MGE detailed information
MGE type: Genomic_island MGE length: 12735 bp
Accession: NZ_CP031706 Location: 4160100..4172834 Organism: Escherichia coli strain R1 Replicon: chromosome
Accession: NZ_CP031706 Location: 4160100..4172834 Organism: Escherichia coli strain R1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0T88_RS20010 () | 4156425..4157633 | - | 1209 | WP_063113518.1 | propionate kinase | - |
| D0T88_RS20015 () | 4157659..4158990 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| D0T88_RS20020 () | 4159012..4160001 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| D0T88_RS20025 () | 4160100..4161038 | - | 939 | WP_000104215.1 | transcriptional regulator TdcA | - |
| D0T88_RS20030 () | 4161227..4161571 | + | 345 | WP_000145836.1 | transcriptional activator TdcR | - |
| D0T88_RS20035 () | 4161827..4162366 | + | 540 | WP_000675746.1 | hypothetical protein | - |
| D0T88_RS20040 () | 4162388..4163575 | + | 1188 | WP_161396207.1 | YhaC family protein | - |
| D0T88_RS20045 () | 4163913..4164893 | + | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| D0T88_RS20055 () | 4165658..4166803 | - | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| D0T88_RS20060 () | 4166900..4167790 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| D0T88_RS20065 () | 4167820..4168590 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| D0T88_RS20070 () | 4168606..4169940 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| D0T88_RS20075 () | 4170315..4171886 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| D0T88_RS20080 () | 4172035..4172370 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| D0T88_RS20085 () | 4172370..4172834 | + | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| D0T88_RS20090 () | 4172889..4173698 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| D0T88_RS20095 () | 4173947..4175227 | + | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| D0T88_RS20100 () | 4175250..4175723 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| D0T88_RS20105 () | 4175734..4176513 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| D0T88_RS20110 () | 4176503..4177381 | + | 879 | WP_001298758.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| D0T88_RS20115 () | 4177399..4177833 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|