MGE detailed information
MGE type: Prophage MGE length: 13413 bp
Accession: NZ_CP032513 Location: 1568942..1582354 Organism: Shigella flexneri strain SFL1520 Replicon: chromosome
Accession: NZ_CP032513 Location: 1568942..1582354 Organism: Shigella flexneri strain SFL1520 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D6T62_RS08455 (1565226) | 1565226..1565972 | + | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| D6T62_RS08460 (1566061) | 1566061..1566747 | + | 687 | WP_000215550.1 | DNA-binding transcriptional regulator rspR | - |
| D6T62_RS08465 (1566925) | 1566925..1567128 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| D6T62_RS08470 (1567164) | 1567164..1568632 | - | 1469 | Protein_1614 | mannitol dehydrogenase family protein | - |
| D6T62_RS08475 (1568748) | 1568748..1569445 | + | 698 | WP_252739182.1 | IS1 family transposase IS1X2 | Transposase |
| D6T62_RS08480 (1569497) | 1569497..1570516 | - | 1020 | Protein_1616 | MHS family MFS transporter YdfJ | - |
| D6T62_RS08485 (1570578) | 1570578..1571734 | + | 1157 | WP_094099483.1 | IS3 family transposase ISSd1 | Transposase |
| D6T62_RS08490 (1571731) | 1571731..1572036 | - | 306 | WP_071818640.1 | hypothetical protein | - |
| D6T62_RS08495 (1572061) | 1572061..1572300 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| D6T62_RS08500 (1572300) | 1572300..1572587 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| D6T62_RS08505 (1572659) | 1572659..1572814 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| D6T62_RS08510 (1573032) | 1573032..1573282 | + | 251 | Protein_1622 | hypothetical protein | - |
| D6T62_RS08515 (1573349) | 1573349..1573627 | + | 279 | WP_024258459.1 | hypothetical protein | - |
| D6T62_RS08520 (1573629) | 1573629..1574678 | + | 1050 | WP_001265241.1 | DUF968 domain-containing protein | - |
| D6T62_RS08525 (1574691) | 1574691..1575047 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| D6T62_RS08530 (1575062) | 1575062..1575883 | + | 822 | WP_000762884.1 | antitermination protein | - |
| D6T62_RS08550 (1576825) | 1576825..1576911 | + | 87 | WP_000115835.1 | DUF3927 family protein | - |
| D6T62_RS08555 (1577192) | 1577192..1577527 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| D6T62_RS08560 (1577787) | 1577787..1577972 | + | 186 | Protein_1629 | DUF1737 domain-containing protein | - |
| D6T62_RS23905 (1577972) | 1577972..1578133 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| D6T62_RS08565 (1578283) | 1578283..1578462 | + | 180 | WP_000372593.1 | class II holin family protein | - |
| D6T62_RS24120 (1579707) | 1579707..1580065 | + | 359 | Protein_1633 | type 1 fimbrial protein | - |
| D6T62_RS08585 (1580078) | 1580078..1580443 | + | 366 | Protein_1634 | Protein FimG | VF |
| D6T62_RS08590 (1580518) | 1580518..1580727 | - | 210 | Protein_1635 | IS1 family transposase IS1X2 | Transposase |
| D6T62_RS24405 (1581997) | 1581997..1582548 | - | 552 | Protein_1637 | IS1 family transposase IS1X1 | Transposase |
| D6T62_RS08605 (1582604) | 1582604..1583353 | + | 750 | Protein_1638 | fimbrial protein | - |
| D6T62_RS08610 (1583687) | 1583687..1585966 | + | 2280 | WP_000726665.1 | acid resistance putative oxidoreductase YdeP | - |
| D6T62_RS08615 (1586214) | 1586214..1586411 | + | 198 | WP_000543379.1 | two-component system connector SafA | - |
| D6T62_RS08620 (1586485) | 1586485..1587246 | + | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|