NZ_CP0311132288327..2450970

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 162644 bp
Accession: NZ_CP031113        Location: 2288327..2450970         Organism: Bordetella pertussis strain UK39       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DVA63_RS10895 (DVA63_10985) 2283524..2285425 + 1902 WP_010930517.1 TRAP transporter large permease subunit -
DVA63_RS10900 (DVA63_10990) 2285474..2286268 + 795 WP_010930516.1 enoyl-CoA hydratase/isomerase family protein -
DVA63_RS10905 (DVA63_10995) 2286281..2287282 - 1002 WP_010930515.1 LD-carboxypeptidase -
DVA63_RS10910 (DVA63_11000) 2287279..2287785 - 507 WP_004568494.1 tRNA adenosine(34) deaminase TadA -
DVA63_RS10915 (DVA63_11005) 2287778..2288626 - 849 WP_010930513.1 HAD family hydrolase -
DVA63_RS10920 (DVA63_11010) 2288724..2289266 - 543 WP_019247780.1 hypothetical protein -
DVA63_RS10925 (DVA63_11015) 2289310..2290260 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
DVA63_RS10930 (DVA63_11020) 2290415..2290741 - 327 WP_010930511.1 monovalent cation/H(+) antiporter subunit G -
DVA63_RS10935 (DVA63_11025) 2290738..2291022 - 285 WP_003810975.1 K+/H+ antiporter subunit F -
DVA63_RS10940 (DVA63_11030) 2291019..2291498 - 480 WP_010930510.1 Na+/H+ antiporter subunit E -
DVA63_RS10945 (DVA63_11035) 2291495..2293123 - 1629 WP_004568496.1 monovalent cation/H+ antiporter subunit D -
DVA63_RS10950 (DVA63_11040) 2293120..2293464 - 345 WP_003810969.1 Na+/H+ antiporter subunit C -
DVA63_RS10955 (DVA63_11045) 2293464..2296397 - 2934 WP_010930509.1 monovalent cation/H+ antiporter subunit A -
DVA63_RS10960 (DVA63_11050) 2296819..2297556 + 738 Protein_2166 tripartite tricarboxylate transporter substrate-binding protein -
DVA63_RS10965 (DVA63_11055) 2297556..2298506 - 951 WP_010930208.1 IS481 family transposase IS481v2 Transposase
DVA63_RS10970 (DVA63_11060) 2298605..2298901 - 297 WP_003811452.1 hypothetical protein -
DVA63_RS10975 (DVA63_11065) 2299023..2299925 + 903 WP_023995058.1 HTH-type transcriptional regulator CynR VF
DVA63_RS10980 (DVA63_11070) 2299930..2300643 - 714 WP_010930507.1 Sulfoquinovose 1-dehydrogenase VF
DVA63_RS10985 (DVA63_11075) 2300657..2301628 - 972 WP_010930506.1 tripartite tricarboxylate transporter substrate binding protein -
DVA63_RS10990 (DVA63_11080) 2301753..2303081 - 1329 Protein_2172 amidohydrolase family protein -
DVA63_RS10995 (DVA63_11085) 2303348..2303728 + 381 WP_019249653.1 helix-turn-helix domain-containing protein -
DVA63_RS11000 (DVA63_11090) 2303732..2304919 + 1188 WP_010930504.1 MFS transporter -
DVA63_RS11005 (DVA63_11095) 2304943..2305365 + 423 Protein_2175 arsenate reductase (glutaredoxin) -
DVA63_RS11010 (DVA63_11100) 2305358..2306080 + 723 WP_010930503.1 arsenical resistance protein ArsH -
DVA63_RS11015 (DVA63_11105) 2306077..2306265 - 189 WP_033455115.1 hypothetical protein -
DVA63_RS11020 (DVA63_11110) 2306373..2307323 + 951 WP_005013747.1 IS481 family transposase IS481 Transposase
DVA63_RS11025 (DVA63_11115) 2307320..2307748 - 429 WP_019249376.1 hypothetical protein -
DVA63_RS11030 (DVA63_11120) 2307745..2309135 - 1391 Protein_2180 Arylsulfatase VF
DVA63_RS11035 (DVA63_11125) 2309150..2310112 - 963 WP_003811538.1 tripartite tricarboxylate transporter substrate binding protein -
DVA63_RS11040 (DVA63_11130) 2310228..2311181 + 954 WP_010930502.1 LysR family transcriptional regulator -
DVA63_RS11045 (DVA63_11135) 2311191..2312183 - 993 WP_010930501.1 tripartite tricarboxylate transporter substrate binding protein -
DVA63_RS11050 (DVA63_11140) 2312235..2312966 - 732 WP_230457143.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
DVA63_RS11055 (DVA63_11145) 2313055..2313735 - 681 WP_019248752.1 SDR family oxidoreductase -
DVA63_RS11060 (DVA63_11150) 2313810..2314916 + 1107 WP_023995519.1 fumarylacetoacetate hydrolase family protein -
DVA63_RS11065 (DVA63_11155) 2314947..2316143 + 1197 WP_010930497.1 alpha-hydroxy acid oxidase -
DVA63_RS11070 (DVA63_11160) 2316140..2316913 + 774 WP_010930496.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
DVA63_RS11075 (DVA63_11165) 2316930..2317952 + 1023 WP_023852774.1 tripartite tricarboxylate transporter substrate binding protein -
DVA63_RS11080 (DVA63_11170) 2318038..2318982 + 945 WP_010930494.1 LysR family transcriptional regulator -
DVA63_RS11085 (DVA63_11175) 2318960..2319829 - 870 WP_010930493.1 TauD/TfdA family dioxygenase -
DVA63_RS11090 (DVA63_11180) 2320073..2320696 + 624 WP_010930492.1 glutathione S-transferase N-terminal domain-containing protein -
DVA63_RS11095 (DVA63_11185) 2320829..2321008 + 180 WP_225975616.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
DVA63_RS11100 (DVA63_11190) 2321011..2321310 + 300 WP_019247905.1 NadS family protein Antitoxin Detail
DVA63_RS11105 (DVA63_11195) 2321324..2324398 - 3075 WP_023995112.1 autotransporter SphB2 -
DVA63_RS11110 (DVA63_11200) 2324528..2325202 + 675 WP_010930489.1 putative transcriptional regulatory protein NarL VF
DVA63_RS11115 (DVA63_11205) 2325195..2327009 + 1815 WP_019247865.1 7TM diverse intracellular signaling domain-containing protein -
DVA63_RS11120 (DVA63_11210) 2327063..2328010 - 948 WP_010930487.1 hypothetical protein -
DVA63_RS11125 (DVA63_11215) 2328114..2329064 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
DVA63_RS11130 (DVA63_11220) 2329080..2329538 - 459 Protein_2200 spermidine synthase -
DVA63_RS11135 (DVA63_11225) 2329617..2331242 - 1626 WP_023852967.1 Arylsulfatase VF
DVA63_RS11140 (DVA63_11230) 2331292..2332326 - 1035 WP_010930475.1 HAD family hydrolase -
DVA63_RS11145 (DVA63_11235) 2332329..2333675 - 1347 WP_010930476.1 BatD family protein -
DVA63_RS11150 (DVA63_11240) 2333672..2335186 - 1515 WP_010930477.1 VWA domain-containing protein -
DVA63_RS11155 (DVA63_11245) 2335177..2336187 - 1011 WP_010930478.1 VWA domain-containing protein -
DVA63_RS11160 (DVA63_11250) 2336174..2336664 - 491 Protein_2206 DUF4381 domain-containing protein -
DVA63_RS11165 (DVA63_11255) 2336661..2337602 - 942 WP_010930479.1 DUF58 domain-containing protein -
DVA63_RS11170 (DVA63_11260) 2337611..2338579 - 969 WP_010930480.1 AAA family ATPase -
DVA63_RS11175 (DVA63_11265) 2338635..2339775 - 1141 Protein_2209 formylglycine-generating enzyme family protein -
DVA63_RS11180 (DVA63_11270) 2340119..2341087 + 969 WP_010930481.1 transporter -
DVA63_RS11185 (DVA63_11275) 2341265..2342254 + 990 WP_010930482.1 tripartite tricarboxylate transporter substrate binding protein -
DVA63_RS11190 (DVA63_11280) 2342301..2343059 + 759 WP_010926609.1 Dihydroanticapsin 7-dehydrogenase VF
DVA63_RS11195 (DVA63_11285) 2343249..2343986 + 738 WP_010930483.1 TerC family protein -
DVA63_RS11200 (DVA63_11290) 2344085..2345035 + 951 WP_005012808.1 IS481 family transposase IS481v2 Transposase
DVA63_RS11210 (DVA63_11300) 2345220..2346002 + 783 WP_003816696.1 ABC transporter ATP-binding protein -
DVA63_RS11215 (DVA63_11305) 2345996..2346697 + 702 WP_003810743.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF VF
DVA63_RS11220 (DVA63_11310) 2346937..2347539 + 603 WP_003810741.1 TetR/AcrR family transcriptional regulator -
DVA63_RS11225 (DVA63_11315) 2347515..2348429 - 915 WP_010930484.1 FAD-dependent oxidoreductase -
DVA63_RS11230 (DVA63_11320) 2348866..2349816 + 951 WP_005013747.1 IS481 family transposase IS481 Transposase
DVA63_RS11235 (DVA63_11325) 2349813..2351369 - 1557 WP_014486074.1 hypothetical protein VF
DVA63_RS11240 (DVA63_11330) 2351362..2352135 - 774 WP_010930486.1 putative oxidoreductase VF
DVA63_RS11245 (DVA63_11335) 2352194..2353144 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
DVA63_RS11250 (DVA63_11340) 2353225..2354400 - 1176 WP_023852812.1 hypothetical protein VF
DVA63_RS11255 (DVA63_11345) 2354414..2356471 - 2058 WP_010930473.1 hypothetical protein VF
DVA63_RS11260 (DVA63_11350) 2356468..2357493 - 1026 WP_010930472.1 UDP-N-acetylglucosamine 4-epimerase VF
DVA63_RS11265 (DVA63_11355) 2357505..2358794 - 1290 WP_010930471.1 UDP-N-acetyl-D-glucosamine 6-dehydrogenase VF
DVA63_RS11270 (DVA63_11360) 2358817..2359914 - 1098 WP_010930470.1 hypothetical protein VF
DVA63_RS11275 (DVA63_11365) 2359911..2360801 - 891 WP_003811224.1 capsular polysaccharide biosynthesis protein -
DVA63_RS11280 (DVA63_11370) 2360798..2362882 - 2085 WP_010930469.1 Putative glycosyltransferase EpsF VF
DVA63_RS11285 (DVA63_11375) 2362914..2364083 - 1170 WP_010930468.1 capsule polysaccharide transporter -
DVA63_RS11290 (DVA63_11380) 2364125..2364865 - 741 WP_014486073.1 Polysialic acid transport ATP-binding protein KpsT VF
DVA63_RS11295 (DVA63_11385) 2364865..2365635 - 771 WP_010930466.1 Polysialic acid transport protein KpsM VF
DVA63_RS20100 2365697..2365828 - 132 WP_262342044.1 hypothetical protein -
DVA63_RS11300 2365960..2366127 + 168 WP_019247171.1 hypothetical protein -
DVA63_RS11305 (DVA63_11390) 2366395..2367276 + 882 WP_023995078.1 Putative glycosyltransferase EpsH VF
DVA63_RS11310 (DVA63_11395) 2367303..2369387 + 2085 WP_010930464.1 hypothetical protein -
DVA63_RS11315 (DVA63_11400) 2369525..2371510 + 1986 WP_010930463.1 hypothetical protein VF
DVA63_RS11320 (DVA63_11410) 2371834..2372334 - 501 WP_003811209.1 DNA protection during starvation protein 2 VF
DVA63_RS11325 (DVA63_11415) 2372433..2373959 - 1527 WP_010930461.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase -
DVA63_RS11330 (DVA63_11420) 2374097..2374984 + 888 WP_010930460.1 HTH-type transcriptional regulator DmlR VF
DVA63_RS11335 (DVA63_11425) 2374999..2375952 - 954 WP_003811203.1 Hydrogen peroxide-inducible genes activator VF
DVA63_RS11340 (DVA63_11430) 2376004..2378094 - 2091 WP_033446218.1 ATP-dependent DNA helicase RecG -
DVA63_RS11345 (DVA63_11435) 2378110..2378496 - 387 WP_010930458.1 Rid family detoxifying hydrolase -
DVA63_RS11350 (DVA63_11440) 2378673..2381026 - 2354 Protein_2244 Pertactin autotransporter VF
DVA63_RS11355 (DVA63_11445) 2381190..2381993 - 804 WP_010930457.1 2,5-didehydrogluconate reductase DkgB -
DVA63_RS11360 (DVA63_11450) 2382065..2383185 - 1121 Protein_2246 MFS transporter -
DVA63_RS11365 (DVA63_11455) 2383287..2384189 + 903 WP_010930456.1 HTH-type transcriptional regulator DmlR VF
DVA63_RS11370 (DVA63_11460) 2384254..2385030 - 777 WP_003811187.1 ferredoxin--NADP reductase -
DVA63_RS11375 (DVA63_11465) 2385352..2386401 + 1050 WP_010930455.1 Fe(3+) ABC transporter substrate-binding protein -
DVA63_RS11380 (DVA63_11470) 2386525..2388195 + 1671 WP_010930454.1 iron ABC transporter permease -
DVA63_RS11385 (DVA63_11475) 2388200..2388994 + 795 WP_019248220.1 Sulfate/thiosulfate import ATP-binding protein CysA VF
DVA63_RS11390 (DVA63_11480) 2389093..2390043 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
DVA63_RS11395 (DVA63_11485) 2390063..2390968 - 906 WP_010930453.1 pirin family protein -
DVA63_RS11400 (DVA63_11490) 2391046..2391744 - 699 WP_003811176.1 pirin family protein -
DVA63_RS11405 (DVA63_11495) 2391904..2392848 + 945 WP_010930452.1 HTH-type transcriptional regulator YhaJ VF
DVA63_RS11410 (DVA63_11500) 2392858..2394345 - 1488 WP_010930451.1 DNA-binding transcriptional regulator NtrC VF
DVA63_RS11415 (DVA63_11505) 2394345..2395412 - 1068 WP_003811167.1 nitrogen regulation protein NR(II) -
DVA63_RS11420 (DVA63_11510) 2395476..2396888 - 1413 WP_003811164.1 type I glutamate--ammonia ligase -
DVA63_RS11425 (DVA63_11515) 2397074..2398294 - 1221 WP_010930450.1 Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR VF
DVA63_RS11430 (DVA63_11520) 2398316..2399266 - 951 WP_005012808.1 IS481 family transposase IS481v2 Transposase
DVA63_RS11435 (DVA63_11525) 2399365..2400006 - 642 WP_010930449.1 dITP/XTP pyrophosphatase VF
DVA63_RS11440 (DVA63_11530) 2400133..2401935 + 1803 WP_010930448.1 EAL domain-containing protein -
DVA63_RS11445 (DVA63_11535) 2402074..2403504 - 1431 Protein_2263 Methyl-accepting chemotaxis protein I VF
DVA63_RS11450 (DVA63_11540) 2403587..2404492 - 906 WP_003811152.1 LysR family transcriptional regulator -
DVA63_RS11455 (DVA63_11545) 2404674..2406050 + 1377 WP_010930446.1 MmgE/PrpD family protein -
DVA63_RS11460 (DVA63_11550) 2406217..2406957 - 741 WP_003811149.1 ribonuclease PH -
DVA63_RS11465 (DVA63_11555) 2407094..2408020 + 927 WP_003811148.1 YicC/YloC family endoribonuclease -
DVA63_RS11470 (DVA63_11560) 2408293..2408448 + 156 WP_010930445.1 hypothetical protein -
DVA63_RS20105 (DVA63_11565) 2408461..2408589 + 129 WP_010928840.1 hypothetical protein -
DVA63_RS11475 (DVA63_11570) 2408586..2408870 + 285 WP_010926696.1 helix-turn-helix domain-containing protein -
DVA63_RS11480 (DVA63_11575) 2408929..2410419 - 1491 WP_003811138.1 AMP nucleosidase -
DVA63_RS11485 (DVA63_11580) 2410664..2411263 + 600 WP_003811137.1 Murein DD-endopeptidase MepH VF
DVA63_RS11490 (DVA63_11585) 2411268..2412038 - 771 WP_003811135.1 3-beta-hydroxycholanate 3-dehydrogenase (NADP(+)) VF
DVA63_RS11495 (DVA63_11590) 2412276..2412989 + 714 WP_010930444.1 Cytochrome c4 VF
DVA63_RS11500 (DVA63_11595) 2412986..2413903 + 918 WP_010930443.1 c-type cytochrome -
DVA63_RS11505 (DVA63_11600) 2414039..2414671 + 633 WP_010930442.1 guanylate kinase -
DVA63_RS11510 (DVA63_11605) 2414713..2414916 + 204 WP_010930441.1 DNA-directed RNA polymerase subunit omega -
DVA63_RS11515 (DVA63_11610) 2414941..2417220 + 2280 WP_010930440.1 Bifunctional (p)ppGpp synthase/hydrolase SpoT VF
DVA63_RS11520 (DVA63_11615) 2417233..2417961 - 729 WP_003811113.1 Glutamine transport ATP-binding protein GlnQ VF
DVA63_RS11525 (DVA63_11620) 2417958..2418617 - 660 WP_003811112.1 glutamine ABC transporter permease GlnP -
DVA63_RS11530 (DVA63_11625) 2418686..2419438 - 753 WP_010930439.1 glutamine ABC transporter substrate-binding protein GlnH -
DVA63_RS11535 (DVA63_11630) 2419620..2420570 - 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
DVA63_RS11540 (DVA63_11635) 2420728..2421376 + 649 Protein_2283 site-2 protease family protein -
DVA63_RS11545 (DVA63_11640) 2421462..2422367 + 906 WP_033446216.1 4-hydroxy-tetrahydrodipicolinate synthase -
DVA63_RS11550 (DVA63_11645) 2422379..2423506 + 1128 WP_010930437.1 outer membrane protein assembly factor BamC -
DVA63_RS11555 (DVA63_11650) 2423595..2424209 - 615 WP_019248658.1 Major fimbrial subunit SMF-1 VF
DVA63_RS11560 (DVA63_11655) 2424868..2426055 - 1188 WP_010930435.1 cupin domain-containing protein -
DVA63_RS11565 (DVA63_11660) 2426052..2428649 - 2598 WP_033446228.1 DNA mismatch repair protein MutS -
DVA63_RS11570 (DVA63_11665) 2428904..2429119 + 216 WP_010930433.1 dodecin family protein -
DVA63_RS11575 (DVA63_11670) 2429575..2430129 - 555 WP_010930432.1 NAD(P)H-dependent oxidoreductase -
DVA63_RS11580 (DVA63_11675) 2430397..2430957 + 561 WP_010930431.1 membrane protein -
DVA63_RS11585 (DVA63_11680) 2431069..2432373 + 1305 WP_023853587.1 imelysin family protein -
DVA63_RS11590 (DVA63_11685) 2432370..2433881 + 1512 WP_019247498.1 di-heme oxidoredictase family protein -
DVA63_RS11595 (DVA63_11690) 2433933..2434988 + 1056 WP_224019495.1 imelysin family protein -
DVA63_RS11600 (DVA63_11695) 2434978..2436090 + 1113 WP_019249265.1 DUF1513 domain-containing protein -
DVA63_RS11605 (DVA63_11700) 2436188..2437138 + 951 WP_005012067.1 IS481 family transposase IS481v2 Transposase
DVA63_RS11610 (DVA63_11705) 2437135..2437761 - 627 WP_010928449.1 L-threonylcarbamoyladenylate synthase -
DVA63_RS11615 (DVA63_11710) 2437821..2438672 + 852 WP_010930427.1 neutral zinc metallopeptidase -
DVA63_RS11620 (DVA63_11715) 2438776..2439375 + 600 WP_010930426.1 hypothetical protein -
DVA63_RS11625 (DVA63_11720) 2439372..2440136 + 765 WP_010930425.1 hypothetical protein -
DVA63_RS11630 (DVA63_11725) 2440206..2441156 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
DVA63_RS11635 (DVA63_11730) 2441254..2442204 - 951 WP_005013747.1 IS481 family transposase IS481 Transposase
DVA63_RS11640 (DVA63_11735) 2442302..2442910 - 609 WP_010930424.1 recombination mediator RecR -
DVA63_RS11645 (DVA63_11740) 2442961..2443287 - 327 WP_010930423.1 YbaB/EbfC family nucleoid-associated protein -
DVA63_RS11650 (DVA63_11745) 2443334..2445424 - 2091 WP_010930422.1 DNA polymerase III subunit gamma/tau -
DVA63_RS11660 (DVA63_11755) 2446224..2449628 - 3405 WP_010930421.1 UvrD-helicase domain-containing protein -
DVA63_RS11665 (DVA63_11760) 2449641..2452301 - 2661 WP_010930420.1 PD-(D/E)XK nuclease family protein -
DVA63_RS11670 2452323..2452469 - 147 WP_004568212.1 hypothetical protein -
DVA63_RS11675 (DVA63_11765) 2452505..2453707 - 1203 WP_010930419.1 MFS transporter -
DVA63_RS11685 (DVA63_11775) 2454394..2455506 + 1113 WP_023994932.1 D-alanyl-D-alanine endopeptidase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance