MGE detailed information
MGE type: Genomic_island MGE length: 68596 bp
Accession: NZ_CP028483 Location: 799584..868179 Organism: Escherichia coli strain E41-1 Replicon: chromosome
Accession: NZ_CP028483 Location: 799584..868179 Organism: Escherichia coli strain E41-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U19_RS04105 () | 795558..796094 | + | 537 | WP_000942771.1 | GspM family type II secretion system protein YghD | - |
| C2U19_RS04115 () | 797152..797928 | + | 777 | WP_000124287.1 | ABC transporter permease | - |
| C2U19_RS04120 () | 797925..798599 | + | 675 | WP_000590243.1 | ABC transporter ATP-binding protein | - |
| C2U19_RS04125 () | 798977..799133 | + | 157 | Protein_760 | transposase | - |
| C2U19_RS04130 () | 799584..800300 | + | 717 | WP_000634338.1 | hypothetical protein | - |
| C2U19_RS04135 () | 800735..802423 | + | 1689 | WP_022645101.1 | hypothetical protein | VF |
| C2U19_RS04140 () | 802520..803554 | - | 1035 | Protein_763 | IS481 family transposase | - |
| C2U19_RS04145 () | 803715..805277 | + | 1563 | WP_001305085.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| C2U19_RS04150 () | 805319..806497 | + | 1179 | WP_001305084.1 | UDP-N-acetyl-D-mannosamine dehydrogenase | VF |
| C2U19_RS04155 () | 806836..808005 | - | 1170 | WP_001161856.1 | hypothetical protein | VF |
| C2U19_RS04160 () | 808040..810067 | - | 2028 | WP_000579513.1 | hypothetical protein | VF |
| C2U19_RS04165 () | 810064..810804 | - | 741 | WP_000030749.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| C2U19_RS04170 () | 810814..812490 | - | 1677 | WP_001305083.1 | hypothetical protein | VF |
| C2U19_RS04175 () | 812514..813662 | - | 1149 | WP_000905920.1 | hypothetical protein | VF |
| C2U19_RS04180 () | 813734..814717 | - | 984 | WP_001296394.1 | Inosine-5'-monophosphate dehydrogenase | VF |
| C2U19_RS27920 () | 815528..815683 | - | 156 | WP_000729638.1 | IS110 family transposase ISEc32 | Transposase |
| C2U19_RS04190 () | 816115..817048 | - | 934 | Protein_773 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| C2U19_RS04195 () | 817041..817436 | - | 396 | WP_000208384.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| C2U19_RS04200 () | 817505..818350 | - | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| C2U19_RS04205 () | 818435..818632 | - | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| C2U19_RS04210 () | 818649..819137 | - | 489 | WP_000761699.1 | hypothetical protein | - |
| C2U19_RS04215 () | 819134..819511 | - | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| C2U19_RS04220 () | 819600..819968 | - | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C2U19_RS04225 () | 820018..820662 | - | 645 | WP_000094916.1 | hypothetical protein | - |
| C2U19_RS04230 () | 820681..820902 | - | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| C2U19_RS04235 () | 820965..821441 | - | 477 | WP_001186726.1 | RadC family protein | - |
| C2U19_RS04240 () | 821457..821942 | - | 486 | WP_000849565.1 | antirestriction protein | - |
| C2U19_RS04245 () | 821997..822814 | - | 818 | Protein_784 | DUF932 domain-containing protein | - |
| C2U19_RS04255 () | 822915..823148 | - | 234 | WP_000902034.1 | DUF905 family protein | - |
| C2U19_RS04260 () | 823227..823682 | - | 456 | WP_000581502.1 | hypothetical protein | - |
| C2U19_RS04265 () | 823758..824885 | - | 1128 | Protein_787 | hypothetical protein | - |
| C2U19_RS04270 () | 824980..828102 | - | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| C2U19_RS04275 () | 828437..829309 | - | 873 | WP_001069668.1 | GTPase family protein | - |
| C2U19_RS04290 () | 830641..832131 | + | 1491 | WP_001305029.1 | DUF3987 domain-containing protein | - |
| C2U19_RS04295 () | 832252..832824 | - | 573 | WP_001296389.1 | hypothetical protein | - |
| C2U19_RS27925 () | 832910..833116 | - | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| C2U19_RS04310 () | 834063..834212 | + | 150 | WP_071528377.1 | hemolysin activation protein | - |
| C2U19_RS04320 () | 834545..834742 | - | 198 | WP_001547002.1 | hypothetical protein | - |
| C2U19_RS04325 () | 834941..835510 | + | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| C2U19_RS04330 () | 835677..836060 | + | 384 | WP_000271011.1 | hypothetical protein | - |
| C2U19_RS04335 () | 836057..836242 | + | 186 | Protein_797 | zinc-ribbon domain-containing protein | - |
| C2U19_RS04340 () | 836281..837819 | - | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| C2U19_RS04345 () | 837819..838916 | - | 1098 | Protein_799 | IS66 family transposase IS682 | Transposase |
| C2U19_RS04350 () | 838947..839297 | - | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| C2U19_RS04355 () | 839294..839719 | - | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| C2U19_RS04365 () | 840091..840228 | - | 138 | WP_085949591.1 | transposase domain-containing protein | - |
| C2U19_RS04370 () | 840380..841297 | + | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| C2U19_RS04375 () | 841331..842206 | + | 876 | WP_110204451.1 | N-acetylmannosamine kinase | - |
| C2U19_RS04380 () | 842255..843727 | + | 1473 | WP_000376547.1 | MFS transporter | - |
| C2U19_RS04385 () | 843731..844561 | + | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| C2U19_RS04390 () | 844607..845317 | + | 711 | WP_001296386.1 | N-acetylneuraminic acid channel protein | - |
| C2U19_RS04395 () | 845330..846439 | + | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| C2U19_RS04400 () | 846489..847424 | + | 936 | WP_001305022.1 | alpha/beta hydrolase | - |
| C2U19_RS04405 () | 847460..848194 | - | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| C2U19_RS04410 () | 848294..849280 | + | 987 | WP_000274668.1 | hypothetical protein | - |
| C2U19_RS04415 () | 849432..850660 | + | 1229 | WP_096928816.1 | IS3 family transposase IS2 | Transposase |
| C2U19_RS04430 () | 851160..853250 | + | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| C2U19_RS04435 () | 853468..853627 | - | 160 | Protein_814 | transposase domain-containing protein | - |
| C2U19_RS04440 () | 854112..854354 | + | 243 | WP_001296383.1 | hypothetical protein | - |
| C2U19_RS04450 () | 854645..855004 | + | 360 | WP_001296382.1 | hypothetical protein | - |
| C2U19_RS04455 () | 855008..855223 | + | 216 | WP_000266542.1 | hypothetical protein | - |
| C2U19_RS04465 () | 855801..856123 | - | 323 | Protein_818 | transposase | - |
| C2U19_RS04470 () | 856143..856652 | + | 510 | Protein_819 | L-lactate permease | - |
| C2U19_RS04475 () | 856686..858218 | - | 1533 | Protein_820 | IS3 family transposase | - |
| C2U19_RS04485 () | 858542..858967 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| C2U19_RS04490 () | 858964..859314 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| C2U19_RS04495 () | 859345..860958 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| C2U19_RS04500 () | 861174..861596 | - | 423 | Protein_824 | hypothetical protein | - |
| C2U19_RS04505 () | 861641..862531 | - | 891 | Protein_825 | IS3 family transposase ISSd1 | Transposase |
| C2U19_RS04510 () | 862544..863695 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| C2U19_RS04515 () | 863760..864020 | - | 261 | Protein_827 | IS3 family transposase ISSfl10 | Transposase |
| C2U19_RS04520 () | 864292..868179 | - | 3888 | WP_001034083.1 | hypothetical protein | VF |
| C2U19_RS28175 () | 868429..868572 | + | 144 | WP_011076574.1 | hypothetical protein | - |
| C2U19_RS04530 () | 869123..871324 | - | 2202 | WP_000973516.1 | ferric aerobactin receptor IutA | - |
| C2U19_RS04535 () | 871406..872683 | - | 1278 | WP_000750130.1 | NADPH-dependent L-lysine N(6)-monooxygenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|