MGE detailed information
MGE type: Genomic_island MGE length: 101630 bp
Accession: NZ_CP029242 Location: 4173154..4274783 Organism: Escherichia coli strain ECCRA-119 Replicon: chromosome
Accession: NZ_CP029242 Location: 4173154..4274783 Organism: Escherichia coli strain ECCRA-119 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7235_RS21580 () | 4168473..4169375 | - | 903 | WP_023277720.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| C7235_RS21585 () | 4169395..4169898 | - | 504 | WP_000872004.1 | type 1 fimbria minor subunit FimG | - |
| C7235_RS21590 () | 4169911..4170441 | - | 531 | WP_001244823.1 | type 1 fimbria minor subunit FimF | - |
| C7235_RS21595 () | 4170451..4173087 | - | 2637 | WP_000120944.1 | fimbrial usher FimD | - |
| C7235_RS21600 () | 4173154..4173879 | - | 726 | WP_000066573.1 | Chaperone protein FimC | VF |
| C7235_RS21605 () | 4173916..4174455 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| C7235_RS21610 () | 4174520..4175068 | - | 549 | WP_000695543.1 | Fimbrial subunit type 1 | VF |
| C7235_RS21620 () | 4175548..4176144 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| C7235_RS21625 () | 4176622..4177224 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| C7235_RS21645 () | 4178411..4179108 | + | 698 | Protein_3948 | IS1 family transposase IS1R | Transposase |
| C7235_RS21655 () | 4179419..4180705 | + | 1287 | WP_000377419.1 | hypothetical protein | - |
| C7235_RS21660 () | 4180702..4184988 | + | 4287 | WP_000007257.1 | hypothetical protein | - |
| C7235_RS21665 () | 4184999..4185847 | + | 849 | WP_000092642.1 | hypothetical protein | - |
| C7235_RS21670 () | 4185850..4187007 | + | 1158 | WP_001004904.1 | hypothetical protein | - |
| C7235_RS21675 () | 4186997..4188682 | + | 1686 | WP_000323666.1 | ATP-binding protein | - |
| C7235_RS21680 () | 4188819..4189058 | + | 240 | Protein_3954 | hypothetical protein | - |
| C7235_RS21685 () | 4189072..4190280 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| C7235_RS27915 () | 4190350..4190487 | - | 138 | WP_001611300.1 | hypothetical protein | - |
| C7235_RS21695 () | 4192183..4192784 | - | 602 | Protein_3957 | IS481 family transposase ISKpn28 | Transposase |
| C7235_RS21705 () | 4193244..4194406 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| C7235_RS21710 () | 4194543..4195334 | - | 792 | WP_000902464.1 | hypothetical protein | - |
| C7235_RS21715 () | 4195405..4196226 | - | 822 | WP_000900255.1 | hypothetical protein | - |
| C7235_RS21720 () | 4196264..4196713 | - | 450 | WP_001609859.1 | hypothetical protein | - |
| C7235_RS21725 () | 4196962..4197513 | - | 552 | WP_000387046.1 | hypothetical protein | - |
| C7235_RS21735 () | 4197699..4198502 | - | 804 | WP_001609855.1 | hypothetical protein | - |
| C7235_RS21740 () | 4199153..4199500 | + | 348 | WP_001617303.1 | hypothetical protein | - |
| C7235_RS21745 () | 4199779..4200555 | - | 777 | WP_000218942.1 | nucleotidyltransferase domain-containing protein | - |
| C7235_RS21750 () | 4200558..4201061 | - | 504 | WP_001072164.1 | SLATT domain-containing protein | - |
| C7235_RS21755 () | 4201265..4201747 | + | 483 | WP_000538703.1 | hypothetical protein | - |
| C7235_RS21760 () | 4201692..4202186 | + | 495 | WP_123906543.1 | phage terminase large subunit family protein | - |
| C7235_RS21765 () | 4202200..4203222 | + | 1023 | Protein_3969 | IS21 family transposase IS100kyp | Transposase |
| C7235_RS21770 () | 4203219..4204001 | + | 783 | WP_072133117.1 | IS21 family transposase IS100kyp | Transposase |
| C7235_RS21775 () | 4204217..4204948 | - | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| C7235_RS21785 () | 4205618..4206148 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| C7235_RS21795 () | 4207768..4208622 | + | 855 | WP_000110727.1 | hypothetical protein | - |
| C7235_RS21800 () | 4208619..4209581 | - | 963 | WP_000126799.1 | hypothetical protein | - |
| C7235_RS21805 () | 4209687..4210571 | + | 885 | WP_000010383.1 | 50S ribosome-binding GTPase | - |
| C7235_RS21810 () | 4210774..4211454 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| C7235_RS21815 () | 4211602..4212279 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| C7235_RS21820 () | 4212285..4212518 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| C7235_RS21825 () | 4212716..4213924 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| C7235_RS21835 () | 4213946..4214764 | + | 819 | WP_001175163.1 | DUF945 domain-containing protein | - |
| C7235_RS21840 () | 4214856..4215341 | + | 486 | WP_000206664.1 | antirestriction protein | - |
| C7235_RS21845 () | 4215356..4215832 | + | 477 | WP_001186165.1 | RadC family protein | - |
| C7235_RS21850 () | 4215919..4216140 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| C7235_RS21855 () | 4216220..4216588 | + | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C7235_RS21860 () | 4216678..4217055 | + | 378 | WP_001094443.1 | TA system toxin CbtA family protein | Toxin Detail |
| C7235_RS21865 () | 4217052..4217540 | + | 489 | WP_000761685.1 | hypothetical protein | - |
| C7235_RS21870 () | 4217560..4217757 | + | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| C7235_RS27920 () | 4217842..4217988 | + | 147 | WP_001290178.1 | hypothetical protein | - |
| C7235_RS21880 () | 4218450..4219715 | + | 1266 | WP_001218329.1 | Prophage integrase IntA ; Integrase | Integrase |
| C7235_RS21885 () | 4219916..4221385 | - | 1470 | WP_001022619.1 | Serine/threonine-protein kinase PrkC | VF |
| C7235_RS21895 () | 4221672..4222880 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| C7235_RS21900 () | 4222896..4223015 | - | 120 | Protein_3992 | LysR family transcriptional regulator | - |
| C7235_RS21905 () | 4223246..4224451 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| C7235_RS21910 () | 4224895..4225215 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| C7235_RS21915 () | 4225208..4225594 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| C7235_RS21920 () | 4225602..4226288 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| C7235_RS21925 () | 4226266..4226889 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| C7235_RS21930 () | 4226971..4228176 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| C7235_RS21935 () | 4228289..4228882 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| C7235_RS21940 () | 4229015..4229386 | + | 372 | WP_035689358.1 | Transposon Tn10 TetD protein | VF |
| C7235_RS21945 () | 4229396..4230604 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| C7235_RS21955 () | 4230711..4231187 | + | 477 | Protein_4002 | inovirus-type Gp2 protein | - |
| C7235_RS27675 () | 4231307..4231456 | - | 150 | WP_162014428.1 | hypothetical protein | - |
| C7235_RS21960 () | 4231471..4232046 | + | 576 | WP_021559485.1 | hypothetical protein | - |
| C7235_RS21965 () | 4232115..4232351 | + | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| C7235_RS21970 () | 4232594..4233142 | + | 549 | WP_001566979.1 | hypothetical protein | - |
| C7235_RS21975 () | 4233161..4233505 | - | 345 | WP_001566978.1 | ProQ/FinO family protein | - |
| C7235_RS21980 () | 4233502..4233675 | - | 174 | WP_001566977.1 | hypothetical protein | - |
| C7235_RS27680 () | 4233811..4234017 | + | 207 | WP_157839027.1 | hypothetical protein | - |
| C7235_RS21990 () | 4234383..4234817 | + | 435 | WP_021559484.1 | H-NS histone family protein | - |
| C7235_RS21995 () | 4235233..4235802 | - | 570 | WP_021559483.1 | hypothetical protein | - |
| C7235_RS22000 () | 4235903..4237135 | - | 1233 | WP_021559482.1 | dNTP triphosphohydrolase | - |
| C7235_RS22005 () | 4237539..4239251 | + | 1713 | WP_064055550.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| C7235_RS27925 () | 4239249..4239581 | - | 333 | Protein_4014 | IS66 family insertion sequence element accessory protein TnpB | - |
| C7235_RS22020 () | 4239873..4241237 | - | 1365 | WP_033546150.1 | Phosphoglycerate transporter protein | VF |
| C7235_RS22025 () | 4241636..4241788 | + | 153 | Protein_4016 | IS3 family transposase ISEc31 | Transposase |
| C7235_RS22030 () | 4241779..4242473 | - | 695 | Protein_4017 | transposase | - |
| C7235_RS22035 () | 4242515..4243247 | + | 733 | Protein_4018 | transcriptional regulator | - |
| C7235_RS22040 () | 4243615..4244477 | + | 863 | Protein_4019 | IS21 family transposase ISEc10 | Transposase |
| C7235_RS22045 () | 4244929..4245186 | + | 258 | WP_000523766.1 | adhesin biosynthesis transcription regulatory family protein | - |
| C7235_RS22050 () | 4245231..4245752 | + | 522 | WP_000920487.1 | Pap fimbrial major pilin protein | VF |
| C7235_RS22055 () | 4245838..4246035 | + | 198 | Protein_4022 | PAP fimbrial minor pilin protein | VF |
| C7235_RS22065 () | 4246145..4247353 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| C7235_RS22070 () | 4247368..4247763 | + | 396 | Protein_4024 | PAP fimbrial minor pilin protein | VF |
| C7235_RS22075 () | 4247884..4250394 | + | 2511 | WP_021559470.1 | Outer membrane usher protein PapC | VF |
| C7235_RS22080 () | 4250463..4251194 | + | 732 | WP_001171049.1 | Chaperone protein PapD | VF |
| C7235_RS22085 () | 4251231..4251794 | + | 564 | WP_021559469.1 | hypothetical protein | - |
| C7235_RS22090 () | 4251878..4252396 | + | 519 | WP_021559468.1 | Fimbrial adapter PapF | VF |
| C7235_RS22095 () | 4252419..4253411 | + | 993 | WP_042048164.1 | hypothetical protein | - |
| C7235_RS22100 () | 4253468..4254250 | + | 783 | WP_000481333.1 | EAL domain-containing protein | - |
| C7235_RS22105 () | 4254520..4254711 | - | 192 | Protein_4031 | transposase | - |
| C7235_RS22110 () | 4255047..4255279 | - | 233 | Protein_4032 | IS110 family transposase | - |
| C7235_RS22120 () | 4255847..4257112 | - | 1266 | WP_001218930.1 | Prophage integrase IntA ; Integrase | Integrase |
| C7235_RS22135 () | 4257618..4257827 | + | 210 | WP_001514390.1 | hypothetical protein | - |
| C7235_RS22140 () | 4257910..4259412 | + | 1503 | WP_001294545.1 | DUF853 domain-containing protein | - |
| C7235_RS22145 () | 4259531..4260613 | - | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| C7235_RS22150 () | 4260613..4261713 | - | 1101 | WP_000584114.1 | LPS export ABC transporter permease LptF | - |
| C7235_RS28100 () | 4261776..4261826 | - | 51 | WP_211180521.1 | protein YtgA | - |
| C7235_RS22155 () | 4261980..4263491 | + | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| C7235_RS22160 () | 4263625..4264068 | + | 444 | WP_000786399.1 | DNA polymerase III subunit chi | - |
| C7235_RS22165 () | 4264068..4266923 | + | 2856 | WP_000416392.1 | valine--tRNA ligase | - |
| C7235_RS22170 () | 4266979..4268175 | - | 1197 | WP_000079641.1 | DUF898 domain-containing protein | - |
| C7235_RS22175 () | 4268368..4268871 | + | 504 | WP_001059414.1 | GNAT family N-acetyltransferase | - |
| C7235_RS22180 () | 4268917..4269333 | - | 417 | WP_000002953.1 | ribonuclease E inhibitor RraB | - |
| C7235_RS22185 () | 4269495..4270499 | + | 1005 | WP_000086237.1 | Ornithine carbamoyltransferase subunit I | VF |
| C7235_RS22190 () | 4270600..4270830 | - | 231 | WP_001309158.1 | hypothetical protein | - |
| C7235_RS22195 () | 4270817..4272160 | - | 1344 | WP_001331059.1 | DNA-binding protein | - |
| C7235_RS22200 () | 4272283..4272735 | - | 453 | WP_001331058.1 | toxin-antitoxin biofilm protein TabA | - |
| C7235_RS22205 () | 4272880..4273473 | - | 594 | WP_000256656.1 | TetR/AcrR family transcriptional regulator | - |
| C7235_RS22210 () | 4273544..4274257 | + | 714 | WP_000500727.1 | Cyclic-di-GMP-binding biofilm dispersal mediator protein | VF |
| C7235_RS22215 () | 4274388..4274783 | + | 396 | WP_000230281.1 | RidA family protein | - |
| C7235_RS22225 () | 4275064..4275198 | + | 135 | WP_001296693.1 | pyr operon leader peptide | - |
| C7235_RS22230 () | 4275202..4276137 | + | 936 | WP_000013046.1 | aspartate carbamoyltransferase | - |
| C7235_RS22235 () | 4276150..4276611 | + | 462 | WP_000148581.1 | aspartate carbamoyltransferase regulatory subunit | - |
| C7235_RS22240 () | 4276684..4277070 | + | 387 | WP_000047539.1 | 2-iminobutanoate/2-iminopropanoate deaminase | - |
| C7235_RS22245 () | 4277136..4277591 | + | 456 | WP_001118337.1 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|