MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 146417 bp
Accession: NZ_CP033515 Location: 2345878..2492294 Organism: Vibrio cholerae strain E4 Replicon: chromosome
Accession: NZ_CP033515 Location: 2345878..2492294 Organism: Vibrio cholerae strain E4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EEL44_RS17390 () | 2341645..2342169 | + | 525 | WP_001226222.1 | inosine/xanthosine triphosphatase | - |
| EEL44_RS17395 () | 2342247..2342558 | - | 312 | WP_000250616.1 | trp operon repressor | - |
| EEL44_RS17400 () | 2342613..2344559 | - | 1947 | WP_000197615.1 | murein transglycosylase | - |
| EEL44_RS17405 () | 2344921..2346588 | + | 1668 | WP_000852865.1 | energy-dependent translational throttle protein EttA | - |
| EEL44_RS17410 () | 2346759..2347130 | + | 372 | WP_000570783.1 | PilZ domain-containing protein | - |
| EEL44_RS17415 () | 2347197..2348324 | - | 1128 | WP_000257629.1 | T-protein | VF |
| EEL44_RS17420 () | 2348337..2349410 | - | 1074 | WP_000747937.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| EEL44_RS17425 () | 2349652..2351328 | + | 1677 | WP_000364257.1 | Sensor histidine kinase BtsS | VF |
| EEL44_RS17430 () | 2351338..2352051 | + | 714 | WP_000947378.1 | Transcriptional regulatory protein BtsR | VF |
| EEL44_RS17435 () | 2352078..2353070 | - | 993 | WP_000529115.1 | beta-N-acetylhexosaminidase | - |
| EEL44_RS17440 () | 2353176..2354288 | + | 1113 | WP_000840717.1 | anhydro-N-acetylmuramic acid kinase | - |
| EEL44_RS17445 () | 2354306..2355229 | + | 924 | WP_000180252.1 | N-acetylmuramic acid 6-phosphate etherase | - |
| EEL44_RS17450 () | 2355253..2357049 | - | 1797 | WP_000544193.1 | sodium:proton antiporter | - |
| EEL44_RS17455 () | 2357068..2357409 | - | 342 | WP_001883835.1 | DUF2799 domain-containing protein | - |
| EEL44_RS17460 () | 2357662..2359146 | + | 1485 | WP_000964317.1 | carbon starvation protein A | - |
| EEL44_RS17465 () | 2359283..2360245 | - | 963 | WP_001883831.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| EEL44_RS17470 () | 2360280..2360714 | - | 435 | WP_001068088.1 | FKBP-type peptidyl-prolyl cis-trans isomerase | - |
| EEL44_RS17475 () | 2360877..2361392 | - | 516 | WP_000071968.1 | Lipoprotein signal peptidase | VF |
| EEL44_RS17480 () | 2361408..2364257 | - | 2850 | WP_000006088.1 | isoleucine--tRNA ligase | - |
| EEL44_RS17485 () | 2364288..2365256 | - | 969 | WP_000420406.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| EEL44_RS17490 () | 2365325..2366887 | - | 1563 | WP_001911253.1 | murein biosynthesis integral membrane protein MurJ | - |
| EEL44_RS17495 () | 2367145..2367405 | + | 261 | WP_000002742.1 | 30S ribosomal protein S20 | - |
| EEL44_RS17500 () | 2367474..2367776 | - | 303 | WP_001053149.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| EEL44_RS17505 () | 2367999..2368889 | - | 891 | WP_000018876.1 | Transcriptional activator protein NhaR | VF |
| EEL44_RS17510 () | 2369284..2370432 | + | 1149 | WP_000609761.1 | Na/Pi cotransporter family protein | - |
| EEL44_RS17515 () | 2370525..2371376 | - | 852 | WP_001250353.1 | thymidylate synthase | - |
| EEL44_RS17520 () | 2371386..2372201 | - | 816 | WP_001135560.1 | prolipoprotein diacylglyceryl transferase | - |
| EEL44_RS17525 () | 2372230..2373024 | - | 795 | WP_001019422.1 | sulfite exporter TauE/SafE family protein | - |
| EEL44_RS17530 () | 2373034..2375280 | - | 2247 | WP_000952226.1 | phosphoenolpyruvate--protein phosphotransferase | - |
| EEL44_RS17535 () | 2375283..2375801 | - | 519 | WP_001911254.1 | RNA pyrophosphohydrolase | - |
| EEL44_RS17540 () | 2376432..2377097 | + | 666 | WP_000801223.1 | DNA mismatch repair endonuclease MutH | - |
| EEL44_RS17545 () | 2377314..2378348 | + | 1035 | WP_001200442.1 | NADP(H)-dependent aldo-keto reductase | - |
| EEL44_RS17550 () | 2378386..2378637 | - | 252 | WP_001249919.1 | hypothetical protein | - |
| EEL44_RS17555 () | 2379215..2380549 | - | 1335 | WP_000107102.1 | Transcriptional regulatory protein ZraR | VF |
| EEL44_RS17560 () | 2380823..2382355 | - | 1533 | WP_000128764.1 | lysine--tRNA ligase | - |
| EEL44_RS17570 () | 2383654..2384967 | - | 1314 | WP_000815019.1 | branched-chain amino acid transport system II carrier protein | - |
| EEL44_RS17575 () | 2385276..2385998 | + | 723 | WP_000856169.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| EEL44_RS17580 () | 2386086..2387357 | + | 1272 | WP_000597951.1 | ATP-dependent RNA helicase SrmB | - |
| EEL44_RS17585 () | 2387479..2389068 | - | 1590 | WP_000013192.1 | peptide chain release factor 3 | - |
| EEL44_RS17590 () | 2389325..2389972 | - | 648 | WP_000854920.1 | LexA family transcriptional regulator | - |
| EEL44_RS17595 () | 2390090..2390341 | + | 252 | WP_000451746.1 | helix-turn-helix domain-containing protein | - |
| EEL44_RS17600 () | 2390397..2391266 | + | 870 | WP_001205850.1 | hypothetical protein | - |
| EEL44_RS17605 () | 2391307..2391915 | + | 609 | WP_001918295.1 | hypothetical protein | - |
| EEL44_RS17610 () | 2391902..2392450 | + | 549 | WP_000848909.1 | lytic transglycosylase domain-containing protein | - |
| EEL44_RS17615 () | 2392447..2392746 | + | 300 | WP_000210564.1 | flagellar transcriptional regulator FlhD | - |
| EEL44_RS17620 () | 2392743..2393276 | + | 534 | WP_000566755.1 | hypothetical protein | - |
| EEL44_RS17625 () | 2393334..2393765 | + | 432 | WP_000183214.1 | hypothetical protein | - |
| EEL44_RS17630 () | 2393798..2397367 | - | 3570 | WP_000263683.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| EEL44_RS17635 () | 2397371..2398759 | - | 1389 | WP_000755289.1 | conjugal transfer protein TraH | - |
| EEL44_RS17640 () | 2398762..2399706 | - | 945 | WP_001260107.1 | thioredoxin family protein | - |
| EEL44_RS17645 () | 2399963..2400922 | - | 960 | WP_000198593.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| EEL44_RS17650 () | 2401210..2401683 | + | 474 | WP_000777554.1 | Dihydrofolate reductase type 1 | ARG |
| EEL44_RS17655 () | 2401818..2402213 | + | 396 | WP_000096366.1 | hypothetical protein | - |
| EEL44_RS17660 () | 2402411..2402821 | + | 411 | WP_000592337.1 | helix-turn-helix transcriptional regulator | - |
| EEL44_RS17665 () | 2402958..2403254 | + | 297 | WP_001919795.1 | DUF1801 domain-containing protein | - |
| EEL44_RS17670 () | 2403354..2404055 | + | 702 | WP_001901434.1 | helix-turn-helix transcriptional regulator | - |
| EEL44_RS17675 () | 2404052..2404456 | - | 405 | WP_000023761.1 | VOC family protein | - |
| EEL44_RS17680 () | 2404728..2405435 | - | 708 | WP_000989526.1 | hypothetical protein | - |
| EEL44_RS17685 () | 2405525..2406598 | - | 1074 | WP_001207590.1 | toprim domain-containing protein | - |
| EEL44_RS17690 () | 2406689..2407030 | - | 342 | WP_001081787.1 | hypothetical protein | - |
| EEL44_RS17695 () | 2407030..2407527 | - | 498 | WP_000797297.1 | DNA repair protein RadC | - |
| EEL44_RS17700 () | 2407612..2409267 | - | 1656 | WP_001016320.1 | VWA domain-containing protein | - |
| EEL44_RS17705 () | 2409337..2409777 | - | 441 | WP_001192023.1 | hypothetical protein | - |
| EEL44_RS17710 () | 2409839..2410792 | - | 954 | WP_000027441.1 | DUF3150 domain-containing protein | - |
| EEL44_RS17715 () | 2410891..2411658 | - | 768 | WP_000970189.1 | hypothetical protein | - |
| EEL44_RS17720 () | 2411658..2412617 | - | 960 | WP_000139695.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| EEL44_RS17725 () | 2412827..2413843 | - | 1017 | WP_000862956.1 | YqaJ viral recombinase family protein | - |
| EEL44_RS21125 () | 2413904..2414047 | - | 144 | WP_000167277.1 | hypothetical protein | - |
| EEL44_RS17730 () | 2414129..2414947 | - | 819 | WP_000414662.1 | phage recombination protein Bet | - |
| EEL44_RS17735 () | 2415027..2415446 | - | 420 | WP_000795985.1 | single-stranded DNA-binding protein | - |
| EEL44_RS17740 () | 2415462..2415788 | - | 327 | WP_000455723.1 | hypothetical protein | - |
| EEL44_RS17745 () | 2416156..2416758 | + | 603 | WP_000035785.1 | hypothetical protein | - |
| EEL44_RS17750 () | 2416867..2417550 | + | 684 | WP_001082313.1 | endonuclease | - |
| EEL44_RS17755 () | 2417781..2418797 | + | 1017 | WP_001918293.1 | ATP-binding protein | - |
| EEL44_RS17760 () | 2418905..2420404 | + | 1500 | WP_001920874.1 | IS21 family transposase ISCte8 | Transposase |
| EEL44_RS17765 () | 2420394..2421149 | + | 756 | WP_000546748.1 | IS21 family transposase ISAlde2 | Transposase |
| EEL44_RS17770 () | 2421280..2422845 | + | 1566 | WP_001918292.1 | hypothetical protein | - |
| EEL44_RS17775 () | 2422936..2426628 | - | 3693 | WP_000805082.1 | conjugal transfer protein TraN | - |
| EEL44_RS17780 () | 2426631..2427659 | - | 1029 | WP_000735886.1 | TraU family protein | - |
| EEL44_RS17785 () | 2427643..2428767 | - | 1125 | WP_001189235.1 | hypothetical protein | - |
| EEL44_RS17790 () | 2428778..2429290 | - | 513 | WP_001166558.1 | S26 family signal peptidase | - |
| EEL44_RS17795 () | 2429274..2429621 | - | 348 | WP_001044650.1 | hypothetical protein | - |
| EEL44_RS17800 () | 2429614..2432013 | - | 2400 | WP_000648042.1 | type IV secretion system protein TraC | - |
| EEL44_RS17805 () | 2432013..2432705 | - | 693 | WP_001228926.1 | DsbC family protein | - |
| EEL44_RS17810 () | 2432837..2433775 | - | 939 | WP_000356587.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| EEL44_RS17815 () | 2433768..2434559 | - | 792 | WP_000095578.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| EEL44_RS17820 () | 2434780..2435166 | - | 387 | WP_000180223.1 | hypothetical protein | - |
| EEL44_RS17825 () | 2435163..2435735 | - | 573 | WP_001944091.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EEL44_RS17830 () | 2435810..2437099 | - | 1290 | WP_000647305.1 | TraB/VirB10 family protein | - |
| EEL44_RS17835 () | 2437102..2437998 | - | 897 | WP_001911237.1 | type-F conjugative transfer system secretin TraK | - |
| EEL44_RS17840 () | 2437982..2438608 | - | 627 | WP_000667170.1 | hypothetical protein | - |
| EEL44_RS17845 () | 2438605..2438886 | - | 282 | WP_000433891.1 | type IV conjugative transfer system protein TraL | - |
| EEL44_RS17855 () | 2439175..2439762 | + | 588 | WP_001167482.1 | hypothetical protein | - |
| EEL44_RS17860 () | 2439789..2440424 | - | 636 | WP_000033757.1 | DUF4400 domain-containing protein | - |
| EEL44_RS17865 () | 2440411..2440971 | - | 561 | WP_000546514.1 | hypothetical protein | - |
| EEL44_RS17870 () | 2440981..2442801 | - | 1821 | WP_000661888.1 | conjugative transfer system coupling protein TraD | - |
| EEL44_RS17875 () | 2442850..2445000 | - | 2151 | WP_000475916.1 | TraI domain-containing protein | - |
| EEL44_RS17880 () | 2445122..2445937 | - | 816 | WP_001125250.1 | abortive infection family protein | - |
| EEL44_RS17885 () | 2445972..2446742 | - | 771 | WP_000158025.1 | hypothetical protein | - |
| EEL44_RS17890 () | 2446769..2448820 | - | 2052 | WP_000279702.1 | protease Lon-related BREX system protein BrxL | - |
| EEL44_RS17895 () | 2448859..2451162 | - | 2304 | WP_000567536.1 | PglZ domain-containing protein | - |
| EEL44_RS17900 () | 2451175..2454915 | - | 3741 | WP_000779609.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| EEL44_RS17905 () | 2454920..2458609 | - | 3690 | WP_000152592.1 | BREX system P-loop protein BrxC | - |
| EEL44_RS17910 () | 2458622..2459170 | - | 549 | WP_001115853.1 | hypothetical protein | - |
| EEL44_RS17915 () | 2459154..2459954 | - | 801 | WP_000653856.1 | DUF1819 family protein | - |
| EEL44_RS17920 () | 2459972..2460892 | - | 921 | WP_000180270.1 | WYL domain-containing protein | - |
| EEL44_RS17925 () | 2461210..2461509 | - | 300 | WP_000284114.1 | hypothetical protein | - |
| EEL44_RS17930 () | 2461597..2462502 | - | 906 | WP_000196209.1 | DNA polymerase III subunit epsilon | - |
| EEL44_RS17935 () | 2462886..2463143 | - | 258 | WP_000182836.1 | hypothetical protein | - |
| EEL44_RS17940 () | 2463142..2463591 | + | 450 | WP_000116661.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| EEL44_RS17945 () | 2463599..2463832 | + | 234 | Protein_2153 | DNA polymerase V subunit UmuC | - |
| EEL44_RS17950 () | 2464021..2464521 | + | 501 | Protein_2154 | site-specific integrase | - |
| EEL44_RS17955 () | 2464582..2465793 | + | 1212 | WP_001122813.1 | IS256 family transposase ISSod18 | Transposase |
| EEL44_RS17960 () | 2465830..2467137 | - | 1308 | Protein_2156 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| EEL44_RS17970 () | 2467608..2468423 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| EEL44_RS17975 () | 2468484..2469287 | + | 804 | WP_001082316.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| EEL44_RS17980 () | 2469287..2470123 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| EEL44_RS17985 () | 2470230..2470634 | - | 405 | Protein_2160 | IS91 family transposase ISPps1 | Transposase |
| EEL44_RS17990 () | 2470746..2471051 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| EEL44_RS17995 () | 2471079..2472293 | - | 1215 | WP_000214119.1 | Bicyclomycin resistance protein | ARG |
| EEL44_RS21180 () | 2472510..2472956 | - | 447 | Protein_2163 | DUF3363 domain-containing protein | - |
| EEL44_RS18005 () | 2473425..2474918 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| EEL44_RS21185 () | 2475030..2475221 | - | 192 | Protein_2165 | hypothetical protein | - |
| EEL44_RS18015 () | 2475336..2478314 | - | 2979 | WP_000985631.1 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| EEL44_RS18020 () | 2478452..2479030 | - | 579 | Protein_2167 | Tn3 family transposase TnpA_IS3000 | Transposase |
| EEL44_RS18025 () | 2479434..2480477 | + | 1044 | Protein_2168 | translesion error-prone DNA polymerase V subunit UmuC | - |
| EEL44_RS18030 () | 2480488..2480931 | - | 444 | WP_000348524.1 | hypothetical protein | - |
| EEL44_RS18035 () | 2481396..2482370 | + | 975 | WP_000497807.1 | ParM/StbA family protein | - |
| EEL44_RS18040 () | 2482373..2482642 | + | 270 | WP_001995600.1 | hypothetical protein | - |
| EEL44_RS18045 () | 2482644..2483885 | + | 1242 | WP_001218618.1 | Prophage integrase IntS ; Integrase | Integrase |
| EEL44_RS18050 () | 2484015..2486033 | - | 2019 | WP_000211147.1 | ATP-binding protein | - |
| EEL44_RS18055 () | 2486179..2486367 | - | 189 | WP_000127615.1 | hypothetical protein | - |
| EEL44_RS18065 () | 2487108..2489165 | + | 2058 | WP_123072396.1 | putative signaling protein | VF |
| EEL44_RS18070 () | 2489154..2489603 | - | 450 | WP_000214238.1 | Ribosomal-protein-alanine acetyltransferase | VF |
| EEL44_RS18075 () | 2489600..2490007 | - | 408 | WP_000953212.1 | DNA polymerase III subunit psi | - |
| EEL44_RS18080 () | 2490118..2490621 | - | 504 | WP_000908540.1 | N-acetyltransferase | - |
| EEL44_RS18085 () | 2490605..2491132 | - | 528 | WP_000932672.1 | SCP2 domain-containing protein | - |
| EEL44_RS18090 () | 2491365..2493419 | + | 2055 | WP_001111411.1 | bifunctional diguanylate cyclase/phosphodiesterase | - |
| EEL44_RS18095 () | 2493527..2494540 | + | 1014 | WP_000421327.1 | U32 family peptidase | - |
| EEL44_RS18100 () | 2494552..2495430 | + | 879 | WP_000872504.1 | U32 family peptidase | - |
| EEL44_RS18105 () | 2495483..2496820 | - | 1338 | WP_000981941.1 | sodium-coupled multidrug efflux MATE transporter VcrM | - |
| EEL44_RS18110 () | 2496867..2497274 | - | 408 | WP_000887847.1 | MarR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|