MGE detailed information
MGE type: Genomic_island MGE length: 15859 bp
Accession: NZ_CP034106 Location: 4467065..4482923 Organism: Escherichia coli strain RCAD0514 Replicon: chromosome
Accession: NZ_CP034106 Location: 4467065..4482923 Organism: Escherichia coli strain RCAD0514 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGA47_RS21525 () | 4464670..4465395 | - | 726 | WP_072646071.1 | type 1 fimbria chaperone FimC | - |
| EGA47_RS21530 () | 4465432..4465971 | - | 540 | WP_124846258.1 | type 1 fimbrial protein | - |
| EGA47_RS21535 () | 4466036..4466584 | - | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| EGA47_RS21540 () | 4467065..4467661 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| EGA47_RS21545 () | 4468139..4468741 | - | 603 | WP_032161359.1 | Tyrosine recombinase XerC | VF |
| EGA47_RS21550 () | 4470197..4470913 | + | 717 | WP_001443018.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| EGA47_RS21555 () | 4470933..4472039 | + | 1107 | WP_001355522.1 | N-acetylneuraminate epimerase | - |
| EGA47_RS21560 () | 4472104..4473084 | + | 981 | WP_000338801.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| EGA47_RS21565 () | 4473092..4473742 | - | 651 | WP_001037977.1 | HNH endonuclease | - |
| EGA47_RS21570 () | 4473879..4474022 | + | 144 | Protein_4203 | HNH endonuclease | - |
| EGA47_RS21575 () | 4474656..4475444 | - | 789 | WP_032161357.1 | helix-turn-helix domain-containing protein | - |
| EGA47_RS21580 () | 4475561..4475836 | - | 276 | WP_001683517.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| EGA47_RS21585 () | 4475840..4476088 | - | 249 | WP_024187601.1 | ribbon-helix-helix domain-containing protein | - |
| EGA47_RS21590 () | 4476165..4476998 | - | 834 | WP_032250394.1 | DUF4942 domain-containing protein | - |
| EGA47_RS21595 () | 4477113..4477454 | - | 342 | WP_032161355.1 | TA system toxin CbtA family protein | Toxin Detail |
| EGA47_RS21600 () | 4477485..4477820 | - | 336 | WP_032161354.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EGA47_RS21605 () | 4477820..4478293 | - | 474 | WP_032161353.1 | DNA repair protein RadC | - |
| EGA47_RS21610 () | 4478323..4479141 | - | 819 | WP_001683514.1 | DUF945 domain-containing protein | - |
| EGA47_RS21615 () | 4479377..4479841 | - | 465 | Protein_4212 | hypothetical protein | - |
| EGA47_RS21620 () | 4479858..4480555 | - | 698 | Protein_4213 | IS1 family transposase IS1R | Transposase |
| EGA47_RS21625 () | 4480649..4481101 | + | 453 | WP_152925145.1 | hypothetical protein | - |
| EGA47_RS21630 () | 4481325..4482305 | - | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| EGA47_RS21635 () | 4482993..4483871 | - | 879 | WP_032161343.1 | HNH endonuclease | - |
| EGA47_RS21640 () | 4484076..4485341 | - | 1266 | WP_032161342.1 | integrase arm-type DNA-binding domain-containing protein | - |
| EGA47_RS21650 () | 4485808..4486827 | + | 1020 | WP_001300770.1 | NADPH-dependent aldehyde reductase Ahr | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|