MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 66641 bp
Accession: NZ_CP033716 Location: 1..66641 Organism: Yersinia pseudotuberculosis strain FDAARGOS_579 Replicon: plasmid unnamed
Accession: NZ_CP033716 Location: 1..66641 Organism: Yersinia pseudotuberculosis strain FDAARGOS_579 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX53_RS00010 () | 90..1295 | + | 1206 | WP_011191382.1 | Protein YopB | VF |
| EGX53_RS00015 () | 1314..2234 | + | 921 | WP_123767102.1 | Protein YopD | VF |
| EGX53_RS00020 () | 2702..3339 | - | 638 | Protein_3 | IS6 family transposase | - |
| EGX53_RS00025 () | 3360..3575 | + | 216 | WP_011191379.1 | hypothetical protein | - |
| EGX53_RS00030 () | 3899..5191 | + | 1293 | WP_164491552.1 | Outer membrane protein YopM | VF |
| EGX53_RS00035 () | 5234..5551 | - | 318 | Protein_6 | IS256 family transposase ISSod4 | Transposase |
| EGX53_RS00040 () | 5433..5678 | - | 246 | WP_116442925.1 | transposase | - |
| EGX53_RS00045 () | 5681..5899 | + | 219 | Protein_8 | IS6 family transposase | - |
| EGX53_RS00050 () | 6427..6846 | - | 420 | WP_123767104.1 | hypothetical protein | - |
| EGX53_RS00055 () | 6862..6999 | - | 138 | Protein_10 | IS6 family transposase | - |
| EGX53_RS00060 () | 6992..7117 | - | 126 | Protein_11 | Cysteine protease YopT | VF |
| EGX53_RS00065 () | 7637..8185 | + | 549 | WP_011191373.1 | hypothetical protein | VF |
| EGX53_RS00070 () | 8344..8672 | + | 329 | Protein_13 | hypothetical protein | - |
| EGX53_RS00080 () | 8818..9447 | + | 630 | WP_071880093.1 | conjugal transfer protein TraT | - |
| EGX53_RS00085 () | 9554..10700 | + | 1147 | Protein_15 | IS3 family transposase | - |
| EGX53_RS00095 () | 11459..12625 | + | 1167 | WP_002220902.1 | Sporulation initiation inhibitor protein Soj | VF |
| EGX53_RS00100 () | 12622..13587 | + | 966 | WP_002213354.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| EGX53_RS22045 () | 13747..14028 | + | 282 | WP_164491551.1 | hypothetical protein | - |
| EGX53_RS22050 () | 14177..14350 | - | 174 | WP_002213357.1 | hypothetical protein | - |
| EGX53_RS00110 () | 14435..14727 | + | 293 | Protein_20 | IS6 family transposase ISEas1 | Transposase |
| EGX53_RS00115 () | 14893..15135 | + | 243 | WP_002224342.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| EGX53_RS00120 () | 15128..15427 | + | 300 | WP_002213360.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EGX53_RS00125 () | 15567..16226 | - | 660 | WP_123767105.1 | Outer membrane virulence protein YopE | VF |
| EGX53_RS00130 () | 16420..16812 | + | 393 | WP_002213403.1 | YopE regulator | VF |
| EGX53_RS00135 () | 16875..17519 | - | 645 | Protein_25 | IS3 family transposase ISYen3 | Transposase |
| EGX53_RS00140 () | 17622..18794 | + | 1173 | WP_011191364.1 | IS21 family transposase IS21 | Transposase |
| EGX53_RS00145 () | 18794..19192 | + | 399 | Protein_27 | IS21 family transposase IS21 | Transposase |
| EGX53_RS00150 () | 19570..19995 | + | 426 | WP_002213267.1 | hypothetical protein | VF |
| EGX53_RS00160 () | 20143..21243 | - | 1101 | Protein_29 | IS3 family transposase | - |
| EGX53_RS00165 () | 21343..21672 | - | 330 | WP_123767106.1 | hypothetical protein | - |
| EGX53_RS00170 () | 21811..22275 | - | 465 | WP_123767107.1 | hypothetical protein | - |
| EGX53_RS00175 () | 22294..22845 | - | 552 | WP_002213258.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| EGX53_RS00180 () | 23009..25324 | + | 2316 | WP_123767108.1 | Tn3 family transposase ISEc63 | Transposase |
| EGX53_RS00185 () | 25357..25707 | - | 351 | Protein_34 | IS3 family transposase IS1351 | Transposase |
| EGX53_RS00190 () | 26310..27614 | + | 1305 | WP_032488480.1 | Adhesin YadA | VF |
| EGX53_RS22055 () | 27684..27842 | + | 159 | Protein_36 | EamA family transporter | - |
| EGX53_RS00200 () | 27943..28212 | - | 270 | WP_057532654.1 | transposase | - |
| EGX53_RS00205 () | 28281..28739 | + | 459 | WP_002213246.1 | hypothetical protein | - |
| EGX53_RS00215 () | 28969..29229 | + | 261 | WP_072080544.1 | IS3 family transposase ISKpn37 | Transposase |
| EGX53_RS00220 () | 29256..29663 | + | 408 | WP_042659897.1 | IS3 family transposase ISKpn37 | Transposase |
| EGX53_RS00225 () | 29646..29882 | - | 237 | Protein_41 | DDE-type integrase/transposase/recombinase | - |
| EGX53_RS00230 () | 30080..30328 | + | 249 | WP_032466929.1 | phospholipase | - |
| EGX53_RS00235 () | 30466..30720 | + | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| EGX53_RS00240 () | 30962..31036 | + | 75 | WP_002233140.1 | RepA leader peptide Tap | - |
| EGX53_RS00245 () | 31017..31895 | + | 879 | WP_002213292.1 | incFII family plasmid replication initiator RepA | - |
| EGX53_RS00255 () | 33068..33307 | + | 240 | WP_002213291.1 | hypothetical protein | - |
| EGX53_RS00265 () | 33485..33797 | + | 313 | Protein_47 | IS3 family transposase ISKpn37 | Transposase |
| EGX53_RS00270 () | 34053..34502 | + | 450 | WP_002229809.1 | hypothetical protein | VF |
| EGX53_RS00275 () | 34510..36708 | + | 2199 | WP_011191359.1 | Protein kinase YpkA | VF |
| EGX53_RS00280 () | 37104..37970 | + | 867 | WP_002225474.1 | Effector protein YopJ | VF |
| EGX53_RS00285 () | 38556..39134 | - | 579 | Protein_51 | IS3 family transposase ISYpe1 | Transposase |
| EGX53_RS00290 () | 39137..39370 | + | 234 | Protein_52 | transposase domain-containing protein | - |
| EGX53_RS00295 () | 39653..41059 | + | 1407 | WP_002213278.1 | Tyrosine-protein phosphatase YopH | VF |
| EGX53_RS00300 () | 41280..41552 | - | 273 | Protein_54 | transposase | - |
| EGX53_RS00305 () | 41571..42588 | - | 1018 | Protein_55 | IS3 family transposase | - |
| EGX53_RS00315 () | 43136..43483 | - | 348 | WP_002212907.1 | Yop proteins translocation protein M | VF |
| EGX53_RS00320 () | 43708..44373 | - | 666 | WP_010981371.1 | Yop proteins translocation protein L | VF |
| EGX53_RS00325 () | 44319..44948 | - | 630 | WP_002361471.1 | Yop proteins translocation protein K | VF |
| EGX53_RS00330 () | 44948..45682 | - | 735 | WP_002212912.1 | Yop proteins translocation lipoprotein J | VF |
| EGX53_RS00335 () | 45689..46036 | - | 348 | WP_002212914.1 | Yop proteins translocation protein I | VF |
| EGX53_RS00340 () | 46037..46534 | - | 498 | WP_002212915.1 | Yop proteins translocation protein H | VF |
| EGX53_RS00345 () | 46531..46878 | - | 348 | WP_011191389.1 | Putative Yop proteins translocation protein G | VF |
| EGX53_RS00350 () | 46880..47143 | - | 264 | WP_002212916.1 | Yop proteins translocation protein F | VF |
| EGX53_RS00355 () | 47144..47344 | - | 201 | WP_002212917.1 | Putative Yop proteins translocation protein E | VF |
| EGX53_RS00360 () | 47341..48600 | - | 1260 | WP_002212919.1 | Yop proteins translocation protein D | VF |
| EGX53_RS00365 () | 48597..50420 | - | 1824 | WP_042592532.1 | Yop proteins translocation protein C | VF |
| EGX53_RS00370 () | 50426..50839 | - | 414 | WP_002212925.1 | Chaperone protein YscB | VF |
| EGX53_RS00375 () | 51065..51163 | - | 99 | WP_002229797.1 | type III secretion system protein YscA | - |
| EGX53_RS00380 () | 51242..52057 | - | 816 | WP_002212931.1 | Virulence regulon transcriptional activator VirF | VF |
| EGX53_RS00385 () | 52181..52576 | - | 396 | WP_002222527.1 | Exoenzyme S synthesis protein B | VF |
| EGX53_RS00390 () | 53152..54216 | - | 1065 | WP_002212936.1 | Yop proteins translocation protein U | VF |
| EGX53_RS00395 () | 54216..55001 | - | 786 | WP_002212938.1 | Surface presentation of antigens protein SpaR | VF |
| EGX53_RS00400 () | 54998..55264 | - | 267 | WP_002212945.1 | hypothetical protein | VF |
| EGX53_RS00405 () | 55266..55919 | - | 654 | WP_002212947.1 | Surface presentation of antigens protein SpaP | VF |
| EGX53_RS00410 () | 55916..56839 | - | 924 | WP_050309924.1 | Yop proteins translocation protein Q | VF |
| EGX53_RS00415 () | 56836..58203 | - | 1368 | WP_002212950.1 | hypothetical protein | VF |
| EGX53_RS00420 () | 58203..58667 | - | 465 | WP_002212952.1 | Yop proteins translocation protein O | VF |
| EGX53_RS00425 () | 58664..59983 | - | 1320 | WP_002212955.1 | putative ATP synthase YscN | VF |
| EGX53_RS00430 () | 60181..61062 | + | 882 | WP_002212958.1 | Outer membrane protein YopN | VF |
| EGX53_RS00435 () | 61043..61321 | + | 279 | WP_002212965.1 | Protein TyeA | VF |
| EGX53_RS00440 () | 61308..61679 | + | 372 | WP_002229794.1 | Chaperone protein SycN | VF |
| EGX53_RS00445 () | 61676..62044 | + | 369 | WP_002212969.1 | Yop proteins translocation protein X | VF |
| EGX53_RS00450 () | 62041..62385 | + | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| EGX53_RS00455 () | 62372..64486 | + | 2115 | WP_002212971.1 | Invasion protein InvA | VF |
| EGX53_RS00460 () | 64483..64923 | + | 441 | WP_002220918.1 | hypothetical protein | VF |
| EGX53_RS00465 () | 64965..65252 | + | 288 | WP_002212973.1 | hypothetical protein | VF |
| EGX53_RS00470 () | 65254..66234 | + | 981 | WP_011191383.1 | Virulence-associated V antigen | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|