MGE detailed information
MGE type: Prophage MGE length: 82194 bp
Accession: NZ_CP031345 Location: 2419584..2501777 Organism: Escherichia coli O145 strain RM12367-C1 Replicon: chromosome
Accession: NZ_CP031345 Location: 2419584..2501777 Organism: Escherichia coli O145 strain RM12367-C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE53_RS12635 () | 2415024..2416397 | + | 1374 | WP_001400641.1 | MFS transporter | - |
| DXE53_RS12640 () | 2416443..2417324 | - | 882 | WP_000984517.1 | protease HtpX | - |
| DXE53_RS12645 () | 2417516..2419564 | - | 2049 | WP_001055791.1 | carboxy terminal-processing peptidase | - |
| DXE53_RS12650 () | 2419584..2420282 | - | 699 | WP_000431368.1 | RNA chaperone ProQ | - |
| DXE53_RS12655 () | 2420379..2420876 | - | 498 | WP_001043887.1 | L-methionine (R)-S-oxide reductase | - |
| DXE53_RS12660 () | 2421006..2422289 | + | 1284 | WP_001400643.1 | membrane integrity lipid transport subunit YebS | - |
| DXE53_RS12665 () | 2422258..2424891 | + | 2634 | WP_001297532.1 | hypothetical protein | VF |
| DXE53_RS12670 () | 2424971..2426410 | + | 1440 | WP_024221588.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| DXE53_RS12675 () | 2426528..2426764 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| DXE53_RS12680 () | 2426869..2427060 | + | 192 | WP_001313035.1 | YebW family protein | - |
| DXE53_RS12685 () | 2427061..2427717 | - | 657 | WP_000812714.1 | protein-serine/threonine phosphatase | - |
| - () | 2427814..2428082 | + | 269 | - | - | Antitoxin Detail |
| - () | 2427852..2427955 | - | 104 | - | - | Toxin Detail |
| DXE53_RS12690 () | 2428112..2428453 | - | 342 | WP_000976475.1 | YebY family protein | - |
| DXE53_RS12695 () | 2428466..2429338 | - | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| DXE53_RS12700 () | 2429342..2429716 | - | 375 | WP_000168738.1 | CopC domain-containing protein YobA | - |
| DXE53_RS12705 () | 2429855..2430085 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| DXE53_RS12710 () | 2430187..2430843 | + | 657 | WP_000011656.1 | carbon-nitrogen hydrolase family protein | - |
| DXE53_RS12715 () | 2430867..2431529 | + | 663 | WP_000944252.1 | exodeoxyribonuclease X | - |
| DXE53_RS12720 () | 2431526..2433585 | - | 2060 | Protein_2405 | oligopeptidase B | - |
| DXE53_RS12725 () | 2433794..2434453 | - | 660 | WP_000024746.1 | tellurite resistance TerB family protein | - |
| DXE53_RS12730 () | 2434780..2435136 | - | 357 | WP_001295500.1 | protein YebF | - |
| DXE53_RS12735 () | 2435203..2435493 | - | 291 | WP_032315773.1 | DNA damage-inducible protein YebG | - |
| DXE53_RS12740 () | 2435627..2436805 | + | 1179 | WP_000173474.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| DXE53_RS12745 () | 2436861..2437502 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| DXE53_RS12750 () | 2437539..2439350 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| DXE53_RS12755 () | 2439585..2441060 | - | 1476 | WP_000301720.1 | glucose-6-phosphate dehydrogenase | - |
| DXE53_RS12760 () | 2441398..2442267 | + | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| DXE53_RS12765 () | 2442395..2443837 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| DXE53_RS12770 () | 2443968..2444939 | - | 972 | WP_000448381.1 | 3-hydroxyadipyl-CoA dehydrogenase | VF |
| DXE53_RS12775 () | 2445059..2446381 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| DXE53_RS12780 () | 2446397..2447329 | - | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| DXE53_RS12785 () | 2447408..2448163 | + | 756 | WP_000202996.1 | 1,2-phenylacetyl-CoA epoxidase, subunit E | VF |
| DXE53_RS12790 () | 2448160..2448945 | + | 786 | WP_000571478.1 | Putative 1,2-phenylacetyl-CoA epoxidase, subunit D | VF |
| DXE53_RS12795 () | 2449191..2450201 | - | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| DXE53_RS12800 () | 2450210..2450821 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| DXE53_RS12805 () | 2450960..2451025 | - | 66 | WP_072095795.1 | stress response small protein YobI | - |
| DXE53_RS12810 () | 2451096..2451698 | + | 603 | WP_001024929.1 | YebB family permuted papain-like enzyme | - |
| DXE53_RS12815 () | 2451700..2452221 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| DXE53_RS12820 () | 2452256..2452996 | - | 741 | WP_000907248.1 | L-serine dehydratase 1 | VF |
| DXE53_RS12825 () | 2453025..2453477 | - | 453 | WP_032161923.1 | dihydroneopterin triphosphate diphosphatase | - |
| DXE53_RS12830 () | 2453595..2455367 | - | 1773 | WP_001258668.1 | aspartate--tRNA ligase | - |
| DXE53_RS12835 () | 2455677..2456243 | + | 567 | WP_000891626.1 | hydrolase | - |
| DXE53_RS12840 () | 2456550..2456798 | + | 249 | WP_001261935.1 | DinI-like family protein | - |
| DXE53_RS12845 () | 2457169..2458182 | - | 1014 | WP_122993102.1 | Hydrogen cyanide synthase subunit HcnA | VF |
| DXE53_RS12850 () | 2458397..2458474 | - | 78 | WP_122988840.1 | hypothetical protein | - |
| DXE53_RS12855 () | 2458585..2458854 | - | 270 | WP_001023400.1 | phage tail fiber C-terminal domain-containing protein | - |
| DXE53_RS12860 () | 2458856..2460178 | - | 1323 | WP_106873508.1 | ISNCY family transposase KIS | Transposase |
| DXE53_RS12865 () | 2460244..2460867 | - | 624 | WP_001449501.1 | putative D-xylose utilization operon transcriptional repressor | VF |
| DXE53_RS12870 () | 2460936..2464412 | - | 3477 | WP_188323034.1 | host specificity protein J | - |
| DXE53_RS12875 () | 2464653..2465285 | - | 633 | WP_122994876.1 | tail assembly protein | - |
| DXE53_RS12880 () | 2465231..2465974 | - | 744 | WP_001457012.1 | C40 family peptidase | - |
| DXE53_RS12885 () | 2465985..2466683 | - | 699 | WP_001499019.1 | phage minor tail protein L | - |
| DXE53_RS12890 () | 2466683..2467012 | - | 330 | WP_000847280.1 | phage tail protein | - |
| DXE53_RS12895 () | 2467009..2469654 | - | 2646 | WP_119651825.1 | phage tail tape measure protein | - |
| DXE53_RS12900 () | 2469698..2470006 | - | 309 | WP_000532075.1 | phage tail assembly protein T | - |
| DXE53_RS12905 () | 2470033..2470455 | - | 423 | WP_000479054.1 | phage minor tail protein G | - |
| DXE53_RS12910 () | 2470472..2471221 | - | 750 | WP_000174599.1 | phage tail protein | - |
| DXE53_RS12915 () | 2471229..2471627 | - | 399 | WP_119651826.1 | phage tail protein | - |
| DXE53_RS12920 () | 2471637..2472263 | - | 627 | WP_000974964.1 | phage tail protein | - |
| DXE53_RS12925 () | 2472266..2472547 | - | 282 | WP_001281345.1 | DNA breaking-rejoining protein | - |
| DXE53_RS12930 () | 2472540..2472866 | - | 327 | WP_001097058.1 | DUF2190 family protein | - |
| DXE53_RS12935 () | 2472954..2474978 | - | 2025 | WP_162908517.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| DXE53_RS12940 () | 2474923..2476425 | - | 1503 | WP_000974564.1 | phage portal protein | - |
| DXE53_RS12945 () | 2476425..2476637 | - | 213 | WP_000102415.1 | hypothetical protein | - |
| DXE53_RS12950 () | 2476634..2478757 | - | 2124 | WP_087634876.1 | phage terminase large subunit family protein | - |
| DXE53_RS12955 () | 2478754..2479230 | - | 477 | WP_000348565.1 | DUF1441 family protein | - |
| DXE53_RS12960 () | 2479746..2479931 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| DXE53_RS12965 () | 2480450..2480983 | - | 534 | WP_001092874.1 | lysozyme | - |
| DXE53_RS12970 () | 2481495..2481980 | - | 486 | WP_001457151.1 | hypothetical protein | - |
| DXE53_RS12975 () | 2481984..2482199 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| DXE53_RS12980 () | 2482277..2482522 | - | 246 | WP_001447570.1 | DUF826 domain-containing protein | - |
| DXE53_RS12985 () | 2482563..2482742 | - | 180 | WP_000143463.1 | DUF1378 family protein | - |
| DXE53_RS12990 () | 2482879..2484825 | - | 1947 | WP_119651827.1 | DUF1737 domain-containing protein | - |
| DXE53_RS12995 () | 2485337..2485606 | - | 270 | WP_047083032.1 | hypothetical protein | VF |
| DXE53_RS13000 () | 2485618..2486577 | - | 960 | WP_096848402.1 | hypothetical protein | VF |
| DXE53_RS13020 () | 2486960..2488018 | - | 1059 | WP_000024314.1 | site-specific DNA-methyltransferase | - |
| DXE53_RS13025 () | 2488169..2488366 | - | 198 | WP_000917756.1 | hypothetical protein | - |
| DXE53_RS13030 () | 2488582..2488962 | - | 381 | WP_001204809.1 | antitermination protein Q | - |
| DXE53_RS13035 () | 2488981..2489970 | - | 990 | WP_001202275.1 | DUF968 domain-containing protein | - |
| DXE53_RS13040 () | 2490023..2490280 | - | 258 | WP_001065352.1 | hypothetical protein | - |
| DXE53_RS13045 () | 2490277..2491677 | - | 1401 | WP_000184326.1 | replicative DNA helicase | - |
| DXE53_RS13050 () | 2491674..2492564 | - | 891 | WP_000606871.1 | ATP-binding protein | - |
| DXE53_RS13055 () | 2492584..2493477 | - | 894 | WP_001247836.1 | hypothetical protein | - |
| DXE53_RS13060 () | 2493464..2493697 | - | 234 | WP_000621231.1 | hypothetical protein | - |
| DXE53_RS13065 () | 2493694..2494353 | - | 660 | WP_137570701.1 | ash family protein | - |
| DXE53_RS13070 () | 2494331..2494510 | - | 180 | WP_042909567.1 | DUF4222 domain-containing protein | - |
| DXE53_RS13075 () | 2494530..2495237 | - | 708 | WP_001090266.1 | Rha family transcriptional regulator | - |
| DXE53_RS13080 () | 2495319..2495552 | - | 234 | WP_000944728.1 | helix-turn-helix domain-containing protein | - |
| DXE53_RS13085 () | 2495709..2496398 | + | 690 | WP_119651828.1 | LexA family transcriptional regulator | - |
| DXE53_RS13090 () | 2496546..2497238 | + | 693 | WP_000387835.1 | helix-turn-helix domain-containing protein | - |
| DXE53_RS13095 () | 2497244..2497444 | + | 201 | WP_000147367.1 | hypothetical protein | - |
| DXE53_RS13100 () | 2497642..2497824 | + | 183 | WP_000553979.1 | hypothetical protein | - |
| DXE53_RS13105 () | 2497830..2498402 | + | 573 | WP_001365075.1 | hypothetical protein | - |
| DXE53_RS13110 () | 2498772..2499599 | + | 828 | WP_000720014.1 | hypothetical protein | - |
| DXE53_RS13115 () | 2499640..2500011 | + | 372 | WP_001447615.1 | DUF5406 family protein | - |
| DXE53_RS13120 () | 2500043..2500147 | + | 105 | Protein_2482 | DUF4222 domain-containing protein | - |
| DXE53_RS13125 () | 2500203..2500457 | + | 255 | WP_001193437.1 | excisionase family protein | - |
| DXE53_RS13130 () | 2500491..2501777 | + | 1287 | WP_000063650.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DXE53_RS13135 () | 2501782..2502558 | + | 777 | WP_069190626.1 | DUF72 domain-containing protein | - |
| DXE53_RS13140 () | 2502611..2503006 | + | 396 | WP_000252980.1 | MAPEG family protein | - |
| DXE53_RS13145 () | 2503047..2503790 | + | 744 | WP_000019617.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| DXE53_RS13150 () | 2503787..2504758 | + | 972 | WP_000564736.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|