MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 96545 bp
Accession: NZ_CP037876 Location: 1..96545 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain PNCS015054 Replicon: plasmid PNCS015054 strain 4[5]12:i:-
Accession: NZ_CP037876 Location: 1..96545 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain PNCS015054 Replicon: plasmid PNCS015054 strain 4[5]12:i:-
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E1966_RS01335 () | 72..514 | - | 443 | Protein_1 | phospholipase | - |
| E1966_RS01340 () | 680..835 | - | 156 | WP_000983042.1 | hypothetical protein | - |
| E1966_RS01345 () | 848..1132 | - | 285 | WP_000477658.1 | hypothetical protein | - |
| E1966_RS01350 () | 1247..1810 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| E1966_RS01355 () | 1865..2605 | - | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| E1966_RS01360 () | 2625..7883 | - | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| E1966_RS01365 () | 7965..8192 | + | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| E1966_RS01370 () | 8192..8590 | + | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| E1966_RS01375 () | 8599..10761 | - | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| E1966_RS01380 () | 11138..11869 | - | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| E1966_RS01385 () | 11905..12399 | - | 495 | WP_010999946.1 | entry exclusion protein | - |
| E1966_RS01390 () | 12415..15237 | - | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E1966_RS01395 () | 15234..16616 | - | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| E1966_RS01400 () | 16606..17154 | - | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E1966_RS01405 () | 17141..17434 | - | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| E1966_RS01410 () | 17648..18397 | - | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E1966_RS01415 () | 18409..18624 | - | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| E1966_RS01420 () | 18635..20461 | - | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E1966_RS01425 () | 20458..20877 | - | 420 | WP_001229397.1 | HNH endonuclease | - |
| E1966_RS01430 () | 20914..21552 | - | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E1966_RS01435 () | 21537..21845 | - | 309 | WP_010999945.1 | hypothetical protein | - |
| E1966_RS01440 () | 21864..22856 | - | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| E1966_RS01445 () | 22853..23485 | - | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| E1966_RS01450 () | 23482..23868 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| E1966_RS01455 () | 23843..26491 | - | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| E1966_RS01460 () | 26507..26770 | - | 264 | WP_001239255.1 | hypothetical protein | - |
| E1966_RS01465 () | 26887..27354 | - | 468 | WP_000549562.1 | hypothetical protein | - |
| E1966_RS01470 () | 27347..27568 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| E1966_RS01475 () | 27703..28218 | - | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E1966_RS01480 () | 28215..28460 | - | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| E1966_RS01485 () | 28438..29034 | - | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| E1966_RS01490 () | 29024..30445 | - | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| E1966_RS01495 () | 30445..31185 | - | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| E1966_RS01500 () | 31172..31738 | - | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| E1966_RS01505 () | 31760..32071 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| E1966_RS01510 () | 32086..32448 | - | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| E1966_RS01515 () | 32490..32717 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| E1966_RS01520 () | 32811..33497 | - | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| E1966_RS01525 () | 33690..34070 | - | 381 | WP_136571529.1 | relaxosome protein TraM | - |
| E1966_RS01530 () | 34485..34955 | + | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| E1966_RS25055 () | 35266..36084 | - | 819 | Protein_41 | DUF945 domain-containing protein | - |
| E1966_RS25060 () | 36187..36345 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| E1966_RS01545 () | 36594..37331 | - | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| E1966_RS01550 () | 37328..37762 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| E1966_RS01555 () | 37802..39799 | - | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| E1966_RS01560 () | 39868..40110 | - | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| E1966_RS01565 () | 40165..40683 | - | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| E1966_RS01575 () | 41390..41713 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| E1966_RS01580 () | 41949..42383 | - | 435 | WP_000274533.1 | DUF1380 family protein | - |
| E1966_RS01585 () | 42450..42884 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| E1966_RS01595 () | 43380..44144 | - | 765 | WP_001246548.1 | membrane protein | - |
| E1966_RS01600 () | 44216..44629 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| E1966_RS01605 () | 44685..44906 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| E1966_RS01610 () | 44906..45586 | - | 681 | WP_000088645.1 | DNA methylase | - |
| E1966_RS01615 () | 45968..46324 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| E1966_RS01620 () | 46317..46787 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| E1966_RS01625 () | 47298..47720 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| E1966_RS01630 () | 47720..48994 | + | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| E1966_RS01635 () | 49076..50050 | - | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| E1966_RS01640 () | 50050..51255 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| E1966_RS01645 () | 51670..52611 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E1966_RS01650 () | 52643..53209 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| E1966_RS01655 () | 53266..53601 | - | 336 | WP_001527010.1 | hypothetical protein | - |
| E1966_RS01660 () | 53785..54201 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| E1966_RS01665 () | 54287..55402 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| E1966_RS01670 () | 55661..56149 | + | 489 | WP_001135407.1 | hypothetical protein | - |
| E1966_RS01675 () | 56804..57544 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| E1966_RS01680 () | 57751..58311 | + | 561 | WP_001240331.1 | recombinase family protein | - |
| E1966_RS01685 () | 58295..59959 | + | 1665 | WP_000098783.1 | IS481 family transposase | - |
| E1966_RS01690 () | 59892..60917 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| E1966_RS01695 () | 61106..62143 | - | 1038 | WP_001121399.1 | IS630 family transposase | - |
| E1966_RS01700 () | 62752..63645 | + | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| E1966_RS01705 () | 63819..63983 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| E1966_RS01710 () | 64157..64924 | + | 768 | WP_001526990.1 | virulence protein SpvA | - |
| E1966_RS25065 () | 64887..65054 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| E1966_RS01715 () | 65106..66881 | + | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| E1966_RS01720 () | 67162..67887 | + | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| E1966_RS01725 () | 68148..68798 | + | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| E1966_RS01730 () | 68925..69349 | - | 425 | Protein_79 | IS200/IS605 family transposase | - |
| E1966_RS01735 () | 69406..69756 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| E1966_RS01740 () | 69823..70383 | - | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| E1966_RS25070 () | 70539..70826 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| E1966_RS01745 () | 71103..71588 | - | 486 | WP_000905606.1 | membrane protein | - |
| E1966_RS01750 () | 71582..72091 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| E1966_RS01755 () | 72095..72808 | - | 714 | Protein_85 | EAL domain-containing protein | - |
| E1966_RS01760 () | 72817..73599 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| E1966_RS01765 () | 73634..74155 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| E1966_RS01770 () | 74152..74442 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| E1966_RS01775 () | 74444..74749 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E1966_RS01780 () | 74751..74969 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E1966_RS01785 () | 75645..76166 | + | 522 | WP_010999942.1 | hypothetical protein | - |
| E1966_RS01790 () | 76650..76946 | + | 297 | WP_001687482.1 | hypothetical protein | - |
| E1966_RS01795 () | 77440..78429 | + | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| E1966_RS01800 () | 78688..79132 | - | 445 | Protein_94 | site-specific integrase | - |
| E1966_RS01805 () | 79301..79682 | - | 382 | Protein_95 | YgiW/YdeI family stress tolerance OB fold protein | - |
| E1966_RS01810 () | 80401..80703 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| E1966_RS01815 () | 80978..81496 | + | 519 | WP_000748205.1 | major pilin PefA | - |
| E1966_RS01820 () | 81724..84132 | + | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| E1966_RS01825 () | 84125..84817 | + | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| E1966_RS01830 () | 84832..85389 | + | 558 | WP_010999940.1 | membrane protein | - |
| E1966_RS01835 () | 85642..86517 | + | 876 | WP_014343944.1 | hypothetical protein | - |
| E1966_RS01840 () | 86949..87161 | + | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| E1966_RS01845 () | 87146..87496 | + | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| E1966_RS01850 () | 87741..88394 | + | 654 | WP_000178592.1 | DsbA family protein | - |
| E1966_RS25075 () | 88384..88530 | + | 147 | WP_001192557.1 | hypothetical protein | - |
| E1966_RS01855 () | 88527..89426 | + | 900 | WP_010999938.1 | YjiK family protein | - |
| E1966_RS01860 () | 89516..90073 | + | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| E1966_RS01865 () | 90340..91098 | + | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| E1966_RS01870 () | 91195..91416 | - | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| E1966_RS01875 () | 92276..93157 | - | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| E1966_RS01880 () | 93138..93215 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| E1966_RS01885 () | 93465..93731 | - | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| E1966_RS01890 () | 93963..94640 | + | 678 | WP_001339397.1 | IS66 family insertion sequence hypothetical protein | - |
| E1966_RS01895 () | 94640..94987 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|