MGE detailed information
MGE type: Genomic_island MGE length: 18528 bp
Accession: NZ_CP038001 Location: 5534145..5552672 Organism: Pseudomonas sp. SXM-1 Replicon: chromosome
Accession: NZ_CP038001 Location: 5534145..5552672 Organism: Pseudomonas sp. SXM-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DCC84_RS26035 () | 5529606..5530889 | + | 1284 | WP_134327172.1 | ABC transporter substrate-binding protein | - |
| DCC84_RS26040 () | 5531360..5532610 | + | 1251 | WP_023659243.1 | ribonucleotide-diphosphate reductase subunit beta | - |
| DCC84_RS26045 () | 5532812..5533795 | + | 984 | WP_134327173.1 | DNA cytosine methyltransferase | - |
| DCC84_RS26050 () | 5533896..5536010 | + | 2115 | WP_134327174.1 | ATP-binding protein | - |
| DCC84_RS26055 () | 5536013..5537329 | + | 1317 | WP_134327175.1 | hypothetical protein | - |
| DCC84_RS26060 () | 5537717..5538867 | + | 1151 | WP_134326149.1 | IS3 family transposase | - |
| DCC84_RS26070 () | 5539442..5540083 | + | 642 | WP_087693117.1 | HAD-IB family hydrolase | - |
| DCC84_RS26075 () | 5540125..5540529 | - | 405 | WP_008432929.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DCC84_RS26080 () | 5540522..5540761 | - | 240 | WP_008432930.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| DCC84_RS26085 () | 5541046..5542005 | - | 960 | WP_102369727.1 | LysR family transcriptional regulator | - |
| DCC84_RS26090 () | 5542268..5543695 | + | 1428 | WP_134327176.1 | argininosuccinate lyase | - |
| DCC84_RS26095 () | 5543834..5544712 | + | 879 | WP_003211504.1 | amino acid ABC transporter permease | - |
| DCC84_RS26100 () | 5544736..5545500 | + | 765 | WP_003211502.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| DCC84_RS26105 () | 5545526..5546347 | + | 822 | WP_008432932.1 | ABC transporter substrate-binding protein | - |
| DCC84_RS26110 () | 5546495..5547664 | + | 1170 | WP_003211499.1 | MFS transporter | - |
| DCC84_RS26115 () | 5547729..5548679 | + | 951 | WP_134327177.1 | hypothetical protein | - |
| DCC84_RS26120 () | 5548692..5549348 | - | 657 | WP_134327178.1 | hypothetical protein | - |
| DCC84_RS26125 () | 5549392..5549754 | - | 363 | WP_134327179.1 | hypothetical protein | - |
| DCC84_RS26130 () | 5549833..5550639 | - | 807 | WP_134327180.1 | sulfite exporter TauE/SafE family protein | - |
| DCC84_RS26135 () | 5550755..5551525 | + | 771 | WP_134327181.1 | HTH-type transcriptional activator RhaR | VF |
| DCC84_RS26140 () | 5551629..5551949 | + | 321 | WP_134327182.1 | helix-turn-helix transcriptional regulator | - |
| DCC84_RS26145 () | 5551997..5552359 | + | 363 | WP_003211487.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DCC84_RS26150 () | 5552334..5552672 | + | 339 | WP_134327183.1 | helix-turn-helix domain-containing protein | - |
| DCC84_RS26155 () | 5552701..5553639 | - | 939 | WP_008432938.1 | GlxA family transcriptional regulator | - |
| DCC84_RS26160 () | 5553756..5554550 | + | 795 | WP_008432939.1 | SDR family oxidoreductase | - |
| DCC84_RS26165 () | 5554557..5555951 | - | 1395 | WP_134327694.1 | peptide amidase | - |
| DCC84_RS26170 () | 5556175..5556939 | - | 765 | WP_134327184.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|