MGE detailed information
MGE type: Mobilizable plasmid MGE length: 179444 bp
Accession: NZ_CP029493 Location: 1..179444 Organism: Escherichia coli strain HS30-1 Replicon: plasmid pHS30-1
Accession: NZ_CP029493 Location: 1..179444 Organism: Escherichia coli strain HS30-1 Replicon: plasmid pHS30-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DKQ63_RS22895 () | 17..901 | + | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| DKQ63_RS22900 () | 1194..2003 | + | 810 | WP_089613810.1 | GIY-YIG nuclease family protein | - |
| DKQ63_RS22905 () | 2172..3368 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| DKQ63_RS22910 () | 3385..4386 | + | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| DKQ63_RS22915 () | 4612..6318 | + | 1707 | WP_000067710.1 | hypothetical protein | - |
| DKQ63_RS22920 () | 6378..7967 | + | 1590 | WP_089613812.1 | hypothetical protein | - |
| DKQ63_RS22925 () | 7977..8792 | + | 816 | WP_104730529.1 | hypothetical protein | - |
| DKQ63_RS22930 () | 8828..9409 | + | 582 | WP_000035250.1 | hypothetical protein | - |
| DKQ63_RS22935 () | 9421..9930 | + | 510 | WP_000509940.1 | hypothetical protein | - |
| DKQ63_RS22940 () | 10090..11202 | + | 1113 | Protein_9 | IS4-like element IS421 family transposase | - |
| DKQ63_RS22945 () | 11396..11551 | - | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| DKQ63_RS22950 () | 11949..12197 | + | 249 | Protein_11 | transposase | - |
| DKQ63_RS24340 () | 12207..12338 | - | 132 | Protein_12 | IS30 family transposase | - |
| DKQ63_RS22955 () | 12366..12650 | + | 285 | WP_162521209.1 | IS3 family transposase | - |
| DKQ63_RS22965 () | 13922..14293 | - | 372 | Protein_15 | group II intron reverse transcriptase/maturase | - |
| DKQ63_RS22975 () | 14694..15119 | + | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DKQ63_RS22980 () | 15119..16390 | + | 1272 | WP_001776125.1 | Y-family DNA polymerase | - |
| DKQ63_RS22985 () | 16469..16684 | + | 216 | Protein_18 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| DKQ63_RS22990 () | 16707..17915 | - | 1209 | WP_049239040.1 | transposase | - |
| DKQ63_RS23005 () | 19139..20110 | - | 972 | WP_001698877.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| DKQ63_RS23010 () | 20110..21276 | - | 1167 | WP_000523812.1 | plasmid-partitioning protein SopA | - |
| DKQ63_RS23015 () | 22017..23027 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| DKQ63_RS23020 () | 23672..24376 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DKQ63_RS23025 () | 24969..25874 | + | 906 | WP_000219391.1 | Mph(A) family macrolide 2'-phosphotransferase | - |
| DKQ63_RS23030 () | 25871..27108 | + | 1238 | Protein_25 | MFS transporter | - |
| DKQ63_RS23035 () | 27108..27692 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| DKQ63_RS23045 () | 28097..28789 | - | 693 | WP_064145616.1 | hypothetical protein | - |
| DKQ63_RS23050 () | 28897..29115 | + | 219 | WP_042881802.1 | hypothetical protein | - |
| DKQ63_RS23055 () | 29135..29575 | + | 441 | WP_162852153.1 | phage regulatory CII family protein | - |
| DKQ63_RS23060 () | 29547..30311 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| DKQ63_RS23065 () | 30418..30921 | + | 504 | Protein_31 | permease | - |
| DKQ63_RS23070 () | 31049..31453 | - | 405 | Protein_32 | recombinase family protein | - |
| DKQ63_RS23075 () | 31621..34608 | + | 2988 | WP_104769218.1 | Tn3 family transposase | - |
| DKQ63_RS23080 () | 34632..34994 | - | 363 | Protein_34 | hypothetical protein | - |
| DKQ63_RS23085 () | 35057..35506 | - | 450 | WP_001282381.1 | H-NS histone family protein | - |
| DKQ63_RS23090 () | 35518..37842 | - | 2325 | WP_001235773.1 | type IA DNA topoisomerase | - |
| DKQ63_RS23095 () | 37862..38107 | - | 246 | WP_001243650.1 | hypothetical protein | - |
| DKQ63_RS23100 () | 38522..38992 | - | 471 | WP_000689410.1 | thermonuclease family protein | - |
| DKQ63_RS23105 () | 39120..39956 | - | 837 | WP_000480972.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| DKQ63_RS23110 () | 39956..40759 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| DKQ63_RS23115 () | 40820..41635 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| DKQ63_RS23130 () | 41820..42503 | - | 684 | Protein_42 | replication protein C | - |
| DKQ63_RS23135 () | 42567..43271 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| DKQ63_RS23140 () | 43325..45634 | + | 2310 | Protein_44 | Tn3 family transposase | - |
| DKQ63_RS23145 () | 45657..45917 | - | 261 | Protein_45 | PAS domain-containing protein | - |
| DKQ63_RS23155 () | 45927..46631 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| DKQ63_RS23160 () | 46836..47627 | - | 792 | WP_001206356.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 | - |
| DKQ63_RS23165 () | 47633..47923 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| DKQ63_RS23170 () | 48035..48532 | - | 498 | WP_001083725.1 | trimethoprim-resistant dihydrofolate reductase DfrA12 | - |
| DKQ63_RS23175 () | 48677..48874 | + | 198 | Protein_50 | phage integrase N-terminal SAM-like domain-containing protein | - |
| DKQ63_RS23180 () | 48937..49641 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DKQ63_RS23185 () | 49831..50646 | - | 816 | WP_000018329.1 | aminoglycoside O-phosphotransferase APH(3')-Ia | - |
| DKQ63_RS23190 () | 50797..51501 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DKQ63_RS23195 () | 51732..52595 | + | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| DKQ63_RS23200 () | 52633..52878 | + | 246 | WP_001354008.1 | GrpB family protein | - |
| DKQ63_RS23205 () | 53347..54138 | + | 792 | WP_000034420.1 | sulfonamide-resistant dihydropteroate synthase Sul3 | - |
| DKQ63_RS24210 () | 54141..54416 | - | 276 | WP_109023896.1 | hypothetical protein | - |
| DKQ63_RS23210 () | 54418..55053 | + | 636 | Protein_58 | transposase | - |
| DKQ63_RS23220 () | 55318..55650 | - | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| DKQ63_RS23225 () | 55820..56611 | - | 792 | WP_001206316.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | - |
| DKQ63_RS23230 () | 56704..57963 | - | 1260 | WP_000095725.1 | chloramphenicol efflux MFS transporter CmlA1 | - |
| DKQ63_RS23235 () | 58225..59016 | - | 792 | WP_001261740.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 | - |
| DKQ63_RS23240 () | 59074..59682 | - | 609 | WP_000050382.1 | HAD-IB family hydrolase | - |
| DKQ63_RS23245 () | 59778..60620 | - | 843 | WP_001456218.1 | alpha/beta fold putative hydrolase EstX | - |
| DKQ63_RS23250 () | 60787..61800 | + | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| DKQ63_RS24215 () | 62003..62353 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| DKQ63_RS23260 () | 62529..63089 | + | 561 | WP_001161490.1 | recombinase family protein | - |
| DKQ63_RS24345 () | 63093..63464 | + | 372 | Protein_68 | DUF4158 domain-containing protein | - |
| DKQ63_RS24350 () | 63444..63689 | + | 246 | WP_041937891.1 | hypothetical protein | - |
| DKQ63_RS23270 () | 63721..64371 | - | 651 | WP_038989485.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| DKQ63_RS23275 () | 64477..65676 | + | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| DKQ63_RS23280 () | 65708..66592 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| DKQ63_RS23285 () | 66729..67136 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| DKQ63_RS23290 () | 67125..68876 | + | 1752 | Protein_74 | Tn3-like element TnAs1 family transposase | - |
| DKQ63_RS23295 () | 68997..70073 | - | 1077 | WP_000227969.1 | IS110 family transposase | - |
| DKQ63_RS23305 () | 70355..71211 | - | 857 | Protein_76 | IS3 family transposase | - |
| DKQ63_RS23310 () | 71416..71832 | - | 417 | WP_000754566.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DKQ63_RS23315 () | 71829..72059 | - | 231 | WP_001261276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| DKQ63_RS23325 () | 72258..72749 | - | 492 | Protein_79 | IS5-like element ISKpn26 family transposase | - |
| DKQ63_RS23330 () | 72855..73559 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DKQ63_RS23340 () | 73613..73822 | + | 210 | Protein_81 | IS110 family transposase | - |
| DKQ63_RS23345 () | 74099..74574 | - | 476 | Protein_82 | IS1 family transposase | - |
| DKQ63_RS23350 () | 74967..75995 | + | 1029 | WP_054528934.1 | tyrosine-type recombinase/integrase | - |
| DKQ63_RS23355 () | 76018..76908 | - | 891 | Protein_84 | IS30-like element IS30 family transposase | - |
| DKQ63_RS23360 () | 76958..77926 | - | 969 | WP_077250684.1 | IS5 family transposase | - |
| DKQ63_RS23365 () | 78507..78893 | + | 387 | WP_001039464.1 | hypothetical protein | - |
| DKQ63_RS23375 () | 79033..80001 | - | 969 | WP_020956880.1 | IS5 family transposase | - |
| DKQ63_RS23385 () | 81183..81491 | - | 309 | Protein_88 | RepB family plasmid replication initiator protein | - |
| DKQ63_RS23390 () | 81501..82198 | - | 698 | Protein_89 | IS1 family transposase | - |
| DKQ63_RS23395 () | 82350..83468 | - | 1119 | Protein_90 | group II intron reverse transcriptase/maturase | - |
| DKQ63_RS23405 () | 84803..85337 | + | 535 | Protein_92 | IS3 family transposase | - |
| DKQ63_RS23415 () | 85655..86635 | - | 981 | WP_000019402.1 | IS5-like element IS5 family transposase | - |
| DKQ63_RS23425 () | 86693..87994 | - | 1302 | Protein_94 | TraI domain-containing protein | - |
| DKQ63_RS23430 () | 88005..88727 | - | 723 | WP_000133023.1 | hypothetical protein | - |
| DKQ63_RS23435 () | 88724..89209 | - | 486 | WP_000071636.1 | hypothetical protein | - |
| DKQ63_RS23440 () | 89864..90835 | - | 972 | WP_170386723.1 | IS30-like element ISApl1 family transposase | - |
| DKQ63_RS23445 () | 90928..91650 | - | 723 | WP_039003037.1 | PAP2 family protein | - |
| DKQ63_RS23450 () | 91722..93347 | - | 1626 | WP_049589868.1 | phosphoethanolamine--lipid A transferase MCR-1.1 | - |
| DKQ63_RS23455 () | 93543..94514 | - | 972 | WP_170386723.1 | IS30-like element ISApl1 family transposase | - |
| DKQ63_RS23460 () | 94717..95515 | + | 799 | Protein_101 | trhR | - |
| DKQ63_RS23465 () | 95518..96029 | + | 512 | Protein_102 | hypothetical protein | - |
| DKQ63_RS23470 () | 96643..97689 | + | 1047 | WP_077478202.1 | thioredoxin family protein | - |
| DKQ63_RS23475 () | 97679..98110 | + | 432 | Protein_104 | IncHI-type conjugal transfer protein TrhH | - |
| DKQ63_RS23480 () | 98125..99009 | - | 885 | Protein_105 | IS3-like element ISEc52 family transposase | - |
| DKQ63_RS23485 () | 99057..99275 | + | 219 | Protein_106 | IS91 family transposase | - |
| DKQ63_RS23490 () | 99860..103375 | + | 3516 | WP_104769191.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| DKQ63_RS23495 () | 103550..103755 | - | 206 | Protein_108 | hypothetical protein | - |
| DKQ63_RS23500 () | 103745..103945 | + | 201 | WP_000896262.1 | DUF839 domain-containing protein | - |
| DKQ63_RS23505 () | 104235..104522 | - | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DKQ63_RS23510 () | 104519..104770 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DKQ63_RS23520 () | 105382..109320 | + | 3939 | WP_104730517.1 | helicase | - |
| DKQ63_RS23525 () | 109354..109794 | + | 441 | WP_023352064.1 | hypothetical protein | - |
| DKQ63_RS23530 () | 109791..110039 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| DKQ63_RS23535 () | 110078..110799 | - | 722 | Protein_115 | helix-turn-helix domain-containing protein | - |
| DKQ63_RS23540 () | 111034..111684 | + | 651 | WP_104730518.1 | EAL domain-containing protein | - |
| DKQ63_RS23545 () | 111777..112421 | - | 645 | WP_001514450.1 | hypothetical protein | - |
| DKQ63_RS23550 () | 112610..113170 | - | 561 | WP_104730519.1 | Ref family protein | - |
| DKQ63_RS23555 () | 113420..113731 | - | 312 | WP_038989442.1 | hypothetical protein | - |
| DKQ63_RS23560 () | 113782..114813 | - | 1032 | WP_089613821.1 | site-specific integrase | - |
| DKQ63_RS23565 () | 114821..115042 | - | 222 | WP_042630942.1 | hypothetical protein | - |
| DKQ63_RS23580 () | 115647..115856 | + | 210 | WP_000874156.1 | hypothetical protein | - |
| DKQ63_RS23585 () | 115967..116818 | + | 852 | WP_000611661.1 | hypothetical protein | - |
| DKQ63_RS23590 () | 116851..117162 | - | 312 | WP_001351993.1 | phage antirepressor Ant | - |
| DKQ63_RS23600 () | 117465..118508 | - | 1044 | WP_069067567.1 | DUF968 domain-containing protein | - |
| DKQ63_RS23610 () | 118712..119428 | - | 717 | Protein_126 | Tn3 family transposase | - |
| DKQ63_RS23615 () | 119462..120760 | - | 1299 | Protein_127 | Tn3-like element Tn3 family transposase | - |
| DKQ63_RS23620 () | 120828..121532 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| DKQ63_RS23630 () | 121837..122283 | + | 447 | Protein_129 | DUF3363 domain-containing protein | - |
| DKQ63_RS23635 () | 122500..123714 | + | 1215 | WP_110991584.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| DKQ63_RS23640 () | 123742..124047 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| DKQ63_RS23645 () | 124159..125652 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| DKQ63_RS23655 () | 125940..126644 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| DKQ63_RS23665 () | 126699..127079 | + | 381 | Protein_134 | recombinase family protein | - |
| DKQ63_RS23670 () | 127262..128122 | + | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| DKQ63_RS23675 () | 128343..129040 | - | 698 | Protein_136 | IS1 family transposase | - |
| DKQ63_RS23685 () | 129119..130585 | + | 1467 | WP_074139093.1 | PAS domain-containing methyl-accepting chemotaxis protein | - |
| DKQ63_RS23695 () | 130821..131201 | - | 381 | WP_001216039.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| DKQ63_RS23700 () | 131201..131422 | - | 222 | WP_001190711.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| DKQ63_RS23710 () | 131687..132384 | + | 698 | Protein_140 | IS1 family transposase | - |
| DKQ63_RS23715 () | 132401..132727 | - | 327 | Protein_141 | hypothetical protein | - |
| DKQ63_RS23720 () | 132800..134062 | - | 1263 | WP_069067570.1 | hypothetical protein | - |
| DKQ63_RS23730 () | 134364..135065 | - | 702 | WP_104730539.1 | hypothetical protein | - |
| DKQ63_RS23735 () | 135062..135739 | - | 678 | Protein_144 | metallophosphoesterase | - |
| DKQ63_RS23740 () | 135736..136362 | - | 627 | WP_000484116.1 | norphogenetic protein | - |
| DKQ63_RS23745 () | 136260..136922 | - | 663 | WP_012817939.1 | hypothetical protein | - |
| DKQ63_RS23750 () | 136864..137019 | - | 156 | WP_001567997.1 | hypothetical protein | - |
| DKQ63_RS23755 () | 137086..137397 | - | 312 | Protein_148 | VRR-NUC domain-containing protein | - |
| DKQ63_RS23760 () | 137472..137729 | + | 258 | Protein_149 | transposase | - |
| DKQ63_RS23765 () | 137742..138893 | - | 1152 | WP_110991585.1 | IS30-like element IS30 family transposase | - |
| DKQ63_RS23770 () | 138961..139263 | - | 303 | Protein_151 | transposase | - |
| DKQ63_RS23775 () | 139306..139500 | + | 195 | Protein_152 | iron-containing alcohol dehydrogenase | - |
| DKQ63_RS23780 () | 139655..140389 | - | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| DKQ63_RS23785 () | 140479..140574 | + | 96 | Protein_154 | PerC family transcriptional regulator | - |
| DKQ63_RS23795 () | 141981..142748 | + | 768 | WP_001711193.1 | hypothetical protein | - |
| DKQ63_RS23800 () | 142801..143154 | - | 354 | WP_161953766.1 | hypothetical protein | - |
| DKQ63_RS23805 () | 143160..143825 | - | 666 | WP_023135658.1 | AAA family ATPase | - |
| DKQ63_RS23810 () | 144145..144414 | + | 270 | WP_001711191.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DKQ63_RS23815 () | 144422..144943 | + | 522 | WP_072662620.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DKQ63_RS24235 () | 145009..145152 | + | 144 | WP_162618456.1 | hypothetical protein | - |
| DKQ63_RS23825 () | 145167..145475 | - | 309 | Protein_162 | DDE-type integrase/transposase/recombinase | - |
| DKQ63_RS23830 () | 145492..146568 | - | 1077 | WP_038989268.1 | IS110-like element ISEc21 family transposase | - |
| DKQ63_RS23840 () | 146850..147446 | - | 597 | Protein_164 | IS3 family transposase | - |
| DKQ63_RS23845 () | 147511..148514 | + | 1004 | Protein_165 | IS30-like element IS30 family transposase | - |
| DKQ63_RS24355 () | 149820..149972 | + | 153 | Protein_167 | IS30 family transposase | - |
| DKQ63_RS23855 () | 149985..150242 | - | 258 | Protein_168 | IS3 family transposase | - |
| DKQ63_RS23865 () | 150338..151603 | + | 1266 | Protein_169 | recombinase RecA | - |
| DKQ63_RS23870 () | 151905..154982 | - | 3078 | WP_104730527.1 | DEAD/DEAH box helicase family protein | - |
| DKQ63_RS23875 () | 154992..156836 | - | 1845 | WP_104730528.1 | site-specific DNA-methyltransferase | - |
| DKQ63_RS23880 () | 156911..157597 | - | 687 | WP_104730526.1 | DUF4391 domain-containing protein | - |
| DKQ63_RS23885 () | 157601..160933 | - | 3333 | WP_104730525.1 | DEAD/DEAH box helicase family protein | - |
| DKQ63_RS23895 () | 161297..162277 | + | 981 | WP_110991587.1 | IS5 family transposase | - |
| DKQ63_RS23905 () | 162569..166042 | - | 3474 | WP_110991588.1 | cellulose biosynthesis protein BcsC | - |
| DKQ63_RS23915 () | 166509..166895 | - | 387 | Protein_176 | IS200/IS605 family transposase | - |
| DKQ63_RS23930 () | 167294..168507 | + | 1214 | WP_164523141.1 | IS3 family transposase | - |
| DKQ63_RS23935 () | 168550..169743 | - | 1194 | Protein_178 | group II intron reverse transcriptase/maturase | - |
| DKQ63_RS23945 () | 170487..172637 | - | 2151 | WP_001351999.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| DKQ63_RS23950 () | 172701..174806 | - | 2106 | WP_110991589.1 | UDP-forming cellulose synthase catalytic subunit | - |
| DKQ63_RS23960 () | 174887..175584 | + | 698 | Protein_181 | IS1 family transposase | - |
| DKQ63_RS23965 () | 175519..176805 | - | 1287 | WP_104730562.1 | GGDEF domain-containing protein | - |
| DKQ63_RS23970 () | 176853..177550 | - | 698 | Protein_183 | IS1 family transposase | - |
| DKQ63_RS23980 () | 177888..178135 | + | 248 | Protein_184 | IS1 family transposase | - |
| DKQ63_RS23985 () | 178127..178824 | - | 698 | Protein_185 | IS1 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|