MGE detailed information
MGE type: Prophage MGE length: 47199 bp
Accession: NZ_CP034212 Location: 520091..567289 Organism: Escherichia albertii strain 2010C-3449 Replicon: chromosome
Accession: NZ_CP034212 Location: 520091..567289 Organism: Escherichia albertii strain 2010C-3449 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCF17_RS02635 () | 515958..516758 | + | 801 | WP_151401029.1 | PTS mannose transporter subunit IIC | - |
| CCF17_RS02640 () | 516771..517622 | + | 852 | WP_001331209.1 | PTS mannose transporter subunit IID | - |
| CCF17_RS02645 () | 517677..518135 | + | 459 | WP_000156308.1 | DUF986 family protein | - |
| CCF17_RS02650 () | 518552..519118 | + | 567 | WP_151401030.1 | manganese efflux pump MntP | - |
| CCF17_RS02655 () | 519115..519924 | - | 810 | WP_149541608.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| CCF17_RS02660 () | 520091..520300 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| CCF17_RS02665 () | 520313..520456 | - | 144 | WP_002462303.1 | DUF2627 domain-containing protein | - |
| CCF17_RS02670 () | 521089..521376 | - | 288 | WP_001006859.1 | YebO family protein | - |
| CCF17_RS02675 () | 521451..521594 | - | 144 | WP_000714546.1 | PhoP/PhoQ regulator MgrB | - |
| CCF17_RS02680 () | 521753..521992 | + | 240 | WP_001211014.1 | YobH family protein | - |
| CCF17_RS02685 () | 522150..522941 | - | 792 | WP_125059255.1 | DNA-binding transcriptional regulator KdgR | - |
| CCF17_RS02690 () | 523119..524492 | + | 1374 | WP_059220018.1 | MFS transporter | - |
| CCF17_RS02695 () | 524537..525418 | - | 882 | WP_000984517.1 | protease HtpX | - |
| CCF17_RS02710 () | 525683..526141 | - | 459 | WP_143354370.1 | IS200-IS605 family transposase IS200C | Transposase |
| CCF17_RS02720 () | 526321..528369 | - | 2049 | WP_001055803.1 | carboxy terminal-processing peptidase | - |
| CCF17_RS02725 () | 528389..529087 | - | 699 | WP_000431383.1 | RNA chaperone ProQ | - |
| CCF17_RS02730 () | 529184..529681 | - | 498 | WP_151401031.1 | L-methionine (R)-S-oxide reductase | - |
| CCF17_RS02735 () | 529811..531094 | + | 1284 | WP_151401032.1 | membrane integrity lipid transport subunit YebS | - |
| CCF17_RS02740 () | 531063..533696 | + | 2634 | Protein_532 | lipid-binding membrane homeostasis protein YebT | - |
| CCF17_RS02745 () | 533776..535215 | + | 1440 | WP_059218705.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CCF17_RS02750 () | 535333..535569 | + | 237 | WP_059223937.1 | DUF1480 family protein | - |
| CCF17_RS02755 () | 535682..536140 | - | 459 | WP_143354370.1 | IS200-IS605 family transposase IS200C | Transposase |
| CCF17_RS02765 () | 536386..536577 | + | 192 | WP_025238870.1 | YebW family protein | - |
| CCF17_RS02770 () | 536578..537234 | - | 657 | WP_025238869.1 | protein-serine/threonine phosphatase | - |
| CCF17_RS02775 () | 537328..537762 | - | 435 | WP_151401033.1 | Effector protein NleF | VF |
| CCF17_RS02780 () | 537967..538623 | + | 657 | WP_151401034.1 | hypothetical protein | VF |
| CCF17_RS02785 () | 538883..539617 | + | 735 | WP_000962058.1 | hypothetical protein | - |
| CCF17_RS25390 () | 539945..540934 | + | 990 | WP_231932499.1 | hypothetical protein | - |
| CCF17_RS25395 () | 540936..541727 | + | 792 | WP_241201750.1 | hypothetical protein | - |
| CCF17_RS02795 () | 542047..543081 | - | 1035 | Protein_543 | Trk system potassium transporter TrkG | - |
| CCF17_RS02805 () | 543751..544239 | - | 489 | Protein_545 | potassium transporter TrkG | - |
| - | 546371..546603 | + | 233 | - | - | Antitoxin Detail |
| - | 546373..546475 | - | 103 | - | - | Toxin Detail |
| CCF17_RS02820 () | 546633..546974 | - | 342 | WP_000976487.1 | DUF2511 domain-containing protein | - |
| CCF17_RS02825 () | 546987..547859 | - | 873 | WP_151401035.1 | copper homeostasis membrane protein CopD | - |
| CCF17_RS02830 () | 547863..548240 | - | 378 | WP_151401036.1 | CopC domain-containing protein YobA | - |
| CCF17_RS02835 () | 548379..548609 | + | 231 | WP_000916758.1 | DNA polymerase III subunit theta | - |
| CCF17_RS02840 () | 548775..548987 | + | 213 | Protein_550 | carbon-nitrogen hydrolase family protein YobB | - |
| CCF17_RS02845 () | 549011..549673 | + | 663 | WP_000944295.1 | exodeoxyribonuclease X | - |
| CCF17_RS02850 () | 549670..551727 | - | 2058 | WP_151401037.1 | oligopeptidase B | - |
| CCF17_RS25400 () | 551879..552025 | - | 147 | WP_164997317.1 | hypothetical protein | - |
| CCF17_RS02855 () | 552041..552397 | - | 357 | WP_151401038.1 | protein YebF | - |
| CCF17_RS02860 () | 552464..552754 | - | 291 | WP_000257735.1 | DNA damage-inducible protein YebG | - |
| CCF17_RS02865 () | 552888..554066 | + | 1179 | WP_151401039.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CCF17_RS02870 () | 554121..554762 | - | 642 | WP_021500531.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CCF17_RS02875 () | 554801..556612 | - | 1812 | WP_151401040.1 | phosphogluconate dehydratase | - |
| CCF17_RS02880 () | 556847..558322 | - | 1476 | WP_000301734.1 | glucose-6-phosphate dehydrogenase | - |
| CCF17_RS25405 () | 558429..558647 | - | 219 | WP_000973505.1 | hypothetical protein | - |
| CCF17_RS02885 () | 558670..559539 | + | 870 | WP_151401041.1 | DNA-binding transcriptional regulator HexR | - |
| CCF17_RS02890 () | 559666..561108 | + | 1443 | WP_151401042.1 | pyruvate kinase | - |
| CCF17_RS02895 () | 561251..562225 | - | 975 | WP_002462315.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CCF17_RS02900 () | 562343..563665 | - | 1323 | WP_001184056.1 | murein DD-endopeptidase MepM | - |
| CCF17_RS02905 () | 563681..564613 | - | 933 | WP_024165001.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CCF17_RS02910 () | 564692..565447 | + | 756 | WP_000203005.1 | Zinc import ATP-binding protein ZnuC | VF |
| CCF17_RS02915 () | 565444..566229 | + | 786 | WP_000571487.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| CCF17_RS02920 () | 566279..567289 | - | 1011 | WP_000568517.1 | Holliday junction branch migration DNA helicase RuvB | - |
| CCF17_RS02925 () | 567298..567909 | - | 612 | WP_000580343.1 | Holliday junction branch migration protein RuvA | - |
| CCF17_RS02930 () | 568005..568697 | - | 693 | WP_241201751.1 | hypothetical protein | - |
| CCF17_RS02935 () | 569000..569602 | + | 603 | WP_001024933.1 | YebB family permuted papain-like enzyme | - |
| CCF17_RS02940 () | 569604..570125 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CCF17_RS02945 () | 570160..570900 | - | 741 | WP_000907237.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CCF17_RS02950 () | 570930..571382 | - | 453 | WP_010338146.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|