MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 117040 bp
Accession: NZ_CP035254 Location: 979561..1096600 Organism: Streptococcus pneumoniae strain TVO_1901932 Replicon: chromosome
Accession: NZ_CP035254 Location: 979561..1096600 Organism: Streptococcus pneumoniae strain TVO_1901932 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH26_RS04955 (EQH26_05275) | 974778..975617 | + | 840 | WP_000761910.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| EQH26_RS04960 (EQH26_05280) | 975601..976203 | + | 603 | WP_000567066.1 | L-threonylcarbamoyladenylate synthase | - |
| EQH26_RS04965 (EQH26_05285) | 976205..976636 | + | 432 | WP_000942930.1 | GNAT family N-acetyltransferase | - |
| EQH26_RS04970 (EQH26_05290) | 976698..977954 | + | 1257 | WP_000575512.1 | serine hydroxymethyltransferase | - |
| EQH26_RS04975 (EQH26_05295) | 977962..978936 | + | 975 | WP_000356089.1 | nucleoid-associated protein | - |
| EQH26_RS04980 (EQH26_05300) | 978936..979550 | + | 615 | WP_000476375.1 | cell wall hydrolase Pmp23 | - |
| EQH26_RS04985 (EQH26_05305) | 979624..980598 | + | 975 | WP_001227763.1 | DUF1002 domain-containing protein | - |
| EQH26_RS04990 (EQH26_05310) | 980672..982303 | + | 1632 | WP_000914594.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| EQH26_RS04995 (EQH26_05315) | 982517..982795 | + | 279 | WP_000710803.1 | hypothetical protein | - |
| EQH26_RS05000 (EQH26_05320) | 983041..983259 | + | 219 | WP_001207345.1 | helix-turn-helix transcriptional regulator | - |
| EQH26_RS05005 (EQH26_05330) | 983652..984677 | + | 1026 | WP_000790746.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| EQH26_RS05010 (EQH26_05335) | 984667..985674 | + | 1008 | WP_001244693.1 | Ferric enterobactin transport system permease protein FepD | VF |
| EQH26_RS05015 (EQH26_05340) | 985674..986681 | + | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| EQH26_RS05020 (EQH26_05345) | 986681..987475 | + | 795 | WP_000677520.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| EQH26_RS05025 | 987626..987810 | + | 185 | Protein_999 | IS3 family transposase | - |
| EQH26_RS05030 (EQH26_05350) | 987929..988252 | + | 324 | WP_233277683.1 | restriction endonuclease subunit S | - |
| EQH26_RS05035 (EQH26_05360) | 989214..989375 | + | 162 | WP_000368175.1 | hypothetical protein | - |
| EQH26_RS05040 (EQH26_05365) | 989467..991146 | + | 1680 | WP_000031823.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| EQH26_RS05045 (EQH26_05370) | 991414..991980 | + | 567 | WP_000234983.1 | hypothetical protein | - |
| EQH26_RS05050 (EQH26_05375) | 992302..992490 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| EQH26_RS05055 (EQH26_05380) | 992552..993310 | + | 759 | WP_000262004.1 | ATP-grasp domain-containing protein | - |
| EQH26_RS05060 (EQH26_05385) | 993368..994222 | + | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
| EQH26_RS05065 (EQH26_05390) | 994334..995218 | + | 885 | WP_000710115.1 | diacylglycerol kinase family lipid kinase | - |
| EQH26_RS05070 (EQH26_05395) | 995381..997119 | + | 1739 | Protein_1008 | glycoside hydrolase family 13 protein | - |
| EQH26_RS05075 (EQH26_05400) | 997394..997849 | + | 456 | WP_000500474.1 | hypothetical protein | - |
| EQH26_RS05080 (EQH26_05405) | 998294..998770 | + | 477 | WP_000579613.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| EQH26_RS05085 (EQH26_05410) | 998770..999531 | + | 762 | WP_000405362.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| EQH26_RS05090 | 999559..999849 | + | 291 | WP_001213954.1 | hypothetical protein | - |
| EQH26_RS05095 | 999843..1001102 | + | 1260 | WP_001816651.1 | AAA family ATPase | - |
| EQH26_RS05100 | 1001299..1002042 | + | 744 | WP_001154376.1 | hypothetical protein | - |
| EQH26_RS05105 (EQH26_05420) | 1002863..1003222 | + | 360 | WP_000003748.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| EQH26_RS05110 (EQH26_05425) | 1003232..1003597 | + | 366 | WP_000263055.1 | plasmid mobilization relaxosome protein MobC | - |
| EQH26_RS05115 (EQH26_05430) | 1003584..1005419 | + | 1836 | Protein_1017 | SAG1250 family conjugative relaxase | - |
| EQH26_RS05120 (EQH26_05440) | 1005685..1006650 | + | 966 | WP_000974693.1 | D-alanine--D-alanine ligase | - |
| EQH26_RS05125 (EQH26_05445) | 1006715..1006951 | + | 237 | WP_000691720.1 | hypothetical protein | - |
| EQH26_RS05130 (EQH26_05450) | 1007049..1007171 | + | 123 | Protein_1020 | ISL3 family transposase | - |
| EQH26_RS05135 (EQH26_05460) | 1007434..1007862 | + | 429 | WP_000348720.1 | GNAT family N-acetyltransferase | - |
| EQH26_RS05140 (EQH26_05465) | 1007920..1008528 | + | 609 | WP_000662935.1 | Type 1 glutamine amidotransferase-like domain-containing protein | - |
| EQH26_RS05145 (EQH26_05470) | 1008810..1009058 | + | 249 | WP_000335280.1 | aminoglycoside phosphotransferase | - |
| EQH26_RS05150 (EQH26_05475) | 1009163..1009465 | + | 303 | Protein_1024 | IS5 family transposase IS1381A | Transposase |
| EQH26_RS05155 (EQH26_05480) | 1009621..1010850 | + | 1230 | WP_000703352.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| EQH26_RS05160 (EQH26_05485) | 1010870..1013566 | + | 2697 | WP_000058191.1 | phosphoenolpyruvate carboxylase | - |
| EQH26_RS05165 (EQH26_05490) | 1013979..1014983 | + | 1005 | WP_000792167.1 | hypothetical protein | VF |
| EQH26_RS05170 (EQH26_05495) | 1015052..1015918 | + | 867 | WP_000637238.1 | ABC transporter permease | - |
| EQH26_RS05175 (EQH26_05500) | 1015915..1016673 | + | 759 | WP_000125408.1 | ABC transporter ATP-binding protein | - |
| EQH26_RS05180 (EQH26_05505) | 1016763..1018523 | + | 1761 | WP_000227894.1 | DNA primase | - |
| EQH26_RS05185 (EQH26_05510) | 1018526..1019635 | + | 1110 | WP_000201898.1 | RNA polymerase sigma factor RpoD | - |
| EQH26_RS05190 (EQH26_05515) | 1019649..1019978 | + | 330 | WP_000331928.1 | metal-sulfur cluster assembly factor | - |
| EQH26_RS05195 (EQH26_05520) | 1020093..1021136 | + | 1044 | WP_000412280.1 | alpha-galactosylglucosyldiacylglycerol synthase | - |
| EQH26_RS05200 (EQH26_05525) | 1021152..1022477 | + | 1326 | WP_001219430.1 | glycosyltransferase family 4 protein | - |
| EQH26_RS05205 (EQH26_05530) | 1022508..1022684 | + | 177 | WP_001256255.1 | PspC domain-containing protein | - |
| EQH26_RS05210 (EQH26_05535) | 1022743..1022877 | + | 135 | WP_000863859.1 | DUF4044 domain-containing protein | - |
| EQH26_RS05215 (EQH26_05540) | 1022941..1024251 | + | 1311 | WP_000061640.1 | GTPase ObgE | - |
| EQH26_RS05220 (EQH26_05545) | 1024261..1024419 | + | 159 | WP_001808548.1 | hypothetical protein | - |
| EQH26_RS05225 (EQH26_05550) | 1025507..1026766 | + | 1260 | WP_001227083.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| EQH26_RS05230 (EQH26_05555) | 1026782..1027333 | + | 552 | WP_001028733.1 | GNAT family N-acetyltransferase | - |
| EQH26_RS05235 (EQH26_05560) | 1027326..1028603 | + | 1278 | WP_000033830.1 | CBS-HotDog domain-containing transcription factor SpxR | - |
| EQH26_RS05240 (EQH26_05565) | 1028619..1029479 | + | 861 | WP_000631543.1 | methionyl aminopeptidase | - |
| EQH26_RS05245 (EQH26_05575) | 1029860..1030663 | + | 804 | Protein_1043 | IS5 family transposase ISSpn7 | Transposase |
| EQH26_RS05250 (EQH26_05580) | 1030854..1033145 | + | 2292 | WP_000992865.1 | DNA helicase PcrA | - |
| EQH26_RS05255 (EQH26_05585) | 1033188..1033868 | + | 681 | WP_000286935.1 | DNA repair protein RadC | - |
| EQH26_RS05260 (EQH26_05590) | 1033865..1034554 | - | 690 | WP_000743330.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| EQH26_RS05265 (EQH26_05595) | 1034572..1035213 | - | 642 | WP_000653403.1 | redox-sensing transcriptional repressor Rex | - |
| EQH26_RS05270 (EQH26_05600) | 1035296..1035511 | - | 216 | WP_000462488.1 | DUF4649 family protein | - |
| EQH26_RS05275 (EQH26_05605) | 1035519..1035866 | - | 348 | WP_000863509.1 | DUF1831 domain-containing protein | - |
| EQH26_RS05280 (EQH26_05610) | 1035871..1036986 | - | 1116 | WP_000639670.1 | cysteine desulfurase family protein | - |
| EQH26_RS05285 (EQH26_05615) | 1036996..1037955 | - | 960 | WP_001283813.1 | ribose-phosphate diphosphokinase | - |
| EQH26_RS05290 (EQH26_05620) | 1038068..1038637 | - | 570 | WP_000681287.1 | CYTH domain-containing protein | - |
| EQH26_RS05295 (EQH26_05625) | 1038765..1039436 | + | 672 | WP_000171676.1 | GTP pyrophosphokinase family protein | - |
| EQH26_RS05300 (EQH26_05630) | 1039420..1040238 | + | 819 | WP_000799053.1 | NAD kinase | - |
| EQH26_RS05305 (EQH26_05635) | 1040235..1041131 | + | 897 | WP_001210007.1 | RluA family pseudouridine synthase | - |
| EQH26_RS05310 (EQH26_05640) | 1041175..1042149 | + | 975 | WP_000451584.1 | phosphate acetyltransferase | - |
| EQH26_RS05315 (EQH26_05645) | 1042410..1043736 | - | 1327 | Protein_1057 | ISL3 family transposase | - |
| EQH26_RS05320 (EQH26_05650) | 1043918..1044217 | - | 300 | WP_000981526.1 | YbaB/EbfC family nucleoid-associated protein | - |
| EQH26_RS05325 (EQH26_05655) | 1044619..1045302 | + | 684 | WP_000509040.1 | YoaK family protein | - |
| EQH26_RS05330 (EQH26_05660) | 1045504..1045818 | + | 315 | WP_000109141.1 | 50S ribosomal protein L21 | - |
| EQH26_RS05335 (EQH26_05665) | 1045834..1046178 | + | 345 | WP_000613699.1 | ribosomal-processing cysteine protease Prp | - |
| EQH26_RS05340 (EQH26_05670) | 1046195..1046488 | + | 294 | WP_000916509.1 | 50S ribosomal protein L27 | - |
| EQH26_RS05345 (EQH26_05675) | 1046834..1047004 | - | 171 | WP_000123638.1 | hypothetical protein | - |
| EQH26_RS05350 (EQH26_05680) | 1047441..1048358 | + | 918 | WP_000587444.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| EQH26_RS05355 (EQH26_05685) | 1048451..1049299 | - | 849 | WP_000592056.1 | YitT family protein | - |
| EQH26_RS05360 (EQH26_05690) | 1049441..1050280 | + | 840 | WP_000161400.1 | DegV family protein | - |
| EQH26_RS05365 (EQH26_05695) | 1050387..1050662 | + | 276 | WP_001284639.1 | HU family DNA-binding protein | - |
| EQH26_RS05370 (EQH26_05700) | 1051092..1052993 | + | 1902 | WP_000584855.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| EQH26_RS05375 (EQH26_05705) | 1052996..1053859 | + | 864 | WP_000400566.1 | XRE/MutR family transcriptional regulator | - |
| EQH26_RS05380 (EQH26_05710) | 1053939..1054991 | + | 1053 | WP_054369602.1 | MFS transporter | - |
| EQH26_RS05385 (EQH26_05715) | 1055084..1057042 | + | 1959 | WP_001042565.1 | NAD-dependent DNA ligase LigA | - |
| EQH26_RS05390 (EQH26_05720) | 1057154..1059433 | + | 2280 | WP_000283071.1 | type I pullulanase | - |
| EQH26_RS05395 (EQH26_05725) | 1059978..1061402 | + | 1425 | WP_000199375.1 | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase | - |
| EQH26_RS05400 (EQH26_05735) | 1061882..1063810 | + | 1929 | WP_000370263.1 | 1,4-alpha-glucan branching protein GlgB | - |
| EQH26_RS05405 (EQH26_05740) | 1063800..1064942 | + | 1143 | WP_000787276.1 | glucose-1-phosphate adenylyltransferase | - |
| EQH26_RS05410 (EQH26_05745) | 1064932..1066071 | + | 1140 | WP_000687059.1 | glucose-1-phosphate adenylyltransferase subunit GlgD | - |
| EQH26_RS05415 (EQH26_05750) | 1066068..1067501 | + | 1434 | WP_000697295.1 | glycogen synthase GlgA | - |
| EQH26_RS05420 | 1067560..1067901 | + | 342 | WP_001818460.1 | Phosphoserine phosphatase | VF |
| EQH26_RS05425 | 1068002..1068205 | + | 204 | WP_186004740.1 | HAD hydrolase family protein | - |
| EQH26_RS05430 (EQH26_05760) | 1068214..1069329 | + | 1116 | WP_000706411.1 | glycerate kinase | - |
| EQH26_RS05435 (EQH26_05765) | 1069326..1069772 | - | 447 | WP_000131076.1 | YueI family protein | - |
| EQH26_RS05440 (EQH26_05770) | 1069936..1071240 | + | 1305 | WP_000022815.1 | phosphopyruvate hydratase | - |
| EQH26_RS05445 (EQH26_05775) | 1071378..1071758 | - | 381 | WP_001817933.1 | tyrosine-type recombinase/integrase | - |
| EQH26_RS05450 (EQH26_05780) | 1071724..1072570 | - | 847 | Protein_1084 | IS630 family transposase | - |
| EQH26_RS05455 (EQH26_05790) | 1072741..1072896 | + | 156 | Protein_1085 | diacylglycerol kinase family lipid kinase | - |
| EQH26_RS05460 (EQH26_05795) | 1073096..1076371 | + | 3276 | WP_000772354.1 | ATP-dependent nuclease subunit B | - |
| EQH26_RS05465 (EQH26_05800) | 1076368..1080018 | + | 3651 | WP_000767251.1 | helicase-exonuclease AddAB subunit AddA | - |
| EQH26_RS05470 (EQH26_05810) | 1080188..1081366 | + | 1179 | WP_000174781.1 | hypothetical protein | - |
| EQH26_RS05475 (EQH26_05815) | 1081575..1087160 | + | 5586 | WP_238126546.1 | Immunoglobulin A1 protease | VF |
| EQH26_RS05480 (EQH26_05825) | 1087607..1088458 | + | 852 | WP_000201299.1 | Ribosome biogenesis GTPase A | VF |
| EQH26_RS05485 (EQH26_05830) | 1088445..1089224 | + | 780 | WP_000201095.1 | ribonuclease HII | - |
| EQH26_RS05490 (EQH26_05835) | 1089240..1090790 | + | 1551 | WP_000392555.1 | ClC family H(+)/Cl(-) exchange transporter | - |
| EQH26_RS05495 (EQH26_05840) | 1091374..1092444 | + | 1071 | WP_000817878.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| EQH26_RS05500 (EQH26_05845) | 1092517..1093506 | - | 990 | WP_000873992.1 | Lipoate-protein ligase LplJ | VF |
| EQH26_RS05505 (EQH26_05850) | 1093570..1095273 | - | 1704 | WP_001162925.1 | dihydrolipoyl dehydrogenase | - |
| EQH26_RS05510 (EQH26_05855) | 1095319..1096362 | - | 1044 | WP_000752697.1 | dihydrolipoamide acetyltransferase | - |
| EQH26_RS05515 (EQH26_05860) | 1096580..1097572 | - | 993 | WP_000448724.1 | alpha-ketoacid dehydrogenase subunit beta | - |
| EQH26_RS05520 (EQH26_05865) | 1097588..1098556 | - | 969 | WP_000105360.1 | thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha | - |
| EQH26_RS05525 (EQH26_05870) | 1098710..1100071 | - | 1362 | WP_000278537.1 | sodium-coupled multidrug efflux MATE transporter PdrM | - |
| EQH26_RS05530 (EQH26_05875) | 1100082..1100342 | - | 261 | WP_001105925.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|