MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 37724 bp
Accession: NZ_CP031379 Location: 1077434..1115157 Organism: Streptococcus suis strain ISU2660 Replicon: chromosome
Accession: NZ_CP031379 Location: 1077434..1115157 Organism: Streptococcus suis strain ISU2660 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK878_RS05390 () | 1072971..1073834 | - | 864 | WP_053866140.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| DK878_RS05395 () | 1074265..1075736 | + | 1472 | Protein_1018 | IS1182 family transposase | - |
| DK878_RS05400 () | 1075808..1076098 | - | 291 | WP_053866136.1 | hypothetical protein | - |
| DK878_RS05405 () | 1076100..1076411 | - | 312 | WP_053866137.1 | hypothetical protein | - |
| DK878_RS05410 () | 1076482..1077441 | - | 960 | Protein_1021 | helicase | - |
| DK878_RS05415 () | 1077434..1079290 | - | 1857 | WP_001820670.1 | IS607 family transposase ISNma20 | Transposase |
| DK878_RS05420 () | 1079345..1079536 | - | 192 | WP_001820669.1 | hypothetical protein | - |
| DK878_RS05425 () | 1079608..1079838 | - | 231 | WP_001206986.1 | hypothetical protein | - |
| DK878_RS05430 () | 1079884..1080738 | - | 855 | WP_053866138.1 | ParB/RepB/Spo0J family partition protein | - |
| DK878_RS05435 () | 1080747..1081712 | - | 966 | WP_053866141.1 | plasmid recombination protein | - |
| DK878_RS05440 () | 1082237..1083262 | - | 1026 | WP_001170964.1 | AAA family ATPase | - |
| DK878_RS05445 () | 1083433..1083891 | - | 459 | Protein_1028 | sigma-70 family RNA polymerase sigma factor | - |
| DK878_RS05450 () | 1083975..1084400 | - | 426 | WP_000323895.1 | sigma-70 family RNA polymerase sigma factor | - |
| DK878_RS05455 () | 1084495..1085007 | - | 513 | WP_000241709.1 | sigma-70 family RNA polymerase sigma factor | - |
| DK878_RS05460 () | 1085495..1085668 | - | 174 | WP_002779755.1 | cysteine-rich KTR domain-containing protein | - |
| DK878_RS05465 () | 1085720..1087639 | - | 1920 | WP_014636291.1 | Tetracycline resistance protein TetO | VF |
| DK878_RS05470 () | 1088006..1088380 | - | 375 | WP_001129922.1 | TnpV protein | - |
| DK878_RS05475 () | 1088361..1094309 | - | 5949 | WP_053866139.1 | N-6 DNA methylase | - |
| DK878_RS05480 () | 1094359..1094910 | - | 552 | WP_024395801.1 | hypothetical protein | - |
| DK878_RS05485 () | 1094894..1095085 | - | 192 | WP_001068450.1 | thrombospondin type 3 repeat-containing protein | - |
| DK878_RS05490 () | 1095086..1099981 | - | 4896 | WP_180821229.1 | Agglutinin receptor | VF |
| DK878_RS05495 () | 1100151..1100741 | + | 591 | WP_000037237.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| DK878_RS05500 () | 1100738..1101583 | + | 846 | WP_001030299.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| DK878_RS05505 () | 1101646..1104447 | - | 2802 | WP_053866153.1 | CHAP domain-containing protein | - |
| DK878_RS05510 () | 1104449..1106800 | - | 2352 | WP_053866154.1 | AAA family ATPase | - |
| DK878_RS05515 () | 1106757..1107110 | - | 354 | WP_002935113.1 | PrgI family protein | - |
| DK878_RS05520 () | 1107172..1108026 | - | 855 | WP_014636634.1 | conjugal transfer protein TrbL | - |
| DK878_RS05525 () | 1108045..1108287 | - | 243 | WP_001072171.1 | hypothetical protein | - |
| DK878_RS05530 () | 1108305..1108925 | - | 621 | WP_173556633.1 | TraM recognition domain-containing protein | - |
| DK878_RS05535 () | 1108948..1110858 | - | 1911 | WP_180821230.1 | group II intron reverse transcriptase/maturase | - |
| DK878_RS05540 () | 1111667..1112941 | - | 1275 | Protein_1047 | type IV secretory system conjugative DNA transfer family protein | - |
| DK878_RS05545 () | 1112941..1113429 | - | 489 | WP_053866092.1 | hypothetical protein | - |
| DK878_RS05550 () | 1113506..1114090 | - | 585 | WP_053866093.1 | CPBP family intramembrane metalloprotease | - |
| DK878_RS05555 () | 1114093..1114326 | - | 234 | WP_001005710.1 | hypothetical protein | - |
| DK878_RS05560 () | 1114335..1114718 | - | 384 | WP_000895326.1 | hypothetical protein | - |
| DK878_RS05565 () | 1114729..1115157 | - | 429 | WP_001050385.1 | hypothetical protein | - |
| DK878_RS05570 () | 1115141..1116496 | - | 1356 | WP_053866094.1 | DNA (cytosine-5-)-methyltransferase | - |
| DK878_RS05575 () | 1116648..1117463 | - | 816 | WP_024408847.1 | replication initiator protein A | - |
| DK878_RS05580 () | 1117466..1117633 | - | 168 | WP_032497901.1 | hypothetical protein | - |
| DK878_RS05585 () | 1117833..1118198 | - | 366 | WP_002936483.1 | 50S ribosomal protein L7/L12 | - |
| DK878_RS05590 () | 1118264..1118758 | - | 495 | WP_002936486.1 | 50S ribosomal protein L10 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|