MGE detailed information
MGE type: Conjugative plasmid MGE length: 109118 bp
Accession: NZ_CP030921 Location: 1..109118 Organism: Escherichia coli strain KL53 Replicon: plasmid pKL53-M
Accession: NZ_CP030921 Location: 1..109118 Organism: Escherichia coli strain KL53 Replicon: plasmid pKL53-M
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPT07_RS26550 () | 46..1077 | + | 1032 | WP_097360051.1 | replication initiation protein | - |
| CPT07_RS26570 () | 2059..2895 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| CPT07_RS26575 () | 2895..3698 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| CPT07_RS26585 () | 3984..5192 | + | 1209 | WP_001339175.1 | IS4 family transposase IS10R | Transposase |
| CPT07_RS26590 () | 5208..5327 | - | 120 | Protein_4 | LysR family transcriptional regulator | - |
| CPT07_RS26595 () | 5558..6763 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| CPT07_RS26600 () | 7207..7527 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| CPT07_RS26605 () | 7520..7906 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| CPT07_RS26610 () | 7914..8600 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| CPT07_RS26615 () | 8578..9201 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| CPT07_RS26620 () | 9283..10488 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| CPT07_RS26625 () | 10601..11194 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| CPT07_RS26630 () | 11327..11698 | + | 372 | WP_035689358.1 | Transposon Tn10 TetD protein | VF |
| CPT07_RS26635 () | 11708..12916 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| CPT07_RS26650 () | 14146..14769 | - | 624 | WP_000904897.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| CPT07_RS26655 () | 14895..17780 | + | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| CPT07_RS26660 () | 17853..18845 | + | 993 | WP_001579760.1 | hypothetical protein | - |
| CPT07_RS26665 () | 18904..19521 | - | 618 | WP_000521604.1 | hypothetical protein | - |
| CPT07_RS26670 () | 19716..21272 | - | 1557 | WP_001579759.1 | AAA family ATPase | - |
| CPT07_RS26675 () | 21537..22127 | - | 591 | WP_000194568.1 | hypothetical protein | - |
| CPT07_RS26680 () | 22127..22384 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| CPT07_RS26685 () | 22713..23816 | + | 1104 | WP_001127573.1 | nucleotide-binding protein | - |
| CPT07_RS26690 () | 23846..24976 | + | 1131 | WP_000542417.1 | DUF4238 domain-containing protein | - |
| CPT07_RS26695 () | 24976..25266 | + | 291 | WP_001229373.1 | hypothetical protein | - |
| CPT07_RS26700 () | 25263..25460 | - | 198 | WP_000215655.1 | hypothetical protein | - |
| CPT07_RS26705 () | 25785..26918 | + | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| CPT07_RS26710 () | 26938..27222 | + | 285 | WP_000642771.1 | hypothetical protein | - |
| CPT07_RS26715 () | 27393..28040 | - | 648 | WP_000074712.1 | hypothetical protein | - |
| CPT07_RS26720 () | 28028..28363 | - | 336 | WP_000628093.1 | hypothetical protein | - |
| CPT07_RS26725 () | 28543..29124 | - | 582 | WP_000139427.1 | hypothetical protein | - |
| CPT07_RS26735 () | 29694..30044 | + | 351 | WP_000493380.1 | hypothetical protein | - |
| CPT07_RS26740 () | 30114..30722 | + | 609 | WP_000715519.1 | hypothetical protein | - |
| CPT07_RS26745 () | 30790..31572 | + | 783 | WP_001372173.1 | site-specific integrase | - |
| CPT07_RS26750 () | 31710..31985 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| CPT07_RS26755 () | 31979..32623 | - | 645 | WP_000633913.1 | AAA family ATPase | - |
| CPT07_RS26760 () | 32852..33823 | + | 972 | WP_001103690.1 | hypothetical protein | - |
| CPT07_RS26765 () | 33828..34220 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| CPT07_RS26770 () | 34225..35496 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| CPT07_RS26775 () | 35496..35933 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CPT07_RS26780 () | 35930..36178 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| CPT07_RS26790 () | 36596..37498 | + | 903 | WP_000273912.1 | DUF1281 domain-containing protein | - |
| CPT07_RS26795 () | 37495..37806 | + | 312 | WP_139593123.1 | hypothetical protein | - |
| CPT07_RS26800 () | 37882..38565 | + | 684 | WP_087050374.1 | DNA methylase | - |
| CPT07_RS26805 () | 38566..38787 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| CPT07_RS26810 () | 38800..39234 | + | 435 | WP_061089206.1 | DUF1380 family protein | - |
| CPT07_RS27975 () | 39285..40055 | + | 771 | WP_049589792.1 | hypothetical protein | - |
| CPT07_RS26825 () | 40594..40896 | + | 303 | WP_014653258.1 | antirestriction protein | - |
| CPT07_RS26830 () | 40943..41365 | + | 423 | WP_058647586.1 | DUF1380 family protein | - |
| CPT07_RS26835 () | 41362..41553 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| CPT07_RS26850 () | 41831..43498 | - | 1668 | WP_097360037.1 | group II intron reverse transcriptase/maturase | - |
| CPT07_RS26860 () | 44665..45192 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| CPT07_RS26865 () | 45250..45483 | + | 234 | WP_052895272.1 | DUF905 domain-containing protein | - |
| CPT07_RS26870 () | 45542..47500 | + | 1959 | WP_097360036.1 | ParB/RepB/Spo0J family partition protein | - |
| CPT07_RS26875 () | 47555..47989 | + | 435 | WP_024187268.1 | conjugation system SOS inhibitor PsiB | - |
| CPT07_RS26880 () | 47986..48705 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| CPT07_RS26885 () | 48702..49298 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| CPT07_RS26895 () | 49760..50260 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| CPT07_RS26910 () | 50989..51423 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| CPT07_RS26915 () | 51517..51783 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| CPT07_RS26920 () | 51848..52774 | + | 927 | WP_000038402.1 | Recombination-promoting nuclease RpnA | VF |
| CPT07_RS26925 () | 52797..52994 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| CPT07_RS26930 () | 53025..53276 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| CPT07_RS28115 () | 53310..53507 | - | 198 | WP_001161115.1 | hypothetical protein | - |
| CPT07_RS26945 () | 53856..54704 | + | 849 | WP_097360035.1 | DUF4942 domain-containing protein | - |
| CPT07_RS26950 () | 54790..55125 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CPT07_RS26955 () | 55359..55691 | + | 333 | WP_097360034.1 | IncI1-type relaxosome accessory protein NikA | - |
| CPT07_RS26960 () | 55702..58401 | + | 2700 | WP_059271971.1 | Protein TraI | Relaxase |
| CPT07_RS26965 () | 58438..60729 | - | 2292 | WP_011264051.1 | hypothetical protein | - |
| CPT07_RS26970 () | 60722..61792 | - | 1071 | WP_063097584.1 | IncI1-type conjugal transfer protein TrbB | - |
| CPT07_RS26975 () | 61811..63019 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 64512..64569 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 64512..64569 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 64512..64569 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 64512..64569 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| CPT07_RS26985 () | 64624..64776 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| CPT07_RS26990 () | 64848..65099 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| CPT07_RS28120 () | 65758..65934 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| CPT07_RS26995 () | 66326..66535 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| CPT07_RS27000 () | 66607..67257 | - | 651 | WP_001178507.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CPT07_RS27005 () | 67331..69499 | - | 2169 | WP_000698358.1 | DotA/TraY family protein | - |
| CPT07_RS27010 () | 69596..70180 | - | 585 | WP_001037982.1 | IncI1-type conjugal transfer protein TraX | - |
| CPT07_RS27015 () | 70209..71411 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| CPT07_RS27020 () | 71378..71992 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| CPT07_RS27025 () | 71992..75036 | - | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| CPT07_RS27030 () | 75126..75926 | - | 801 | WP_094395947.1 | IncI1-type conjugal transfer protein TraT | - |
| CPT07_RS27040 () | 77253..77411 | - | 159 | WP_097360047.1 | TraS protein | - |
| CPT07_RS27045 () | 77475..77879 | - | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| CPT07_RS27050 () | 77930..78457 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CPT07_RS27055 () | 78457..79161 | - | 705 | WP_000801919.1 | IncI1-type conjugal transfer protein TraP | - |
| CPT07_RS27060 () | 79161..80450 | - | 1290 | WP_097360048.1 | conjugal transfer protein TraO | - |
| CPT07_RS27065 () | 80453..81436 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| CPT07_RS27070 () | 81447..82139 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| CPT07_RS27075 () | 82136..82483 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CPT07_RS27080 () | 82501..86268 | - | 3768 | WP_097360049.1 | DNA primase | - |
| CPT07_RS27085 () | 86358..86909 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| CPT07_RS27090 () | 86924..87214 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| CPT07_RS27095 () | 87211..88359 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| CPT07_RS27100 () | 88356..89174 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| CPT07_RS27105 () | 89171..89629 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| CPT07_RS27110 () | 90024..90608 | - | 585 | WP_000977526.1 | histidine phosphatase family protein | - |
| CPT07_RS27115 () | 90668..91870 | - | 1203 | WP_000976350.1 | conjugal transfer protein TraF | - |
| CPT07_RS27120 () | 91956..92780 | - | 825 | WP_021565538.1 | hypothetical protein | - |
| CPT07_RS27125 () | 92988..93113 | + | 126 | Protein_101 | transposase | - |
| CPT07_RS27130 () | 93170..94462 | - | 1293 | WP_001350014.1 | hypothetical protein | VF |
| CPT07_RS27135 () | 94462..95118 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| CPT07_RS27140 () | 95103..95663 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| CPT07_RS27145 () | 95673..96287 | - | 615 | WP_032072200.1 | hypothetical protein | VF |
| CPT07_RS27150 () | 96304..97389 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CPT07_RS27155 () | 97402..98955 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CPT07_RS27160 () | 98966..99418 | - | 453 | WP_001247331.1 | hypothetical protein | VF |
| CPT07_RS27165 () | 99405..100700 | - | 1296 | WP_001545757.1 | type 4b pilus protein PilO2 | - |
| CPT07_RS27170 () | 100693..102375 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| CPT07_RS27175 () | 102389..102826 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| CPT07_RS27180 () | 102826..103893 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| CPT07_RS27195 () | 104865..105125 | - | 261 | WP_022630593.1 | hypothetical protein | - |
| CPT07_RS27205 () | 105386..105640 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| CPT07_RS27210 () | 105812..106495 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| CPT07_RS27215 () | 106748..107281 | - | 534 | WP_097360050.1 | transcription termination factor NusG | - |
| CPT07_RS27225 () | 107723..108010 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| CPT07_RS27230 () | 107928..108191 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|