MGE detailed information
MGE type: Prophage MGE length: 66001 bp
Accession: NZ_CP034212 Location: 4494379..4560379 Organism: Escherichia albertii strain 2010C-3449 Replicon: chromosome
Accession: NZ_CP034212 Location: 4494379..4560379 Organism: Escherichia albertii strain 2010C-3449 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCF17_RS22960 (4489865) | 4489865..4490800 | + | 936 | WP_151402209.1 | L,D-transpeptidase | - |
| CCF17_RS22970 (4491124) | 4491124..4492578 | + | 1455 | WP_277424936.1 | EmmdR/YeeO family multidrug/toxin efflux MATE transporter | - |
| CCF17_RS22980 (4492823) | 4492823..4494277 | - | 1455 | WP_151402211.1 | AMP nucleosidase | - |
| CCF17_RS22985 (4494379) | 4494379..4495692 | - | 1314 | WP_151402212.1 | shikimate transporter | - |
| CCF17_RS25835 (4495826) | 4495826..4495975 | + | 150 | WP_164997311.1 | hypothetical protein | - |
| CCF17_RS25840 (4496763) | 4496763..4500941 | - | 4179 | Protein_4400 | RHS element core protein | - |
| CCF17_RS23010 (4501261) | 4501261..4501431 | - | 171 | Protein_4401 | Arm DNA-binding domain-containing protein | - |
| CCF17_RS23020 (4501993) | 4501993..4502427 | + | 435 | Protein_4402 | LysR family transcriptional regulator | - |
| CCF17_RS23025 (4502545) | 4502545..4503078 | + | 534 | Protein_4403 | LysR substrate-binding domain-containing protein | - |
| CCF17_RS23030 (4503143) | 4503143..4503840 | + | 698 | WP_225520032.1 | IS1 family transposase IS1G | Transposase |
| CCF17_RS23035 (4503865) | 4503865..4504070 | + | 206 | Protein_4405 | helix-turn-helix transcriptional regulator | - |
| CCF17_RS23045 (4504418) | 4504418..4504675 | + | 258 | WP_059225519.1 | hypothetical protein | Antitoxin Detail |
| CCF17_RS23050 (4504676) | 4504676..4505008 | + | 333 | WP_059225520.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| CCF17_RS25845 (4505120) | 4505120..4505497 | + | 378 | WP_241201721.1 | hypothetical protein | - |
| CCF17_RS23070 (4505815) | 4505815..4506699 | + | 885 | WP_151402214.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CCF17_RS23075 (4506795) | 4506795..4507082 | - | 288 | WP_151402215.1 | hypothetical protein | - |
| CCF17_RS23080 (4507807) | 4507807..4509069 | - | 1263 | WP_151402216.1 | Prophage integrase IntS ; Integrase | Integrase |
| CCF17_RS23090 (4509407) | 4509407..4510204 | - | 798 | WP_024164886.1 | DgsA anti-repressor MtfA | - |
| CCF17_RS23100 (4510415) | 4510415..4511455 | - | 1041 | WP_151402217.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CCF17_RS23105 (4511455) | 4511455..4511658 | - | 204 | WP_000096345.1 | DUF4224 domain-containing protein | - |
| CCF17_RS23110 (4511717) | 4511717..4514188 | - | 2472 | WP_151402218.1 | exonuclease | - |
| CCF17_RS23115 (4514281) | 4514281..4514472 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| CCF17_RS23120 (4514469) | 4514469..4514657 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| CCF17_RS23130 (4515223) | 4515223..4515441 | - | 219 | WP_001171942.1 | protein YdfC | - |
| CCF17_RS26055 (4515471) | 4515471..4515599 | - | 129 | WP_000344929.1 | hypothetical protein | - |
| CCF17_RS23135 (4515601) | 4515601..4515756 | - | 156 | WP_000379557.1 | DUF1391 family protein | - |
| CCF17_RS23140 (4515949) | 4515949..4516356 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| CCF17_RS23145 (4516434) | 4516434..4516661 | + | 228 | WP_000476994.1 | Cro/CI family transcriptional regulator | - |
| CCF17_RS23150 (4516645) | 4516645..4517166 | + | 522 | WP_000705361.1 | toxin YdaT family protein | - |
| CCF17_RS23155 (4517147) | 4517147..4518112 | + | 966 | WP_001533283.1 | hypothetical protein | - |
| CCF17_RS23160 (4518153) | 4518153..4518560 | + | 408 | WP_001151172.1 | DUF977 family protein | - |
| CCF17_RS23165 (4518928) | 4518928..4519602 | + | 675 | WP_241201722.1 | hypothetical protein | - |
| CCF17_RS23170 (4519653) | 4519653..4520350 | + | 698 | WP_225520032.1 | IS1-like element IS1A family transposase | - |
| CCF17_RS23175 (4520352) | 4520352..4520735 | + | 384 | WP_241201723.1 | hypothetical protein | - |
| CCF17_RS23185 (4521107) | 4521107..4521262 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CCF17_RS23190 (4521428) | 4521428..4522078 | + | 651 | WP_001004956.1 | hypothetical protein | - |
| CCF17_RS23195 (4522059) | 4522059..4523162 | + | 1104 | WP_151402219.1 | XRE family transcriptional regulator | - |
| CCF17_RS23200 (4523317) | 4523317..4523580 | + | 264 | WP_077787078.1 | hypothetical protein | - |
| CCF17_RS23205 (4523647) | 4523647..4523925 | + | 279 | WP_044861117.1 | hypothetical protein | - |
| CCF17_RS23210 (4523927) | 4523927..4524976 | + | 1050 | WP_151402220.1 | DUF968 domain-containing protein | - |
| CCF17_RS23215 (4524989) | 4524989..4525363 | + | 375 | WP_151402221.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CCF17_RS23220 (4525360) | 4525360..4526181 | + | 822 | WP_151402222.1 | antitermination protein | - |
| CCF17_RS23225 (4526408) | 4526408..4526605 | + | 198 | WP_000917761.1 | hypothetical protein | - |
| CCF17_RS23230 (4526756) | 4526756..4527805 | + | 1050 | Protein_4438 | site-specific DNA-methyltransferase | - |
| CCF17_RS25850 (4528209) | 4528209..4528325 | - | 117 | Protein_4439 | hypothetical protein | - |
| CCF17_RS23250 (4528396) | 4528396..4528731 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| CCF17_RS23255 (4528992) | 4528992..4530845 | + | 1854 | WP_151402223.1 | DUF1737 domain-containing protein | - |
| CCF17_RS23260 (4530996) | 4530996..4531211 | + | 216 | WP_000284510.1 | class II holin family protein | - |
| CCF17_RS23265 (4531215) | 4531215..4531772 | + | 558 | WP_001015163.1 | hypothetical protein | - |
| CCF17_RS23270 (4531809) | 4531809..4532342 | + | 534 | WP_001092893.1 | lysozyme | - |
| CCF17_RS25855 (4532502) | 4532502..4532639 | + | 138 | WP_000459345.1 | hypothetical protein | - |
| CCF17_RS25860 (4532641) | 4532641..4533105 | + | 465 | WP_241201724.1 | lysis protein | - |
| CCF17_RS23280 (4533413) | 4533413..4533823 | - | 411 | WP_000079508.1 | DUF1398 family protein | - |
| CCF17_RS23285 (4533881) | 4533881..4534114 | - | 234 | WP_032189194.1 | YlcI/YnfO family protein | - |
| CCF17_RS23290 (4534510) | 4534510..4535019 | + | 510 | WP_000235436.1 | terminase small subunit | - |
| CCF17_RS23295 (4534991) | 4534991..4536919 | + | 1929 | WP_001426431.1 | phage terminase large subunit family protein | - |
| CCF17_RS23300 (4536903) | 4536903..4537109 | + | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| CCF17_RS23305 (4537106) | 4537106..4538698 | + | 1593 | WP_151402225.1 | phage portal protein | - |
| CCF17_RS23310 (4538688) | 4538688..4540193 | + | 1506 | WP_151402226.1 | S49 family peptidase | - |
| CCF17_RS23315 (4540230) | 4540230..4540577 | + | 348 | WP_000256809.1 | head decoration protein | - |
| CCF17_RS23325 (4540756) | 4540756..4541214 | + | 459 | WP_151402227.1 | IS200-IS605 family transposase IS200C | Transposase |
| CCF17_RS23335 (4541467) | 4541467..4541721 | + | 255 | Protein_4456 | IS200-IS605 family transposase IS200C | Transposase |
| CCF17_RS23345 (4542490) | 4542490..4542701 | + | 212 | Protein_4458 | IS200/IS605-like element IS200F family transposase | - |
| CCF17_RS23350 (4542833) | 4542833..4543861 | + | 1029 | WP_000522615.1 | major capsid protein | - |
| CCF17_RS23355 (4543913) | 4543913..4544287 | + | 375 | WP_125059893.1 | DNA-packaging protein FI | - |
| CCF17_RS23360 (4544280) | 4544280..4544633 | + | 354 | WP_001204562.1 | head-tail joining protein | - |
| CCF17_RS23365 (4544649) | 4544649..4545182 | + | 534 | WP_000975046.1 | phage tail protein | - |
| CCF17_RS23370 (4545179) | 4545179..4545574 | + | 396 | WP_000683066.1 | phage minor tail U family protein | - |
| CCF17_RS23375 (4545582) | 4545582..4546333 | + | 752 | Protein_4464 | phage tail protein | - |
| CCF17_RS23380 (4546347) | 4546347..4546778 | + | 432 | WP_151401087.1 | phage minor tail protein G | - |
| CCF17_RS23385 (4546805) | 4546805..4547218 | + | 414 | WP_000533425.1 | phage tail assembly protein T | - |
| CCF17_RS23390 (4547199) | 4547199..4549777 | + | 2579 | Protein_4467 | phage tail tape measure protein | - |
| CCF17_RS23395 (4549774) | 4549774..4550103 | + | 330 | WP_151401085.1 | phage tail protein | - |
| CCF17_RS23400 (4550103) | 4550103..4550801 | + | 699 | WP_151401084.1 | phage minor tail protein L | - |
| CCF17_RS23405 (4550812) | 4550812..4551555 | + | 744 | WP_151401083.1 | C40 family peptidase | - |
| CCF17_RS23410 (4551552) | 4551552..4552133 | + | 582 | WP_241201725.1 | tail assembly protein | - |
| CCF17_RS23415 (4552369) | 4552369..4555848 | + | 3480 | WP_151402228.1 | host specificity protein J | - |
| CCF17_RS23420 (4555916) | 4555916..4556515 | + | 600 | WP_151402229.1 | Outer membrane protein X | VF |
| CCF17_RS23425 (4556580) | 4556580..4557893 | + | 1314 | WP_151402230.1 | ISNCY family transposase KIS | Transposase |
| CCF17_RS25865 (4557856) | 4557856..4557990 | + | 135 | Protein_4475 | phage tail protein | - |
| CCF17_RS23430 (4558077) | 4558077..4558823 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| CCF17_RS23435 (4558838) | 4558838..4560379 | - | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| CCF17_RS23440 (4560547) | 4560547..4560750 | + | 204 | WP_241201726.1 | phage tail fiber C-terminal domain-containing protein | - |
| CCF17_RS23445 (4560868) | 4560868..4561143 | - | 276 | WP_001443842.1 | hypothetical protein | - |
| CCF17_RS23450 (4561206) | 4561206..4562567 | - | 1362 | WP_000938124.1 | type III secretion system effector EspK | - |
| CCF17_RS23455 (4562956) | 4562956..4563096 | + | 141 | Protein_4481 | tail fiber assembly protein | - |
| CCF17_RS23470 (4563707) | 4563707..4564825 | + | 1119 | WP_059219811.1 | hydrogenase 1 small subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|