MGE detailed information
MGE type: Genomic_island MGE length: 34965 bp
Accession: NZ_CP035238 Location: 1002490..1037454 Organism: Streptococcus pneumoniae strain TVO_D39 Replicon: chromosome
Accession: NZ_CP035238 Location: 1002490..1037454 Organism: Streptococcus pneumoniae strain TVO_D39 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH42_RS04925 (EQH42_05220) | 999479..1000708 | - | 1230 | WP_000703358.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| EQH42_RS04930 (EQH42_05225) | 1000852..1001162 | - | 311 | Protein_986 | transposase family protein | - |
| EQH42_RS04935 (EQH42_05235) | 1001610..1001831 | - | 222 | WP_000286251.1 | helix-turn-helix transcriptional regulator | - |
| EQH42_RS04940 (EQH42_05240) | 1002490..1003701 | - | 1212 | WP_000687010.1 | MFS transporter | - |
| EQH42_RS04945 (EQH42_05245) | 1004084..1004728 | - | 645 | WP_000270072.1 | acetyltransferase | - |
| EQH42_RS04950 (EQH42_05250) | 1004747..1005946 | - | 1200 | WP_000238677.1 | ATP-grasp domain-containing protein | - |
| EQH42_RS04955 (EQH42_05255) | 1005961..1006911 | - | 951 | WP_000389975.1 | hypothetical protein | - |
| EQH42_RS04960 (EQH42_05260) | 1006901..1008124 | - | 1224 | WP_000252068.1 | ATP phosphoribosyltransferase regulatory subunit | - |
| EQH42_RS04965 (EQH42_05265) | 1008126..1009421 | - | 1296 | WP_000609550.1 | AMP-binding protein | - |
| EQH42_RS04970 (EQH42_05270) | 1009444..1010550 | - | 1107 | WP_000444113.1 | hypothetical protein | - |
| EQH42_RS04975 | 1010579..1011775 | - | 1197 | WP_238097390.1 | hypothetical protein | - |
| EQH42_RS04980 | 1011775..1012470 | - | 696 | WP_238097392.1 | hypothetical protein | - |
| EQH42_RS04985 | 1012493..1012804 | - | 312 | WP_225351524.1 | hypothetical protein | - |
| EQH42_RS04990 | 1012858..1013274 | - | 417 | WP_238097393.1 | sugar phosphate isomerase/epimerase | - |
| EQH42_RS04995 (EQH42_05285) | 1013284..1013892 | - | 609 | WP_000709470.1 | PIG-L family deacetylase | - |
| EQH42_RS05000 (EQH42_05290) | 1013894..1015189 | - | 1296 | WP_000794307.1 | nucleotide sugar dehydrogenase | - |
| EQH42_RS05005 | 1015289..1015360 | - | 72 | WP_001809668.1 | peptide pheromone SHP3 | - |
| EQH42_RS05010 (EQH42_05295) | 1015441..1016295 | + | 855 | WP_000837499.1 | XRE/MutR family transcriptional regulator | - |
| EQH42_RS05015 | 1016340..1018225 | - | 1886 | Protein_1003 | SAG1250 family conjugative relaxase | - |
| EQH42_RS05020 (EQH42_05315) | 1018248..1018577 | - | 330 | WP_000263037.1 | plasmid mobilization relaxosome protein MobC | - |
| EQH42_RS05025 (EQH42_05320) | 1018587..1018946 | - | 360 | WP_000529543.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| EQH42_RS05030 | 1019778..1020155 | - | 378 | WP_000530001.1 | hypothetical protein | - |
| EQH42_RS05035 (EQH42_05330) | 1020158..1020934 | - | 777 | WP_001821017.1 | hypothetical protein | - |
| EQH42_RS05040 (EQH42_05335) | 1020962..1021723 | - | 762 | WP_000405357.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| EQH42_RS05045 (EQH42_05340) | 1021723..1022199 | - | 477 | WP_000579612.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| EQH42_RS05050 | 1022644..1023099 | - | 456 | Protein_1010 | hypothetical protein | - |
| EQH42_RS05055 (EQH42_05355) | 1023374..1025113 | - | 1740 | WP_000423451.1 | glycoside hydrolase family 13 protein | - |
| EQH42_RS05060 (EQH42_05360) | 1025276..1026160 | - | 885 | WP_000710119.1 | diacylglycerol kinase family lipid kinase | - |
| EQH42_RS05065 (EQH42_05365) | 1026272..1027126 | - | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
| EQH42_RS05070 (EQH42_05370) | 1027126..1027941 | - | 816 | WP_000262006.1 | ATP-grasp domain-containing protein | - |
| EQH42_RS05075 (EQH42_05375) | 1028003..1028191 | - | 189 | WP_000179769.1 | hypothetical protein | - |
| EQH42_RS05080 (EQH42_05380) | 1028513..1029079 | - | 567 | WP_000234985.1 | hypothetical protein | - |
| EQH42_RS05085 (EQH42_05385) | 1029347..1031026 | - | 1680 | WP_000031832.1 | recombinase family protein | - |
| EQH42_RS05090 (EQH42_05390) | 1031118..1031279 | - | 162 | WP_000368174.1 | hypothetical protein | - |
| EQH42_RS05095 | 1031963..1032262 | - | 300 | Protein_1019 | hypothetical protein | - |
| EQH42_RS05100 (EQH42_05400) | 1032243..1032566 | - | 324 | WP_229294054.1 | restriction endonuclease subunit S | - |
| EQH42_RS05105 | 1032685..1032855 | - | 171 | Protein_1021 | IS3 family transposase | - |
| EQH42_RS05110 (EQH42_05405) | 1033020..1033814 | - | 795 | WP_000677519.1 | ABC transporter ATP-binding protein | - |
| EQH42_RS05115 (EQH42_05410) | 1033814..1034821 | - | 1008 | WP_001180357.1 | iron ABC transporter permease | - |
| EQH42_RS05120 (EQH42_05415) | 1034821..1035828 | - | 1008 | WP_001244692.1 | iron ABC transporter permease | - |
| EQH42_RS05125 (EQH42_05420) | 1035818..1036843 | - | 1026 | WP_000790743.1 | ABC transporter substrate-binding protein | - |
| EQH42_RS05130 (EQH42_05430) | 1037236..1037454 | - | 219 | WP_000885335.1 | helix-turn-helix transcriptional regulator | - |
| EQH42_RS05135 (EQH42_05435) | 1037700..1037978 | - | 279 | WP_000710803.1 | hypothetical protein | - |
| EQH42_RS05140 (EQH42_05440) | 1038192..1039823 | - | 1632 | WP_000914581.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| EQH42_RS05145 (EQH42_05445) | 1039897..1040871 | - | 975 | WP_001227739.1 | DUF1002 domain-containing protein | - |
| EQH42_RS05150 (EQH42_05450) | 1040945..1041559 | - | 615 | WP_000476388.1 | cell wall hydrolase Pmp23 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus pneumoniae R6 | Genomic island | TA6282 | NC_003098 | 920239..953000 | 0.001 |