MGE detailed information

MGE type: Conjugative plasmid        MGE length: 171829 bp
Accession: NZ_CP033514        Location: 1..171829         Organism: Vibrio cholerae strain E4       Replicon: plasmid pVCR94


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EEL44_RS05320 () 1427..1630 + 204 Protein_1 hypothetical protein -
EEL44_RS05325 () 1799..2746 + 948 WP_123072385.1 IS30 family transposase ISAs2 Transposase
EEL44_RS05330 () 2734..4065 - 1332 WP_123072386.1 ISL3 family transposase ISPst9 Transposase
EEL44_RS05335 () 4087..4599 - 513 WP_004863699.1 Lipoprotein signal peptidase VF
EEL44_RS05340 () 4603..5499 - 897 WP_024126909.1 cation diffusion facilitator family transporter -
EEL44_RS05345 () 5595..6002 + 408 WP_024126910.1 Cd(II)/Pb(II)-responsive transcriptional regulator -
EEL44_RS05350 () 6089..6550 + 462 Protein_7 hypothetical protein -
EEL44_RS05360 () 6756..6974 + 219 WP_000362482.1 hypothetical protein -
EEL44_RS05365 () 7068..7685 + 618 WP_024126913.1 hypothetical protein -
EEL44_RS05375 () 7897..8196 + 300 WP_021293626.1 hypothetical protein -
EEL44_RS05380 () 8288..8776 - 489 WP_024126914.1 hypothetical protein -
EEL44_RS05385 () 8791..10983 - 2193 WP_024126915.1 DNA topoisomerase 3 -
EEL44_RS05390 () 10983..11216 - 234 WP_001191892.1 hypothetical protein -
EEL44_RS05395 () 11198..11815 - 618 WP_001249396.1 hypothetical protein -
EEL44_RS05400 () 11982..14960 + 2979 WP_011872892.1 hypothetical protein Relaxase
EEL44_RS05405 () 14957..16822 + 1866 WP_000178857.1 conjugative transfer system coupling protein TraD -
EEL44_RS05410 () 16833..17417 + 585 WP_000332866.1 hypothetical protein -
EEL44_RS05415 () 17374..18003 + 630 WP_000743450.1 DUF4400 domain-containing protein -
EEL44_RS05420 () 18013..18459 + 447 WP_000122506.1 hypothetical protein -
EEL44_RS05425 () 18469..18846 + 378 WP_000869261.1 hypothetical protein -
EEL44_RS05430 () 18846..19508 + 663 WP_021293632.1 hypothetical protein -
EEL44_RS20995 () 19689..19832 + 144 WP_001275801.1 hypothetical protein -
EEL44_RS05435 () 19832..20209 + 378 WP_000509509.1 hypothetical protein -
EEL44_RS05440 () 20354..20634 + 281 Protein_24 type IV conjugative transfer system protein TraL -
EEL44_RS05445 () 20631..21257 + 627 WP_001049716.1 hypothetical protein -
EEL44_RS05450 () 21241..22158 + 918 WP_000794249.1 type-F conjugative transfer system secretin TraK -
EEL44_RS05455 () 22158..23471 + 1314 WP_164491403.1 conjugal transfer protein TraB -
EEL44_RS05460 () 23468..24046 + 579 WP_000793435.1 type IV conjugative transfer system lipoprotein TraV -
EEL44_RS05465 () 24050..24442 + 393 WP_069369997.1 conjugal transfer protein TraA -
EEL44_RS05470 () 24643..30174 + 5532 WP_024126918.1 DUF4165 domain-containing protein -
EEL44_RS05475 () 30323..31030 + 708 WP_001259347.1 DsbC family protein -
EEL44_RS05480 () 31027..33474 + 2448 WP_011872839.1 type IV secretion system protein TraC -
EEL44_RS05485 () 33489..33806 + 318 WP_011872858.1 hypothetical protein -
EEL44_RS05490 () 33803..34333 + 531 WP_021293639.1 S26 family signal peptidase -
EEL44_RS05495 () 34296..35561 + 1266 WP_121926692.1 conjugal transfer protein TraW -
EEL44_RS05500 () 35558..36229 + 672 WP_024126920.1 EAL domain-containing protein -
EEL44_RS05505 () 36226..37233 + 1008 WP_024126921.1 TraU family protein -
EEL44_RS05510 () 37337..40147 + 2811 WP_123072387.1 conjugal transfer mating pair stabilization protein TraN -
EEL44_RS05515 () 40186..41046 - 861 WP_000709517.1 hypothetical protein -
EEL44_RS05520 () 41169..41810 - 642 WP_024126923.1 hypothetical protein -
EEL44_RS05525 () 42103..42423 + 321 WP_024126924.1 hypothetical protein -
EEL44_RS05530 () 42727..42912 + 186 WP_001186916.1 hypothetical protein -
EEL44_RS05535 () 43131..44099 + 969 WP_024126925.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
EEL44_RS05540 () 44110..45015 + 906 WP_021293644.1 hypothetical protein -
EEL44_RS05545 () 45076..45606 + 531 WP_021293645.1 single-stranded DNA-binding protein -
EEL44_RS05550 () 45701..46690 + 990 WP_021293646.1 phage recombination protein Bet -
EEL44_RS05555 () 46752..47762 + 1011 WP_000706865.1 YqaJ viral recombinase family protein -
EEL44_RS05565 () 47962..49239 + 1278 WP_024126928.1 DUF3150 domain-containing protein -
EEL44_RS05570 () 49324..51120 + 1797 WP_024126929.1 VWA domain-containing protein -
EEL44_RS05575 () 51235..51723 + 489 WP_024126930.1 DUF3085 domain-containing protein -
EEL44_RS05580 () 51789..52121 + 333 WP_123072388.1 hypothetical protein -
EEL44_RS05585 () 52386..52925 + 540 WP_000018872.1 hypothetical protein -
EEL44_RS05590 () 53006..53506 + 501 WP_000793769.1 hypothetical protein -
EEL44_RS05595 () 53580..54464 + 885 WP_123072389.1 DNA adenine modification methylase -
EEL44_RS05600 () 54530..54754 + 225 WP_021293651.1 2Fe-2S iron-sulfur cluster binding domain-containing protein -
EEL44_RS05605 () 54816..55205 + 390 WP_024126933.1 hypothetical protein -
EEL44_RS05610 () 55195..55641 + 447 WP_021293653.1 hypothetical protein -
EEL44_RS05620 () 55979..56170 + 192 WP_000651508.1 hypothetical protein -
EEL44_RS05625 () 56215..56592 + 378 WP_123072394.1 topoisomerase II -
EEL44_RS05630 () 56784..57128 + 345 WP_021293655.1 hypothetical protein -
EEL44_RS05635 () 57206..57508 + 303 WP_000410925.1 hypothetical protein -
EEL44_RS05640 () 57586..59211 + 1626 WP_000201432.1 DNA cytosine methyltransferase -
EEL44_RS05645 () 59272..59703 + 432 WP_000687894.1 hypothetical protein -
EEL44_RS05650 () 59777..60331 + 555 WP_021293657.1 hypothetical protein -
EEL44_RS05655 () 60564..60950 + 387 WP_024126935.1 hypothetical protein -
EEL44_RS05660 () 61038..63488 + 2451 WP_024126936.1 hypothetical protein -
EEL44_RS05665 () 63690..63893 + 204 WP_000050848.1 hypothetical protein -
EEL44_RS05670 () 63965..64570 + 606 WP_021293659.1 5'-deoxynucleotidase -
EEL44_RS05675 () 64563..64832 + 270 WP_000184110.1 hypothetical protein -
EEL44_RS05680 () 64846..65064 + 219 WP_000260293.1 hypothetical protein -
EEL44_RS05685 () 65138..65695 + 558 WP_024126937.1 hypothetical protein -
EEL44_RS05690 () 65770..66621 + 852 WP_024126938.1 hypothetical protein -
EEL44_RS21000 () 66826..66972 + 147 WP_001032043.1 hypothetical protein -
EEL44_RS05695 () 67079..67465 + 387 WP_001077337.1 hypothetical protein -
EEL44_RS05700 () 67643..69370 + 1728 WP_024126939.1 toprim domain-containing protein -
EEL44_RS05705 () 69357..69635 + 279 WP_000268337.1 hypothetical protein -
EEL44_RS05710 () 69708..69947 + 240 WP_000714162.1 permease -
EEL44_RS21005 () 69957..70073 + 117 WP_000338626.1 hypothetical protein -
EEL44_RS05715 () 70194..70568 + 375 WP_000868821.1 hypothetical protein -
EEL44_RS05720 () 70682..71407 + 726 WP_000988732.1 hypothetical protein -
EEL44_RS05725 () 71648..75801 + 4154 Protein_81 Putative deoxyribonuclease RhsC VF
EEL44_RS05730 () 75798..76070 + 273 WP_000787563.1 MafI family immunity protein -
EEL44_RS05740 () 76366..76665 + 300 WP_011872911.1 hypothetical protein -
EEL44_RS05745 () 76832..77284 + 453 WP_000791469.1 hypothetical protein -
EEL44_RS05750 () 77300..77902 - 603 WP_000278322.1 hypothetical protein -
EEL44_RS05755 () 78190..78471 + 282 WP_000575657.1 hypothetical protein -
EEL44_RS05765 () 78770..79306 + 537 WP_000949433.1 hypothetical protein -
EEL44_RS05770 () 79309..80319 + 1011 WP_000543934.1 IS91 family transposase ISWz1 Transposase
EEL44_RS05775 () 80324..81193 + 870 WP_000997323.1 3'-5' exonuclease -
EEL44_RS05780 () 81190..81681 + 492 WP_000139717.1 hypothetical protein -
EEL44_RS05785 () 81998..82873 + 876 WP_001097010.1 DNA replication terminus site-binding protein -
EEL44_RS05790 () 83026..84066 + 1041 WP_000101568.1 DNA-binding protein -
EEL44_RS05800 () 84353..85864 + 1512 WP_000811656.1 ATP-dependent helicase -
EEL44_RS05805 () 85975..87015 + 1041 WP_001326396.1 conjugal transfer protein TraF -
EEL44_RS05810 () 87017..88450 + 1434 WP_024126941.1 conjugal transfer protein TraH -
EEL44_RS05815 () 88463..92077 + 3615 WP_000534551.1 conjugal transfer protein TraG N-terminal domain-containing protein -
EEL44_RS05820 () 92115..92477 - 363 WP_000683483.1 hypothetical protein -
EEL44_RS05825 () 93193..93465 + 273 WP_000356489.1 helix-turn-helix domain-containing protein -
EEL44_RS05830 () 93465..93998 + 534 WP_000790610.1 transglycosylase SLT domain-containing protein -
EEL44_RS05835 () 94009..94617 + 609 WP_000891157.1 hypothetical protein -
EEL44_RS05840 () 94614..95165 + 552 WP_001020646.1 hypothetical protein -
EEL44_RS05845 () 95225..95644 - 420 WP_000651490.1 H-NS histone family protein -
EEL44_RS05850 () 95646..95939 - 294 WP_000919078.1 hypothetical protein -
EEL44_RS05855 () 95956..96939 - 984 WP_000077458.1 ParM/StbA family protein -
EEL44_RS05860 () 97438..97977 + 540 WP_001447712.1 hypothetical protein -
EEL44_RS05865 () 97982..98269 + 288 WP_000127321.1 hypothetical protein -
EEL44_RS05870 () 98254..99354 + 1101 WP_000350011.1 plasmid replication protein -
EEL44_RS05885 () 100391..100825 - 435 WP_000883925.1 hypothetical protein -
EEL44_RS05890 () 100843..101958 - 1116 WP_000946102.1 phosphoadenosine phosphosulfate reductase family protein -
EEL44_RS05895 () 102227..102835 + 609 WP_000849071.1 hypothetical protein -
EEL44_RS05900 () 102840..103361 + 522 WP_000393785.1 hypothetical protein -
EEL44_RS05905 () 103364..103885 + 522 WP_000805800.1 hypothetical protein -
EEL44_RS05910 () 103982..104455 + 474 WP_000057877.1 hypothetical protein -
EEL44_RS05915 () 104466..104759 + 294 WP_001370730.1 hypothetical protein -
EEL44_RS05920 () 104764..105618 + 855 WP_000539392.1 hypothetical protein -
EEL44_RS05925 () 105618..106577 + 960 WP_000829616.1 S49 family peptidase -
EEL44_RS05930 () 106593..107453 + 861 WP_000139698.1 DsbA family protein -
EEL44_RS05935 () 107487..107915 + 429 WP_000591074.1 hypothetical protein -
EEL44_RS05940 () 107972..108331 + 360 WP_000422768.1 hypothetical protein -
EEL44_RS05945 () 108331..108777 + 447 WP_000919345.1 Fe3+-siderophore ABC transporter permease -
EEL44_RS05950 () 108774..109292 + 519 WP_000210756.1 nitrite reductase -
EEL44_RS05955 () 109292..109522 + 231 WP_000972663.1 hypothetical protein -
EEL44_RS05960 () 109509..110366 + 858 WP_001167032.1 hypothetical protein -
EEL44_RS05970 () 110597..111124 + 528 WP_001236377.1 thermonuclease family protein -
EEL44_RS05975 () 111182..111454 + 273 WP_001043047.1 HU family DNA-binding protein -
EEL44_RS05980 () 111542..111835 + 294 WP_001239997.1 chromosome segregation protein ParM -
EEL44_RS05985 () 111862..112164 - 303 WP_000124640.1 XRE family transcriptional regulator Antitoxin Detail
EEL44_RS05990 () 112169..112519 - 351 WP_000270043.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
EEL44_RS05995 () 112682..113230 + 549 WP_001061574.1 transcriptional regulator -
EEL44_RS06005 () 113571..113765 + 195 WP_000343597.1 hypothetical protein -
EEL44_RS06010 () 113776..114147 + 372 WP_000516916.1 hypothetical protein -
EEL44_RS06015 () 114140..114610 + 471 WP_001281821.1 hypothetical protein -
EEL44_RS06020 () 114625..114960 - 336 WP_000683476.1 hypothetical protein -
EEL44_RS06025 () 115057..115545 + 489 WP_001273096.1 DUF1643 domain-containing protein -
EEL44_RS06030 () 115548..116045 + 498 WP_000062185.1 hypothetical protein -
EEL44_RS06035 () 116311..117015 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
EEL44_RS06050 () 117373..117651 - 279 WP_000015696.1 tyrosine-type recombinase/integrase -
EEL44_RS06055 () 117677..117862 + 186 WP_071533317.1 hypothetical protein -
EEL44_RS06060 () 117859..118197 - 339 WP_002310911.1 hypothetical protein -
EEL44_RS06065 () 118101..119291 - 1191 WP_001297013.1 Tetracycline resistance protein, class C ARG
EEL44_RS06075 () 119384..120043 + 660 WP_001038045.1 tetracycline resistance transcriptional repressor TetR(C) -
EEL44_RS06080 () 120030..120569 + 540 Protein_142 helix-turn-helix transcriptional regulator -
EEL44_RS06085 () 120642..121346 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
EEL44_RS06090 () 121404..121934 - 531 Protein_144 histidine-type phosphatase -
EEL44_RS06095 () 122056..122541 - 486 WP_000874189.1 hypothetical protein -
EEL44_RS06100 () 122566..123051 - 486 WP_001267177.1 TlpA family protein disulfide reductase -
EEL44_RS06105 () 123038..123733 - 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
EEL44_RS06110 () 123738..124868 - 1131 WP_000729220.1 ABC transporter permease -
EEL44_RS06115 () 124858..126141 - 1284 WP_000964653.1 ABC transporter permease -
EEL44_RS06120 () 126144..127523 - 1380 WP_000119836.1 DUF2318 domain-containing protein -
EEL44_RS06125 () 127627..128154 - 528 WP_000178050.1 iron transporter -
EEL44_RS06130 () 128195..130081 - 1887 WP_000118029.1 FTR1 family iron permease -
EEL44_RS06140 () 130428..131243 - 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
EEL44_RS06145 () 131426..131932 - 507 WP_000949452.1 protein disulfide oxidoreductase -
EEL44_RS06150 () 131922..132080 - 159 WP_000449408.1 DsbA family protein -
EEL44_RS06165 () 132543..133240 + 698 Protein_156 IS1 family transposase IS1X2 Transposase
EEL44_RS06170 () 133255..134418 + 1164 Protein_157 IS4 family transposase IS10R Transposase
EEL44_RS06175 () 134428..134799 - 372 WP_035689358.1 Transposon Tn10 TetD protein VF
EEL44_RS06180 () 134932..135525 + 594 WP_000428546.1 tetracyline resistance-associated transcriptional repressor TetC -
EEL44_RS06185 () 135638..136843 - 1206 WP_001089068.1 Tetracycline resistance protein, class B ARG
EEL44_RS06190 () 136925..137548 + 624 WP_000088605.1 Tetracycline repressor protein class B from transposon Tn10 VF
EEL44_RS06195 () 137526..138212 - 687 WP_001284954.1 winged helix-turn-helix domain-containing protein -
EEL44_RS06200 () 138220..138579 - 360 WP_123072390.1 amino acid-binding protein -
EEL44_RS06205 () 138624..139604 + 981 WP_000019450.1 IS5 family transposase ISKpn26 Transposase
EEL44_RS06210 () 139799..140062 - 264 WP_049802299.1 antibiotic biosynthesis monooxygenase -
EEL44_RS06215 () 140059..140756 - 698 Protein_166 IS1 family transposase IS1R Transposase
EEL44_RS06225 () 141035..141694 + 660 WP_000412211.1 Chloramphenicol acetyltransferase ARG
EEL44_RS06230 () 141895..142272 - 378 WP_000656305.1 GNAT family N-acetyltransferase -
EEL44_RS06235 () 142339..145305 - 2967 WP_001138064.1 Tn3 family transposase TnpA_TnAs3 Transposase
EEL44_RS06240 () 145308..145868 - 561 WP_000147567.1 Tn3 family transposase TnpR_TnAs3 Transposase
EEL44_RS06245 () 145994..146128 - 135 WP_164491402.1 DUF3330 domain-containing protein -
EEL44_RS06255 () 146134..146838 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
EEL44_RS06260 () 146874..147401 + 528 WP_074137032.1 Tn3 family transposase TnpR_ISMex22 Transposase
EEL44_RS06265 () 147508..148439 + 932 Protein_174 IS3 family transposase -
EEL44_RS06270 () 148478..149560 - 1083 WP_123072391.1 IS3 family transposase ISGur10 Transposase
EEL44_RS06275 () 149557..149955 - 399 WP_123072392.1 IS3 family transposase ISAnsp11 Transposase
EEL44_RS06280 () 150027..150248 + 222 Protein_177 IS3 family transposase ISAba14 Transposase
EEL44_RS06285 () 150348..151151 + 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
EEL44_RS06290 () 151151..151987 + 837 WP_000480968.1 hypothetical protein ARG
EEL44_RS06295 () 152153..153019 + 867 WP_032489168.1 Beta-lactamase PSE-1 ARG
EEL44_RS06300 () 152998..153267 - 270 WP_123072393.1 hypothetical protein -
EEL44_RS06305 () 153251..153841 - 591 Protein_182 heteromeric transposase endonuclease subunit TnsA -
EEL44_RS06310 () 153909..154034 + 126 Protein_183 recombinase family protein -
EEL44_RS06315 () 154084..154788 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
EEL44_RS21040 () 154850..155122 - 273 Protein_185 DUF3330 domain-containing protein -
EEL44_RS06325 () 155325..156338 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
EEL44_RS06330 () 156495..156968 + 474 WP_001355915.1 Dihydrofolate reductase type 1 ARG
EEL44_RS06335 () 157169..157516 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
EEL44_RS06340 () 157510..158349 + 840 WP_000259031.1 Dihydropteroate synthase ARG
EEL44_RS06350 () 158477..158977 + 501 WP_000376623.1 GNAT family N-acetyltransferase -
EEL44_RS06360 () 159484..160248 + 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
EEL44_RS06365 () 160312..160569 + 258 WP_001375131.1 DDE-type integrase/transposase/recombinase -
EEL44_RS06380 () 160823..161560 + 738 WP_001366550.1 Tn3 family transposase TnpR_TnEc1 Transposase
EEL44_RS06385 () 161557..161781 + 225 WP_000743213.1 hypothetical protein -
EEL44_RS06390 () 161992..163485 + 1494 WP_001120888.1 IS91 family transposase ISVsa3 Transposase
EEL44_RS06400 () 163721..163963 - 243 Protein_196 phosphoglucosamine mutase -
EEL44_RS06405 () 164050..164865 - 816 WP_001043260.1 Dihydropteroate synthase ARG
EEL44_RS06415 () 165172..165483 + 312 WP_000338945.1 hypothetical protein -
EEL44_RS06420 () 165657..166442 + 786 WP_001151304.1 Sporulation initiation inhibitor protein Soj VF
EEL44_RS06425 () 166446..167627 + 1182 WP_001207227.1 ParB/RepB/Spo0J family partition protein -
EEL44_RS06430 () 167676..167948 + 273 WP_000703827.1 helix-turn-helix domain-containing protein -
EEL44_RS06435 () 168011..168646 - 636 WP_000074431.1 N-6 DNA methylase -
EEL44_RS21060 () 168738..168881 - 144 WP_000939033.1 hypothetical protein -
EEL44_RS06440 () 169200..169577 + 378 WP_001125904.1 hypothetical protein -
EEL44_RS21165 () 169570..169851 + 282 WP_000044823.1 hypothetical protein -
EEL44_RS06450 () 169826..170500 + 675 WP_000344149.1 hypothetical protein -
EEL44_RS06455 () 170568..170999 + 432 WP_005507681.1 hypothetical protein -
EEL44_RS06460 () 171005..171316 + 312 WP_002210541.1 hypothetical protein -
EEL44_RS06465 () 171325..171825 + 501 WP_024126904.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance