MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93435 bp
Accession: NZ_CP029107 Location: 1..93435 Organism: Escherichia coli strain AR437 Replicon: plasmid unnamed5
Accession: NZ_CP029107 Location: 1..93435 Organism: Escherichia coli strain AR437 Replicon: plasmid unnamed5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC24_RS01135 () | 290..472 | + | 183 | WP_000968309.1 | hypothetical protein | - |
| - () | 611..672 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 611..672 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 611..672 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 611..672 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| CSC24_RS01145 () | 659..865 | + | 207 | WP_015387399.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| CSC24_RS01150 () | 1149..1406 | + | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| CSC24_RS01160 () | 1642..1716 | + | 75 | WP_032336874.1 | RepA leader peptide Tap | - |
| CSC24_RS01165 () | 1709..2155 | + | 447 | Protein_5 | incFII family plasmid replication initiator RepA | - |
| CSC24_RS01170 () | 2101..2583 | - | 483 | Protein_6 | VENN motif pre-toxin domain-containing protein | - |
| CSC24_RS01175 () | 3476..4696 | + | 1221 | WP_000410951.1 | arginine deiminase | - |
| CSC24_RS01180 () | 4707..5618 | + | 912 | WP_000440183.1 | carbamate kinase | - |
| CSC24_RS01185 () | 5703..6707 | + | 1005 | WP_086625071.1 | Ornithine carbamoyltransferase | VF |
| CSC24_RS01190 () | 6755..8158 | + | 1404 | WP_000514417.1 | YfcC family protein | - |
| CSC24_RS01195 () | 8239..8718 | + | 480 | WP_001496175.1 | ArgR family transcriptional regulator | - |
| CSC24_RS01200 () | 8782..9123 | - | 342 | Protein_12 | IS66 family transposase IS682 | Transposase |
| CSC24_RS01205 () | 9075..9296 | - | 222 | WP_000080227.1 | IS66 family transposase ISEc43 | Transposase |
| CSC24_RS01210 () | 9327..9677 | - | 351 | WP_000624725.1 | IS66 family transposase ISEc47 | Transposase |
| CSC24_RS01215 () | 9674..10036 | - | 363 | WP_059330006.1 | IS66 family transposase ISEc23 | Transposase |
| CSC24_RS01220 () | 10145..10842 | - | 698 | Protein_16 | IS1 family transposase IS1A | Transposase |
| CSC24_RS01230 () | 10875..11453 | + | 579 | WP_032152936.1 | DUF2726 domain-containing protein | - |
| CSC24_RS01235 () | 11866..12219 | - | 354 | WP_000005489.1 | hypothetical protein | - |
| CSC24_RS01240 () | 12691..13713 | - | 1023 | WP_000156883.1 | IS110 family transposase ISSm1 | Transposase |
| CSC24_RS01250 () | 14118..14375 | + | 258 | WP_000083821.1 | replication regulatory protein RepA | - |
| CSC24_RS01260 () | 14610..14684 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CSC24_RS01265 () | 14677..15534 | + | 858 | WP_032152935.1 | incFII family plasmid replication initiator RepA | - |
| CSC24_RS01275 () | 16473..17126 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| CSC24_RS26000 () | 17219..17476 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| CSC24_RS01280 () | 17409..17810 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| CSC24_RS01290 () | 17947..20844 | - | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| CSC24_RS01295 () | 20939..21544 | + | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| CSC24_RS01300 () | 21568..22317 | - | 750 | Protein_28 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CSC24_RS01305 () | 22306..22713 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| CSC24_RS01310 () | 22851..23735 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| CSC24_RS01315 () | 23767..24966 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| CSC24_RS01320 () | 25072..25722 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CSC24_RS01325 () | 25754..25996 | - | 243 | WP_032140899.1 | hypothetical protein | - |
| CSC24_RS01330 () | 26038..27552 | - | 1515 | Protein_34 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CSC24_RS01335 () | 27618..28322 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CSC24_RS01340 () | 28466..29020 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| CSC24_RS01345 () | 29151..29981 | + | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| CSC24_RS01350 () | 30119..30559 | + | 441 | Protein_38 | CatB-related O-acetyltransferase | - |
| CSC24_RS01355 () | 30613..31317 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CSC24_RS01360 () | 31382..33625 | - | 2244 | Protein_40 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CSC24_RS01365 () | 33639..33971 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| CSC24_RS01370 () | 34018..34893 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| CSC24_RS01375 () | 35149..35436 | - | 288 | Protein_43 | transposase | - |
| CSC24_RS01380 () | 35502..36206 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CSC24_RS01385 () | 36254..36943 | + | 690 | Protein_45 | IS6 family transposase IS6100 | Transposase |
| CSC24_RS01400 () | 37436..38020 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| CSC24_RS01405 () | 38020..39258 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| CSC24_RS01410 () | 39255..40160 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| CSC24_RS01420 () | 40282..40986 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CSC24_RS01425 () | 41011..41385 | + | 375 | WP_024193849.1 | IS66 family transposase ISKpn24 | Transposase |
| CSC24_RS01430 () | 41434..42379 | + | 946 | Protein_51 | IS66 family transposase ISEc8 | Transposase |
| CSC24_RS01440 () | 42465..43487 | + | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| CSC24_RS01445 () | 43484..44266 | + | 783 | WP_108711110.1 | IS21 family transposase IS100kyp | Transposase |
| CSC24_RS01450 () | 44334..44942 | + | 609 | Protein_54 | IS66 family transposase ISEc22 | Transposase |
| CSC24_RS01455 () | 45005..45796 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| CSC24_RS01460 () | 45803..47773 | - | 1971 | WP_001496335.1 | Hemin receptor | VF |
| CSC24_RS01465 () | 48055..48491 | + | 437 | Protein_57 | IS3 family transposase IS2 | Transposase |
| CSC24_RS01470 () | 49016..49288 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| CSC24_RS01475 () | 49734..49909 | + | 176 | Protein_59 | IS3 family transposase | - |
| CSC24_RS01480 () | 50135..51304 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| CSC24_RS01485 () | 51671..51859 | + | 189 | WP_001309252.1 | hypothetical protein | - |
| CSC24_RS01490 () | 51980..52720 | + | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| CSC24_RS01495 () | 53005..53982 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| CSC24_RS01505 () | 54728..55051 | + | 324 | Protein_64 | IS21 family transposase IS21 | Transposase |
| CSC24_RS26245 () | 55053..55157 | + | 105 | Protein_65 | AAA family ATPase | - |
| CSC24_RS01515 () | 55218..55731 | + | 514 | Protein_66 | DUF4113 domain-containing protein | - |
| CSC24_RS01520 () | 55911..56608 | - | 698 | Protein_67 | IS1 family transposase IS1R | Transposase |
| CSC24_RS01535 () | 56964..57878 | + | 915 | WP_000949005.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| CSC24_RS01540 () | 57878..58705 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| CSC24_RS01545 () | 58702..59559 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| CSC24_RS01550 () | 59556..60413 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| CSC24_RS01555 () | 60647..60904 | - | 258 | Protein_72 | Tn3 family transposase | - |
| CSC24_RS01560 () | 60902..61315 | + | 414 | Protein_73 | phosphopyruvate hydratase | - |
| CSC24_RS01570 () | 61656..62036 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| CSC24_RS01575 () | 62416..63609 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| CSC24_RS01580 () | 63745..65469 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| CSC24_RS01585 () | 65470..66417 | + | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| CSC24_RS01590 () | 66417..68159 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| CSC24_RS01595 () | 68156..69433 | + | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| CSC24_RS01600 () | 69515..71716 | + | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| CSC24_RS01615 () | 72242..72928 | + | 687 | Protein_81 | IS1 family transposase IS1S | Transposase |
| CSC24_RS01625 () | 73182..74204 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| CSC24_RS01630 () | 74189..75754 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| CSC24_RS01635 () | 75829..76245 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CSC24_RS01640 () | 76242..76472 | - | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CSC24_RS01650 () | 77032..77250 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CSC24_RS01655 () | 77252..77557 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CSC24_RS01660 () | 77558..78364 | + | 807 | WP_000016970.1 | site-specific integrase | - |
| CSC24_RS01665 () | 79086..79841 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| CSC24_RS01670 () | 80429..81595 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| CSC24_RS01675 () | 81595..82566 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CSC24_RS01685 () | 83304..84206 | + | 903 | WP_064766247.1 | DUF1281 domain-containing protein | - |
| CSC24_RS01690 () | 84210..84514 | + | 305 | Protein_93 | hypothetical protein | - |
| CSC24_RS01695 () | 84591..85274 | + | 684 | WP_032181561.1 | DNA methylase | - |
| CSC24_RS01700 () | 85275..85496 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| CSC24_RS01705 () | 85510..85944 | + | 435 | WP_001546462.1 | DUF1380 family protein | - |
| CSC24_RS01710 () | 85989..86759 | + | 771 | WP_001006251.1 | hypothetical protein | - |
| CSC24_RS01720 () | 87296..87598 | + | 303 | WP_001666994.1 | antirestriction protein | - |
| CSC24_RS01725 () | 87645..88067 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| CSC24_RS26250 () | 88064..88234 | + | 171 | WP_086625069.1 | hypothetical protein | - |
| CSC24_RS01735 () | 88173..88949 | + | 777 | WP_086625070.1 | conjugal transfer pilus acetylase TraX | - |
| CSC24_RS01740 () | 89004..89564 | + | 561 | WP_000139363.1 | fertility inhibition protein FinO | - |
| CSC24_RS01745 () | 89698..89910 | + | 213 | WP_005012601.1 | hypothetical protein | - |
| CSC24_RS26255 () | 90211..90300 | - | 90 | Protein_104 | IS1 family transposase | - |
| CSC24_RS01760 () | 90355..91032 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CSC24_RS01765 () | 91032..91379 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CSC24_RS01770 () | 91399..92970 | + | 1572 | WP_023149734.1 | IS66 family transposase ISCro1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|