135345039.1 | HK97 gp10 family phage protein | - |
| E4343_RS22210 () | 4715189..4715536 | + | 348 | WP_135345040.1 | DUF3168 domain-containing protein | - |
| E4343_RS22215 () | 4715594..4716313 | + | 720 | WP_135345041.1 | Ig-like domain-containing protein | - |
| E4343_RS22220 () | 4716331..4716753 | + | 423 | WP_135345042.1 | phage tail protein | - |
| E4343_RS22225 () | 4716750..4717040 | + | 291 | WP_135345043.1 | DUF4035 domain-containing protein | - |
| E4343_RS22230 () | 4717073..4720435 | + | 3363 | WP_135345044.1 | phage tail tape measure protein | - |
| E4343_RS22235 () | 4720432..4720785 | + | 354 | WP_135345045.1 | phage tail protein | - |
| E4343_RS22240 () | 4720794..4721543 | + | 750 | WP_135345046.1 | phage minor tail protein L | - |
| E4343_RS22245 () | 4721546..4722247 | + | 702 | WP_135345196.1 | C40 family peptidase | - |
| E4343_RS22250 () | 4722288..4722629 | + | 342 | WP_135345047.1 | hypothetical protein | - |
| E4343_RS22255 () | 4722668..4723282 | + | 615 | WP_135345048.1 | tail assembly protein | - |
| E4343_RS22260 () | 4723343..4726726 | + | 3384 | WP_135345049.1 | DUF1983 domain-containing protein | - |
| E4343_RS22265 () | 4726781..4727131 | + | 351 | Protein_4309 | prophage tail fiber N-terminal domain-containing protein | - |
| E4343_RS22270 () | 4729053..4729823 | + | 771 | WP_135345050.1 | hypothetical protein | - |
| E4343_RS22275 () | 4729880..4730143 | - | 264 | WP_135345051.1 | hypothetical protein | - |
| E4343_RS22285 () | 4730837..4731319 | - | 483 | WP_012146396.1 | SsrA-binding protein SmpB | - |
| E4343_RS22290 () | 4731427..4731915 | + | 489 | WP_071593039.1 | type II toxin-antitoxin system RatA family toxin | - |
| E4343_RS22295 () | 4731908..4732192 | + | 285 | WP_012146394.1 | RnfH family protein | - |
| E4343_RS22300 () | 4732307..4732645 | - | 339 | WP_012146393.1 | outer membrane protein assembly factor BamE | - |
| E4343_RS22305 () | 4732759..4734420 | - | 1662 | WP_189636431.1 | DNA repair protein RecN | VF |
| E4343_RS22310 () | 4734507..4735385 | - | 879 | WP_012146391.1 | NAD(+) kinase | - |
| E4343_RS22315 () | 4735510..4736082 | + | 573 | WP_017893731.1 | nucleotide exchange factor GrpE | - |
| E4343_RS22320 () | 4736133..4736816 | - | 684 | WP_135345052.1 | uracil-DNA glycosylase | - |
| E4343_RS22325 () | 4737161..4737544 | + | 384 | WP_012146388.1 | autonomous glycyl radical cofactor GrcA | - |
| E4343_RS22330 () | 4737731..4738693 | + | 963 | WP_135345053.1 | DUF2974 domain-containing protein | - |
| E4343_RS22335 () | 4738686..4739441 | + | 756 | WP_135345054.1 | Protein PhlB | VF |
| E4343_RS22340 () | 4739502..4740827 | - | 1326 | WP_012146385.1 | ATP-dependent RNA helicase SrmB | - |
| E4343_RS22345 () | 4740960..4741709 | + | 750 | WP_189636432.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| E4343_RS22350 () | 4741750..4743351 | - | 1602 | WP_189636433.1 | L-aspartate oxidase | - |
| E4343_RS22355 () | 4743565..4744140 | + | 576 | WP_012146382.1 | RNA polymerase sigma factor RpoE | - |
| E4343_RS22360 () | 4744171..4744824 | + | 654 | WP_135345057.1 | anti-sigma-E factor RseA | - |
| E4343_RS22365 () | 4744824..4745783 | + | 960 | WP_135345058.1 | sigma-E factor regulatory protein RseB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|