MGE detailed information
MGE type: Genomic_island MGE length: 19879 bp
Accession: NZ_CP028607 Location: 4918868..4938746 Organism: Escherichia coli strain 143 Replicon: chromosome
Accession: NZ_CP028607 Location: 4918868..4938746 Organism: Escherichia coli strain 143 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E67_RS25605 () | 4914062..4916212 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| C9E67_RS25610 () | 4916262..4916465 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| C9E67_RS25615 () | 4916476..4917432 | + | 957 | WP_001297640.1 | GTPase | - |
| C9E67_RS25620 () | 4917501..4918859 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| C9E67_RS25625 () | 4918868..4919152 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| C9E67_RS25630 () | 4919430..4921862 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| C9E67_RS25635 () | 4921929..4923398 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| C9E67_RS25640 () | 4923398..4925152 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4925302..4925378 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4925302..4925378 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4925302..4925378 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4925302..4925378 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4925302..4925378 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4925302..4925378 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4925302..4925378 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4925302..4925378 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| C9E67_RS25645 () | 4925373..4925714 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| C9E67_RS25650 () | 4925761..4926924 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| C9E67_RS25655 () | 4926972..4927853 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| C9E67_RS25660 () | 4927950..4928114 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| C9E67_RS25665 () | 4928291..4929703 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| C9E67_RS29500 () | 4929946..4930146 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| C9E67_RS25670 () | 4930151..4930903 | - | 753 | Protein_4891 | Recombination-promoting nuclease RpnD | VF |
| C9E67_RS25675 () | 4931370..4932602 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| C9E67_RS25680 () | 4932643..4933914 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| C9E67_RS25685 () | 4934030..4935181 | + | 1152 | WP_001302771.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| C9E67_RS25690 () | 4935191..4935958 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| C9E67_RS25695 () | 4935955..4936221 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| C9E67_RS25700 () | 4936533..4938746 | + | 2214 | WP_000535073.1 | hypothetical protein | VF |
| C9E67_RS25710 () | 4939012..4939854 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| C9E67_RS25715 () | 4939922..4941100 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.005 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.005 |