MGE detailed information
MGE type: Genomic_island MGE length: 61720 bp
Accession: NZ_CP028166 Location: 3653842..3715561 Organism: Escherichia coli strain CFSAN064036 Replicon: chromosome
Accession: NZ_CP028166 Location: 3653842..3715561 Organism: Escherichia coli strain CFSAN064036 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6668_RS19050 () | 3650249..3650968 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| C6668_RS19055 () | 3650965..3652596 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| C6668_RS19060 () | 3652777..3653007 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| C6668_RS19065 () | 3653019..3653291 | + | 273 | WP_000405651.1 | N-acetyltransferase | - |
| C6668_RS19075 () | 3653518..3653814 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| C6668_RS19080 () | 3653842..3654015 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| C6668_RS19085 () | 3654134..3655651 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| C6668_RS19090 () | 3655888..3657345 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| C6668_RS19095 () | 3657404..3659551 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| C6668_RS19100 () | 3659631..3660965 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| C6668_RS19105 () | 3661330..3662868 | - | 1539 | WP_104774451.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| C6668_RS19115 () | 3663751..3664077 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6668_RS19120 () | 3664074..3664337 | - | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| C6668_RS19125 () | 3664409..3665275 | - | 867 | WP_107148080.1 | DUF4942 domain-containing protein | - |
| C6668_RS19130 () | 3665372..3665569 | - | 198 | WP_000839266.1 | DUF957 domain-containing protein | - |
| C6668_RS19135 () | 3665587..3666075 | - | 489 | WP_000761680.1 | hypothetical protein | - |
| C6668_RS19140 () | 3666072..3666449 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| C6668_RS19145 () | 3666496..3666870 | - | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C6668_RS19150 () | 3666950..3667171 | - | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| C6668_RS19155 () | 3667234..3667710 | - | 477 | WP_001366855.1 | RadC family protein | - |
| C6668_RS19160 () | 3667726..3668205 | - | 480 | WP_000844100.1 | antirestriction protein | - |
| C6668_RS19165 () | 3668287..3669105 | - | 819 | WP_001175148.1 | DUF945 domain-containing protein | - |
| C6668_RS19170 () | 3669195..3669428 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| C6668_RS19175 () | 3669434..3670111 | - | 678 | WP_001097302.1 | hypothetical protein | - |
| C6668_RS19180 () | 3670259..3670939 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| C6668_RS19185 () | 3671142..3672026 | - | 885 | WP_000010402.1 | 50S ribosome-binding GTPase | - |
| C6668_RS19190 () | 3672211..3673341 | + | 1131 | WP_000147748.1 | hypothetical protein | - |
| C6668_RS26265 () | 3674549..3674722 | - | 174 | WP_157916789.1 | hypothetical protein | - |
| C6668_RS19195 () | 3674903..3675634 | + | 732 | WP_039023502.1 | inovirus Gp2 family protein | - |
| C6668_RS26430 () | 3675854..3676003 | - | 150 | WP_001385640.1 | hypothetical protein | - |
| C6668_RS26270 () | 3676018..3676590 | + | 573 | WP_000991606.1 | hypothetical protein | - |
| C6668_RS19205 () | 3676659..3676892 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| C6668_RS19215 () | 3677160..3677660 | + | 501 | WP_032216520.1 | hypothetical protein | - |
| C6668_RS19220 () | 3677749..3678372 | + | 624 | WP_032216521.1 | hypothetical protein | - |
| C6668_RS19230 () | 3679802..3679971 | - | 170 | Protein_3520 | IS3 family transposase | - |
| C6668_RS19235 () | 3680038..3681054 | + | 1017 | Protein_3521 | IS110 family transposase | - |
| C6668_RS26275 () | 3681484..3682071 | - | 588 | WP_157903028.1 | Adhesin YadA | VF |
| C6668_RS19245 () | 3682953..3683590 | + | 638 | Protein_3523 | IS3 family transposase IS2 | Transposase |
| C6668_RS19250 () | 3683567..3683815 | - | 249 | Protein_3524 | IS3 family transposase IS2 | Transposase |
| C6668_RS19260 () | 3684023..3684324 | - | 302 | Protein_3525 | IS3 family transposase ISEc31 | Transposase |
| C6668_RS19265 () | 3684356..3684905 | - | 550 | Protein_3526 | transposase | - |
| C6668_RS19270 () | 3685137..3688082 | + | 2946 | WP_107148081.1 | hypothetical protein | - |
| C6668_RS19275 () | 3688807..3689768 | + | 962 | Protein_3528 | IS630 family transposase ISSpu2 | Transposase |
| C6668_RS19280 () | 3689797..3690231 | - | 435 | WP_000073819.1 | hypothetical protein | - |
| C6668_RS19285 () | 3690272..3690478 | - | 207 | WP_029396424.1 | hypothetical protein | - |
| C6668_RS19295 () | 3690520..3691217 | + | 698 | Protein_3531 | IS1 family transposase IS1R | Transposase |
| C6668_RS19300 () | 3691443..3692045 | + | 603 | WP_001204062.1 | hypothetical protein | - |
| C6668_RS19305 () | 3692055..3693038 | + | 984 | WP_000074845.1 | DUF4868 domain-containing protein | - |
| C6668_RS19310 () | 3693125..3693615 | + | 491 | Protein_3534 | IS3 family transposase | - |
| C6668_RS19315 () | 3693758..3694381 | + | 624 | WP_001470157.1 | hypothetical protein | - |
| C6668_RS19320 () | 3694709..3695185 | - | 477 | WP_077632214.1 | DDE-type integrase/transposase/recombinase | - |
| C6668_RS19330 () | 3696847..3697088 | - | 242 | Protein_3538 | transposase | - |
| C6668_RS19340 () | 3697404..3697838 | + | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| C6668_RS19345 () | 3697835..3698185 | + | 351 | WP_000624688.1 | IS66 family transposase ISEc47 | Transposase |
| C6668_RS19350 () | 3698216..3699829 | + | 1614 | WP_000080172.1 | IS66 family transposase ISEc43 | Transposase |
| C6668_RS19355 () | 3700077..3700277 | + | 201 | WP_012311738.1 | hypothetical protein | - |
| C6668_RS19360 () | 3700367..3700753 | + | 387 | WP_001342709.1 | hypothetical protein | - |
| C6668_RS19365 () | 3700811..3701845 | - | 1035 | WP_000774671.1 | virulence RhuM family protein | - |
| C6668_RS19370 () | 3701881..3702720 | - | 840 | WP_000350135.1 | hypothetical protein | - |
| C6668_RS19375 () | 3702723..3703277 | - | 555 | WP_001090220.1 | hypothetical protein | - |
| C6668_RS19380 () | 3703277..3706513 | - | 3237 | WP_000718842.1 | type I restriction endonuclease subunit R | - |
| C6668_RS19385 () | 3706513..3707799 | - | 1287 | WP_000991122.1 | restriction endonuclease subunit S | - |
| C6668_RS19390 () | 3707799..3709778 | - | 1980 | WP_001053122.1 | type I restriction-modification system subunit M | - |
| C6668_RS19395 () | 3709846..3710343 | - | 498 | WP_000648433.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| C6668_RS19400 () | 3710616..3711313 | + | 698 | Protein_3551 | IS1 family transposase | - |
| C6668_RS19405 () | 3711330..3711506 | - | 177 | Protein_3552 | integrase | - |
| C6668_RS19410 () | 3711735..3712481 | + | 747 | WP_001385633.1 | porin family protein | - |
| C6668_RS19415 () | 3712656..3714158 | + | 1503 | WP_021547790.1 | phosphoethanolamine transferase | - |
| C6668_RS19425 () | 3714518..3715561 | - | 1044 | WP_000999868.1 | hypothetical protein | - |
| C6668_RS19430 () | 3715994..3717184 | - | 1191 | WP_107148084.1 | tyrosine-type recombinase/integrase | - |
| C6668_RS19440 () | 3717543..3718118 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| C6668_RS19445 () | 3718155..3719852 | - | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| C6668_RS19450 () | 3719828..3720166 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|