MGE detailed information
MGE type: Prophage MGE length: 65259 bp
Accession: NZ_CP033020 Location: 2258574..2323832 Organism: Escherichia coli ATCC 8739 Replicon: chromosome
Accession: NZ_CP033020 Location: 2258574..2323832 Organism: Escherichia coli ATCC 8739 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9Q99_RS10760 (2255949) | 2255949..2258375 | - | 2427 | WP_000041681.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| D9Q99_RS10765 (2258574) | 2258574..2258879 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| D9Q99_RS10770 (2258987) | 2258987..2259697 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| D9Q99_RS10775 (2259700) | 2259700..2260260 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| D9Q99_RS10780 (2260295) | 2260295..2260636 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| D9Q99_RS10785 (2260771) | 2260771..2261097 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| D9Q99_RS10790 (2261303) | 2261303..2262517 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| D9Q99_RS10795 (2262529) | 2262529..2263548 | + | 1020 | WP_000836051.1 | Zn-dependent oxidoreductase | - |
| D9Q99_RS10800 (2263736) | 2263736..2265016 | - | 1281 | WP_000876960.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| D9Q99_RS10805 (2265051) | 2265051..2265302 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| D9Q99_RS10810 (2265375) | 2265375..2267852 | - | 2478 | WP_000048362.1 | exonuclease | - |
| D9Q99_RS10815 (2267945) | 2267945..2268136 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| D9Q99_RS10820 (2268133) | 2268133..2268321 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| D9Q99_RS10825 (2268889) | 2268889..2269107 | - | 219 | WP_001171942.1 | protein YdfC | - |
| D9Q99_RS10830 (2269137) | 2269137..2269265 | - | 129 | WP_000344964.1 | protein YdfB | - |
| D9Q99_RS10835 (2269267) | 2269267..2269422 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| D9Q99_RS10840 (2269589) | 2269589..2269996 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| D9Q99_RS10845 (2270080) | 2270080..2270310 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| D9Q99_RS10850 (2270294) | 2270294..2270815 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| D9Q99_RS10855 (2270796) | 2270796..2271761 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| D9Q99_RS10860 (2271802) | 2271802..2272224 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| D9Q99_RS10865 (2272221) | 2272221..2272710 | + | 490 | Protein_2122 | class I SAM-dependent methyltransferase | - |
| D9Q99_RS10870 (2273188) | 2273188..2273609 | + | 422 | Protein_2123 | hypothetical protein | - |
| D9Q99_RS10875 (2274265) | 2274265..2275287 | + | 1023 | Protein_2124 | ISNCY family transposase ISCARN112 | Transposase |
| D9Q99_RS10880 (2275408) | 2275408..2275557 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| D9Q99_RS10885 (2276019) | 2276019..2276351 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| D9Q99_RS10890 (2276554) | 2276554..2276859 | - | 306 | WP_001326990.1 | protein YdfV | - |
| D9Q99_RS10895 (2276884) | 2276884..2277123 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| D9Q99_RS10900 (2277123) | 2277123..2277410 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| D9Q99_RS10905 (2277482) | 2277482..2277637 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| D9Q99_RS10910 (2277854) | 2277854..2278105 | + | 252 | WP_000980994.1 | protein Rem | - |
| D9Q99_RS10915 (2278172) | 2278172..2278450 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| D9Q99_RS10920 (2278452) | 2278452..2279501 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| D9Q99_RS10925 (2279515) | 2279515..2280267 | + | 753 | WP_001047134.1 | antitermination protein | - |
| D9Q99_RS10930 (2280545) | 2280545..2280634 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| D9Q99_RS10935 (2280689) | 2280689..2280901 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| D9Q99_RS10940 (2281202) | 2281202..2281417 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| D9Q99_RS10945 (2281781) | 2281781..2281951 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| D9Q99_RS10950 (2282171) | 2282171..2282386 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| D9Q99_RS10955 (2282391) | 2282391..2282702 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| D9Q99_RS10960 (2282699) | 2282699..2283232 | + | 534 | WP_001092971.1 | lysozyme | - |
| D9Q99_RS10965 (2283229) | 2283229..2283726 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| D9Q99_RS10970 (2284089) | 2284089..2284301 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| D9Q99_RS10975 (2284312) | 2284312..2284500 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| D9Q99_RS10980 (2284503) | 2284503..2284568 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| D9Q99_RS10985 (2284648) | 2284648..2284803 | + | 156 | WP_001309517.1 | protein YnfN | - |
| D9Q99_RS10990 (2284975) | 2284975..2285148 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| D9Q99_RS10995 (2285300) | 2285300..2285710 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| D9Q99_RS11000 (2285768) | 2285768..2286001 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| D9Q99_RS11005 (2286390) | 2286390..2286935 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| D9Q99_RS11010 (2286910) | 2286910..2288835 | + | 1926 | WP_001027293.1 | phage terminase large subunit family protein | - |
| D9Q99_RS11015 (2288832) | 2288832..2289038 | + | 207 | WP_000198149.1 | gpW family protein | - |
| D9Q99_RS11020 (2289035) | 2289035..2290636 | + | 1602 | WP_001529148.1 | phage portal protein | - |
| D9Q99_RS11025 (2290617) | 2290617..2291936 | + | 1320 | WP_000123311.1 | S49 family peptidase | - |
| D9Q99_RS11030 (2291946) | 2291946..2292278 | + | 333 | WP_012304872.1 | head decoration protein | - |
| D9Q99_RS11035 (2292334) | 2292334..2293359 | + | 1026 | WP_000063254.1 | major capsid protein | - |
| D9Q99_RS11040 (2293401) | 2293401..2293796 | + | 396 | WP_000158875.1 | DNA-packaging protein FI | - |
| D9Q99_RS11045 (2293808) | 2293808..2294161 | + | 354 | WP_000785282.1 | head-tail joining protein | - |
| D9Q99_RS11050 (2294173) | 2294173..2294749 | + | 577 | Protein_2159 | phage tail protein | - |
| D9Q99_RS11055 (2294746) | 2294746..2295141 | + | 396 | WP_000683129.1 | phage minor tail U family protein | - |
| D9Q99_RS11060 (2295149) | 2295149..2295889 | + | 741 | WP_001361512.1 | phage tail protein | - |
| D9Q99_RS11065 (2295905) | 2295905..2296327 | + | 423 | WP_000479193.1 | phage minor tail protein G | - |
| D9Q99_RS11070 (2296309) | 2296309..2296743 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| D9Q99_RS11075 (2296736) | 2296736..2299297 | + | 2562 | WP_000840289.1 | phage tail tape measure protein | - |
| D9Q99_RS11080 (2299294) | 2299294..2299623 | + | 330 | WP_000847347.1 | phage tail protein | - |
| D9Q99_RS11085 (2299623) | 2299623..2300321 | + | 699 | WP_001152612.1 | phage minor tail protein L | - |
| D9Q99_RS11090 (2300327) | 2300327..2301070 | + | 744 | WP_012304874.1 | Mov34/MPN/PAD-1 family protein | - |
| D9Q99_RS11095 (2301067) | 2301067..2301639 | + | 573 | WP_000847668.1 | tail assembly protein | - |
| D9Q99_RS11100 (2301700) | 2301700..2305179 | + | 3480 | WP_000515744.1 | host specificity protein J | - |
| D9Q99_RS11105 (2305247) | 2305247..2305846 | + | 600 | WP_001233110.1 | hypothetical protein | VF |
| D9Q99_RS11110 (2305911) | 2305911..2308934 | + | 3024 | WP_000279128.1 | prophage tail fiber N-terminal domain-containing protein | - |
| D9Q99_RS11115 (2308934) | 2308934..2309509 | + | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| D9Q99_RS11120 (2309607) | 2309607..2310197 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| D9Q99_RS11125 (2310514) | 2310514..2310747 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| D9Q99_RS11130 (2310816) | 2310816..2310929 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| D9Q99_RS11135 (2311534) | 2311534..2312817 | + | 1284 | Protein_2176 | MHS family MFS transporter YdfJ | - |
| D9Q99_RS11140 (2312906) | 2312906..2314366 | + | 1461 | WP_000527806.1 | mannitol dehydrogenase family protein | - |
| D9Q99_RS11145 (2314402) | 2314402..2314605 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| D9Q99_RS11150 (2314782) | 2314782..2315468 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| D9Q99_RS11155 (2315557) | 2315557..2316303 | - | 747 | WP_001324973.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| D9Q99_RS11160 (2316440) | 2316440..2318485 | + | 2046 | WP_001437709.1 | peptidyl-dipeptidase Dcp | - |
| D9Q99_RS11165 (2318530) | 2318530..2319048 | - | 519 | WP_001024560.1 | 2-oxo-tetronate isomerase | - |
| D9Q99_RS11170 (2319324) | 2319324..2319716 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| D9Q99_RS11175 (2319971) | 2319971..2320861 | + | 891 | WP_000592826.1 | diguanylate cyclase DgcZ | - |
| D9Q99_RS11180 (2320976) | 2320976..2321080 | - | 105 | WP_211180496.1 | protein MgtT | - |
| D9Q99_RS11185 (2321080) | 2321080..2321175 | - | 96 | WP_000901367.1 | protein MgtS | - |
| D9Q99_RS11190 (2321302) | 2321302..2322489 | - | 1188 | WP_001054207.1 | efflux MFS transporter YdeE | - |
| D9Q99_RS11195 (2322684) | 2322684..2323583 | + | 900 | WP_000087214.1 | O-acetylserine/cysteine exporter | - |
| D9Q99_RS11200 (2323614) | 2323614..2323832 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| D9Q99_RS11205 (2323864) | 2323864..2324247 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| D9Q99_RS11210 (2324267) | 2324267..2324701 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| D9Q99_RS11215 (2324912) | 2324912..2325577 | + | 666 | WP_000885024.1 | NAAT family transporter MarC | - |
| D9Q99_RS11220 (2325602) | 2325602..2326792 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| D9Q99_RS11225 (2326942) | 2326942..2328057 | - | 1116 | WP_000258572.1 | putative protein YneK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|