MGE detailed information
MGE type: Conjugative plasmid MGE length: 59142 bp
Accession: NZ_CP031656 Location: 1..59142 Organism: Escherichia coli strain UK_Dog_Liverpool Replicon: plasmid pCARB35_03
Accession: NZ_CP031656 Location: 1..59142 Organism: Escherichia coli strain UK_Dog_Liverpool Replicon: plasmid pCARB35_03
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DL545_RS26310 () | 46..1077 | + | 1032 | WP_023518831.1 | RepZ | - |
| DL545_RS26330 () | 2146..2655 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| DL545_RS26335 () | 2711..3313 | - | 603 | WP_001703912.1 | hypothetical protein | - |
| DL545_RS26345 () | 3667..5013 | + | 1347 | WP_039052405.1 | hypothetical protein | - |
| DL545_RS27095 () | 5528..5830 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| DL545_RS26360 () | 5827..6453 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| DL545_RS26365 () | 6633..7904 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| DL545_RS26370 () | 7904..8341 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DL545_RS26375 () | 8338..8586 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| DL545_RS26385 () | 9004..9906 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| DL545_RS26390 () | 10001..10336 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| DL545_RS26395 () | 10674..11654 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| DL545_RS26400 () | 11657..12079 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| DL545_RS26405 () | 12083..12393 | + | 311 | Protein_13 | hypothetical protein | - |
| DL545_RS26410 () | 12469..13152 | + | 684 | WP_000086127.1 | DNA methylase | - |
| DL545_RS26415 () | 13153..13374 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| DL545_RS26420 () | 13388..13822 | + | 435 | WP_011264065.1 | DUF1380 family protein | - |
| DL545_RS26425 () | 13867..14637 | + | 771 | WP_011264064.1 | hypothetical protein | - |
| DL545_RS26435 () | 15178..15480 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| DL545_RS26440 () | 15527..15949 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| DL545_RS26445 () | 15946..16137 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| DL545_RS26455 () | 16208..16522 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| DL545_RS26465 () | 16906..16980 | + | 75 | Protein_22 | single-stranded DNA-binding protein | - |
| DL545_RS26470 () | 16981..18270 | + | 1290 | Protein_23 | hypothetical protein | - |
| DL545_RS26475 () | 18323..18757 | + | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| DL545_RS26480 () | 18754..19473 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| DL545_RS26485 () | 19470..20066 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| DL545_RS26495 () | 20528..21028 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| DL545_RS26510 () | 21757..22191 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| DL545_RS26515 () | 22285..22551 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| DL545_RS26520 () | 22728..23117 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| DL545_RS26525 () | 23114..24016 | + | 903 | WP_011264057.1 | Recombination-promoting nuclease RpnA | VF |
| DL545_RS26530 () | 24078..24284 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| DL545_RS26535 () | 24315..24566 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| DL545_RS27280 () | 24600..24797 | - | 198 | WP_001161107.1 | hypothetical protein | - |
| DL545_RS26550 () | 25146..25994 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| DL545_RS26555 () | 26081..26416 | - | 336 | WP_021529212.1 | hypothetical protein | - |
| DL545_RS26560 () | 26650..26982 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| DL545_RS26565 () | 26993..29692 | + | 2700 | WP_011264053.1 | Protein TraI | Relaxase |
| DL545_RS26570 () | 29730..32021 | - | 2292 | WP_011264051.1 | hypothetical protein | - |
| DL545_RS26575 () | 32014..33084 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| DL545_RS26580 () | 33103..34311 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 34491..34548 | - | 58 | NuclAT_1 | - | - |
| - () | 34491..34548 | - | 58 | NuclAT_1 | - | - |
| - () | 34491..34548 | - | 58 | NuclAT_1 | - | - |
| - () | 34491..34548 | - | 58 | NuclAT_1 | - | - |
| DL545_RS26585 () | 34618..35367 | - | 750 | Protein_42 | protein finQ | - |
| DL545_RS26590 () | 35596..35913 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| DL545_RS26595 () | 35910..36443 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| DL545_RS26600 () | 36537..37682 | - | 1146 | WP_039023136.1 | Beta-lactamase | ARG |
| DL545_RS26605 () | 38135..38832 | - | 698 | Protein_46 | IS1 family transposase | - |
| DL545_RS26615 () | 38883..39188 | + | 306 | Protein_47 | hypothetical protein | VF |
| DL545_RS26620 () | 39201..40286 | + | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| DL545_RS26625 () | 40303..40917 | + | 615 | WP_000908227.1 | hypothetical protein | VF |
| DL545_RS26630 () | 40927..41487 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| DL545_RS26635 () | 41472..42128 | + | 657 | WP_001401940.1 | hypothetical protein | VF |
| DL545_RS26640 () | 42116..43552 | + | 1437 | WP_205417102.1 | hypothetical protein | VF |
| DL545_RS27285 () | 43549..43746 | - | 198 | WP_032159596.1 | hypothetical protein | - |
| DL545_RS26675 () | 45186..46340 | + | 1155 | WP_001139955.1 | integrase | - |
| DL545_RS26680 () | 46491..47315 | + | 825 | WP_023518851.1 | hypothetical protein | - |
| DL545_RS26685 () | 47401..48603 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| DL545_RS26690 () | 48663..49247 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| DL545_RS27100 () | 49642..49758 | + | 117 | Protein_58 | IncI1-type conjugal transfer lipoprotein TraH | - |
| DL545_RS26695 () | 49757..51511 | + | 1755 | Protein_59 | DotA/TraY family protein | - |
| DL545_RS26700 () | 51582..52244 | + | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| DL545_RS26705 () | 52316..52525 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| DL545_RS27105 () | 52917..53093 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| DL545_RS26710 () | 53158..53454 | - | 297 | WP_011264046.1 | hypothetical protein | - |
| DL545_RS26715 () | 53754..54005 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| DL545_RS26720 () | 54077..54229 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - () | 54281..54341 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 54281..54341 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 54281..54341 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 54281..54341 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| DL545_RS26725 () | 54544..54891 | + | 348 | Protein_66 | protein finQ | - |
| DL545_RS26730 () | 55077..56234 | + | 1158 | Protein_67 | IS1380 family transposase ISEcp1 | Transposase |
| DL545_RS26740 () | 56290..56987 | + | 698 | Protein_68 | IS1 family transposase | - |
| DL545_RS26745 () | 57001..57306 | - | 306 | Protein_69 | transcription termination factor NusG | - |
| DL545_RS26755 () | 57748..58035 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| DL545_RS26760 () | 57953..58216 | - | 264 | WP_032180564.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|