MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 105369 bp
Accession: NZ_CP034291 Location: 1..105369 Organism: Vibrio parahaemolyticus strain 20140722001-1 Replicon: plasmid pVPCZ2014-1
Accession: NZ_CP034291 Location: 1..105369 Organism: Vibrio parahaemolyticus strain 20140722001-1 Replicon: plasmid pVPCZ2014-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EHC64_RS25885 () | 153..530 | + | 378 | WP_159408182.1 | hypothetical protein | - |
| EHC64_RS25890 () | 508..834 | + | 327 | WP_159408183.1 | hypothetical protein | - |
| EHC64_RS25895 () | 986..1579 | - | 594 | WP_025789626.1 | hypothetical protein | - |
| EHC64_RS25900 () | 1591..2169 | - | 579 | WP_086370927.1 | hypothetical protein | - |
| EHC64_RS25905 () | 2213..3670 | - | 1458 | WP_159408184.1 | DUF1738 domain-containing protein | - |
| EHC64_RS25910 () | 3663..3842 | - | 180 | WP_140060184.1 | hypothetical protein | - |
| EHC64_RS25915 () | 3835..4344 | - | 510 | WP_140060183.1 | Type IV secretion system protein virB1 | VF |
| EHC64_RS25920 () | 4347..4859 | - | 513 | WP_140060182.1 | restriction endonuclease | - |
| EHC64_RS25925 () | 4910..7114 | - | 2205 | WP_140065307.1 | DNA topoisomerase 3 | - |
| EHC64_RS25930 () | 7268..7708 | - | 441 | WP_086370918.1 | hypothetical protein | - |
| EHC64_RS25935 () | 7723..8259 | - | 537 | WP_140060181.1 | conjugative transfer signal peptidase TraF | - |
| EHC64_RS25940 () | 8256..10205 | - | 1950 | WP_140065305.1 | type IV secretory system conjugative DNA transfer family protein | - |
| EHC64_RS25945 () | 10405..10800 | + | 396 | WP_140060180.1 | hypothetical protein | - |
| EHC64_RS25950 () | 11298..11828 | - | 531 | WP_140342775.1 | Outer membrane porin F | VF |
| EHC64_RS25955 () | 11961..12413 | - | 453 | WP_140342774.1 | hypothetical protein | - |
| EHC64_RS25960 () | 12505..13656 | - | 1152 | WP_140342776.1 | conjugal transfer protein TrbI | - |
| EHC64_RS25965 () | 13781..14206 | - | 426 | WP_086597983.1 | hypothetical protein | - |
| EHC64_RS25970 () | 14215..15147 | - | 933 | WP_140342773.1 | P-type conjugative transfer protein TrbG | - |
| EHC64_RS25975 () | 15165..15881 | - | 717 | WP_025789609.1 | type IV secretion system protein | - |
| EHC64_RS25980 () | 15826..17634 | - | 1809 | WP_159408185.1 | P-type conjugative transfer protein TrbL | - |
| EHC64_RS25985 () | 17604..17825 | - | 222 | WP_140342771.1 | hypothetical protein | - |
| EHC64_RS25990 () | 17840..18616 | - | 777 | WP_140342770.1 | P-type conjugative transfer protein TrbJ | - |
| EHC64_RS25995 () | 18603..21014 | - | 2412 | WP_140342769.1 | conjugal transfer protein TrbE | - |
| EHC64_RS26000 () | 21011..21304 | - | 294 | WP_025789605.1 | VirB3 family type IV secretion system protein | - |
| EHC64_RS26005 () | 21316..21690 | - | 375 | WP_140342768.1 | TrbC/VirB2 family protein | - |
| EHC64_RS26010 () | 21836..22042 | - | 207 | WP_153189411.1 | hypothetical protein | - |
| EHC64_RS26015 () | 23039..23878 | + | 840 | WP_102591337.1 | hypothetical protein | - |
| EHC64_RS26020 () | 24790..25164 | + | 375 | WP_025788816.1 | hypothetical protein | - |
| EHC64_RS26025 () | 25253..25657 | - | 405 | Protein_29 | Recombination-promoting nuclease RpnA | VF |
| EHC64_RS26030 () | 25739..28765 | - | 3027 | WP_025789702.1 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| EHC64_RS26035 () | 28943..29590 | + | 648 | WP_023623169.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| EHC64_RS27435 () | 30647..30988 | + | 342 | WP_080277469.1 | hypothetical protein | - |
| EHC64_RS26045 () | 30972..31397 | + | 426 | WP_025789544.1 | hypothetical protein | - |
| EHC64_RS26050 () | 32084..32828 | - | 745 | Protein_34 | Recombination-promoting nuclease RpnA | VF |
| EHC64_RS26055 () | 32963..33043 | - | 81 | Protein_35 | recombinase family protein | - |
| EHC64_RS26060 () | 33763..34962 | + | 1200 | WP_071653156.1 | AAA family ATPase | - |
| EHC64_RS26065 () | 34962..36032 | + | 1071 | WP_086370862.1 | ParB/RepB/Spo0J family partition protein | - |
| EHC64_RS26070 () | 36026..36316 | - | 291 | Protein_38 | transposase | - |
| EHC64_RS26075 () | 36526..38445 | - | 1920 | WP_086370861.1 | metallophosphoesterase | - |
| EHC64_RS27440 () | 38889..39179 | - | 291 | Protein_40 | transposase | - |
| EHC64_RS26085 () | 40355..40855 | - | 501 | WP_157664729.1 | transglutaminase-like cysteine peptidase | - |
| EHC64_RS27445 () | 41163..41645 | + | 483 | Protein_42 | DDE-type integrase/transposase/recombinase | - |
| EHC64_RS26090 () | 42283..47169 | - | 4887 | WP_159404413.1 | Ig-like domain-containing protein | - |
| EHC64_RS26095 () | 47187..48284 | - | 1098 | WP_025792418.1 | Outer membrane protein A | VF |
| EHC64_RS26100 () | 48726..49817 | + | 1092 | Protein_45 | IS3 family transposase | - |
| EHC64_RS26105 () | 49814..49957 | + | 144 | WP_153189461.1 | hypothetical protein | - |
| EHC64_RS26110 () | 50102..50305 | + | 204 | Protein_47 | hypothetical protein | VF |
| EHC64_RS26115 () | 50780..51145 | - | 366 | WP_025789498.1 | hypothetical protein | - |
| EHC64_RS26120 () | 51211..51843 | - | 633 | WP_129194440.1 | hypothetical protein | - |
| EHC64_RS26125 () | 52102..54873 | - | 2772 | WP_159408186.1 | hypothetical protein | - |
| EHC64_RS26130 () | 54877..55797 | - | 921 | WP_025789495.1 | OmpA family protein | - |
| EHC64_RS26135 () | 55797..56852 | - | 1056 | WP_025499517.1 | hypothetical protein | - |
| EHC64_RS26140 () | 56852..57601 | - | 750 | WP_025789494.1 | hypothetical protein | - |
| EHC64_RS26145 () | 57607..60342 | - | 2736 | WP_025789493.1 | TcfC E-set like domain-containing protein | - |
| EHC64_RS26150 () | 60339..60896 | - | 558 | WP_025789492.1 | hypothetical protein | - |
| EHC64_RS26155 () | 60974..61612 | - | 639 | WP_025789491.1 | hypothetical protein | - |
| EHC64_RS26160 () | 61981..62619 | + | 639 | Protein_57 | IS5 family transposase ISVpa3 | Transposase |
| EHC64_RS26165 () | 62953..64041 | + | 1089 | WP_086370877.1 | replication initiation protein | - |
| EHC64_RS26175 () | 65284..66015 | + | 732 | WP_025789518.1 | AHH domain-containing protein | - |
| EHC64_RS26180 () | 66015..66590 | + | 576 | WP_017449240.1 | hypothetical protein | - |
| EHC64_RS26185 () | 66893..67234 | - | 342 | WP_023624650.1 | endoribonuclease MazF | Toxin Detail |
| EHC64_RS26190 () | 67231..67461 | - | 231 | WP_017449238.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| EHC64_RS26195 () | 67912..68637 | + | 726 | WP_017449237.1 | site-specific integrase | - |
| EHC64_RS26200 () | 68632..69015 | - | 384 | Protein_64 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| EHC64_RS26205 () | 69618..69839 | - | 222 | WP_023624649.1 | hypothetical protein | - |
| EHC64_RS26210 () | 70149..70523 | + | 375 | WP_127914005.1 | hypothetical protein | - |
| EHC64_RS26215 () | 71084..72115 | + | 1032 | WP_159408187.1 | Ig-like domain-containing protein | - |
| EHC64_RS26220 () | 72307..72951 | + | 645 | WP_140060721.1 | DUF1566 domain-containing protein | - |
| EHC64_RS26225 () | 73244..73678 | - | 435 | WP_023624645.1 | IS630 family transposase ISSod10 | Transposase |
| EHC64_RS26230 () | 74465..75397 | + | 933 | WP_023624644.1 | OmpA family protein | - |
| EHC64_RS26235 () | 75479..75727 | + | 249 | WP_025789522.1 | hypothetical protein | - |
| EHC64_RS26240 () | 75803..76102 | + | 300 | WP_023624643.1 | hypothetical protein | - |
| EHC64_RS26245 () | 76480..76656 | + | 177 | WP_153189439.1 | hypothetical protein | - |
| EHC64_RS26250 () | 76995..78134 | + | 1140 | WP_025789523.1 | Murein DD-endopeptidase MepM | VF |
| EHC64_RS26255 () | 78523..78735 | + | 213 | WP_127914006.1 | hypothetical protein | - |
| EHC64_RS26260 () | 78751..79068 | - | 318 | WP_023624638.1 | CcdB family protein | - |
| EHC64_RS26265 () | 79068..79313 | - | 246 | WP_017449246.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| EHC64_RS26270 () | 79414..79899 | - | 486 | WP_023624637.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| EHC64_RS26275 () | 79900..80169 | - | 270 | Protein_79 | IS6 family transposase ISSba18 | Transposase |
| EHC64_RS26280 () | 80549..81133 | + | 585 | Protein_80 | replication initiation protein | - |
| EHC64_RS26285 () | 81624..82043 | - | 420 | WP_129194448.1 | hypothetical protein | - |
| EHC64_RS26290 () | 82201..82374 | - | 174 | WP_017449264.1 | hypothetical protein | - |
| EHC64_RS26295 () | 82973..83474 | - | 502 | Protein_83 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| EHC64_RS26300 () | 83551..84534 | - | 984 | WP_017449262.1 | outer membrane beta-barrel protein | - |
| EHC64_RS26305 () | 84677..85198 | - | 522 | WP_025789149.1 | outer membrane beta-barrel protein | - |
| EHC64_RS26310 () | 85582..86619 | - | 1038 | Protein_86 | transposase | - |
| EHC64_RS26315 () | 86638..86942 | - | 305 | Protein_87 | hypothetical protein | - |
| EHC64_RS26320 () | 87947..88267 | - | 321 | WP_025792429.1 | hypothetical protein | - |
| EHC64_RS26325 () | 88303..88509 | - | 207 | WP_023623181.1 | hypothetical protein | - |
| EHC64_RS26330 () | 88518..88742 | - | 225 | WP_025789152.1 | hypothetical protein | - |
| EHC64_RS26335 () | 88801..89426 | - | 626 | Protein_91 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| EHC64_RS26340 () | 89808..91061 | - | 1254 | WP_025789153.1 | hypothetical protein | - |
| EHC64_RS26345 () | 91421..91564 | - | 144 | WP_023623177.1 | hypothetical protein | - |
| EHC64_RS26350 () | 91964..92350 | - | 387 | WP_025792428.1 | hypothetical protein | - |
| EHC64_RS26355 () | 92488..93090 | - | 603 | WP_023623175.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| EHC64_RS26360 () | 93404..93754 | + | 351 | WP_140060718.1 | hypothetical protein | - |
| EHC64_RS26365 () | 93893..94936 | - | 1044 | WP_140060719.1 | hypothetical protein | - |
| EHC64_RS26370 () | 94936..96198 | - | 1263 | WP_140065311.1 | hypothetical protein | - |
| EHC64_RS26375 () | 97063..97344 | + | 282 | WP_159408189.1 | hypothetical protein | - |
| EHC64_RS26380 () | 98009..98209 | - | 201 | WP_140060196.1 | hypothetical protein | - |
| EHC64_RS26385 () | 98226..98810 | - | 585 | WP_140060195.1 | DUF2913 family protein | - |
| EHC64_RS26390 () | 99404..99688 | + | 285 | WP_086370936.1 | hypothetical protein | - |
| EHC64_RS26395 () | 99771..100109 | + | 339 | WP_140060193.1 | type I restriction endonuclease subunit M | - |
| EHC64_RS26400 () | 100155..100439 | + | 285 | WP_140060192.1 | hypothetical protein | - |
| EHC64_RS26405 () | 100459..100614 | + | 156 | WP_153189414.1 | hypothetical protein | - |
| EHC64_RS26410 () | 100673..100870 | + | 198 | WP_025789633.1 | hypothetical protein | - |
| EHC64_RS26415 () | 100988..101935 | - | 948 | WP_025789632.1 | Type IV secretion system protein VirB11 | VF |
| EHC64_RS26420 () | 102057..102665 | - | 609 | WP_140060191.1 | hypothetical protein | - |
| EHC64_RS26425 () | 102662..103420 | - | 759 | WP_140060190.1 | AAA family ATPase | - |
| EHC64_RS26430 () | 103450..103833 | - | 384 | WP_140060189.1 | hypothetical protein | - |
| EHC64_RS26435 () | 104109..104426 | + | 318 | WP_140060188.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|