MGE detailed information
MGE type: Prophage MGE length: 54025 bp
Accession: NZ_CP032085 Location: 3830900..3884924 Organism: Escherichia coli strain ATCC 25922 Replicon: chromosome
Accession: NZ_CP032085 Location: 3830900..3884924 Organism: Escherichia coli strain ATCC 25922 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D1792_RS18340 () | 3826024..3826467 | - | 444 | WP_000786398.1 | DNA polymerase III subunit chi | - |
| D1792_RS18345 () | 3826821..3828332 | - | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| D1792_RS18350 () | 3828599..3829699 | + | 1101 | WP_000584109.1 | LPS export ABC transporter permease LptF | - |
| D1792_RS18355 () | 3829699..3830781 | + | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| D1792_RS18360 () | 3830900..3832402 | - | 1503 | WP_001332879.1 | DUF853 domain-containing protein | - |
| D1792_RS18365 () | 3832532..3833551 | - | 1020 | WP_000061768.1 | NADPH-dependent aldehyde reductase Ahr | - |
| D1792_RS18375 () | 3833922..3835832 | + | 1911 | WP_000083138.1 | hypothetical protein ; Integrase | Integrase |
| D1792_RS18380 () | 3835965..3836297 | - | 333 | WP_001261095.1 | NIPSNAP family protein | - |
| D1792_RS18385 () | 3837303..3837769 | - | 467 | Protein_3590 | DUF1643 domain-containing protein | - |
| D1792_RS18390 () | 3837962..3838522 | + | 561 | WP_000190110.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| D1792_RS18395 () | 3838536..3839381 | + | 846 | WP_000331917.1 | hypothetical protein | - |
| D1792_RS18400 () | 3839442..3839936 | - | 495 | WP_000145203.1 | membrane protein | - |
| D1792_RS18405 () | 3840177..3840641 | + | 465 | WP_000749342.1 | helix-turn-helix domain-containing protein | - |
| D1792_RS18410 () | 3841679..3842503 | + | 825 | WP_000594912.1 | hypothetical protein | - |
| D1792_RS18415 () | 3842552..3843124 | - | 573 | WP_000227281.1 | hypothetical protein | - |
| D1792_RS18420 () | 3843225..3843482 | + | 258 | Protein_3597 | IS3 family transposase IS911 | Transposase |
| D1792_RS18425 () | 3843495..3844646 | - | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| D1792_RS18430 () | 3844711..3845615 | + | 905 | Protein_3599 | IS3 family transposase | - |
| D1792_RS18435 () | 3845698..3845955 | + | 258 | WP_000177060.1 | hypothetical protein | - |
| D1792_RS18440 () | 3846513..3847280 | - | 768 | WP_000175457.1 | hypothetical protein | VF |
| D1792_RS18445 () | 3847281..3848237 | - | 957 | WP_000684856.1 | hypothetical protein | VF |
| D1792_RS18450 () | 3848234..3849232 | - | 999 | WP_000125187.1 | hypothetical protein | VF |
| D1792_RS18455 () | 3849229..3850131 | - | 903 | WP_000879148.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| D1792_RS18460 () | 3850176..3852500 | - | 2325 | WP_000188262.1 | Fe(3+) dicitrate transport protein FecA | - |
| D1792_RS18465 () | 3852587..3853540 | - | 954 | WP_001068910.1 | fec operon regulator FecR | - |
| D1792_RS18470 () | 3853537..3854058 | - | 522 | WP_001283626.1 | hypothetical protein | VF |
| D1792_RS18475 () | 3854350..3855047 | + | 698 | Protein_3608 | IS1 family transposase | - |
| D1792_RS18480 () | 3855207..3855338 | - | 132 | Protein_3609 | IS3 family transposase | - |
| D1792_RS18485 () | 3855620..3856978 | + | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| D1792_RS18490 () | 3857217..3858602 | - | 1386 | WP_000998019.1 | IS66 family transposase ISEc8 | Transposase |
| D1792_RS18495 () | 3858652..3858999 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| D1792_RS18500 () | 3858996..3859376 | - | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| D1792_RS18505 () | 3859731..3860165 | - | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| D1792_RS18510 () | 3860153..3860554 | - | 402 | WP_000270962.1 | hypothetical protein | - |
| D1792_RS18515 () | 3860814..3861383 | - | 570 | WP_000221530.1 | inovirus Gp2 family protein | - |
| D1792_RS18520 () | 3862113..3862262 | - | 150 | WP_071526287.1 | hemolysin activation protein | - |
| D1792_RS18525 () | 3863036..3863242 | + | 207 | WP_000211308.1 | helix-turn-helix domain-containing protein | - |
| D1792_RS18530 () | 3863338..3863940 | + | 603 | WP_000813435.1 | hypothetical protein | - |
| D1792_RS18535 () | 3865140..3866057 | + | 918 | WP_000250228.1 | hypothetical protein | - |
| D1792_RS18540 () | 3866142..3867014 | + | 873 | WP_001069743.1 | GTPase family protein | - |
| D1792_RS18545 () | 3867386..3870232 | + | 2847 | WP_001546341.1 | Ag43/Cah family autotransporter adhesin | - |
| D1792_RS18550 () | 3870303..3870461 | + | 159 | WP_001323397.1 | DUF905 family protein | - |
| D1792_RS18555 () | 3870616..3871434 | + | 819 | WP_001234738.1 | DUF945 domain-containing protein | - |
| D1792_RS18560 () | 3871776..3872249 | + | 474 | WP_001350782.1 | antirestriction protein | - |
| D1792_RS18565 () | 3872265..3872741 | + | 477 | WP_001186775.1 | RadC family protein | - |
| D1792_RS18570 () | 3872804..3873025 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| D1792_RS18575 () | 3873188..3873556 | + | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| D1792_RS18580 () | 3873646..3874023 | + | 378 | WP_000854759.1 | TA system toxin CbtA family protein | Toxin Detail |
| D1792_RS18585 () | 3874020..3874508 | + | 489 | WP_000761690.1 | hypothetical protein | - |
| D1792_RS18590 () | 3874525..3874701 | + | 177 | WP_000839286.1 | DUF957 domain-containing protein | - |
| D1792_RS18595 () | 3874801..3874959 | + | 159 | WP_001467148.1 | hypothetical protein | - |
| D1792_RS18600 () | 3875323..3875499 | + | 177 | Protein_3633 | IS3 family transposase ISSen1 | Transposase |
| D1792_RS18605 () | 3876272..3877912 | + | 1641 | WP_001332039.1 | Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase | - |
| D1792_RS18610 () | 3877905..3879095 | + | 1191 | WP_001295727.1 | DNA cytosine methyltransferase | - |
| D1792_RS18615 () | 3879108..3880847 | - | 1740 | WP_000781649.1 | Alw26I/Eco31I/Esp3I family type II restriction endonuclease | - |
| D1792_RS18620 () | 3880957..3882243 | - | 1287 | WP_000504875.1 | McrC family protein | - |
| D1792_RS18625 () | 3882236..3883747 | - | 1512 | Protein_3638 | AAA family ATPase | - |
| D1792_RS18635 () | 3884998..3885564 | - | 567 | Protein_3640 | restriction endonuclease | - |
| D1792_RS18640 () | 3886668..3886922 | - | 255 | WP_000788354.1 | glycosyltransferase | - |
| D1792_RS18645 () | 3887722..3888981 | + | 1260 | WP_000132325.1 | S-methyl-5-thioribose kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|