MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 74503 bp
Accession: NZ_CP028166 Location: 1934368..2008870 Organism: Escherichia coli strain CFSAN064036 Replicon: chromosome
Accession: NZ_CP028166 Location: 1934368..2008870 Organism: Escherichia coli strain CFSAN064036 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6668_RS26205 () | 1930377..1930496 | - | 120 | WP_072008015.1 | ATPase | - |
| C6668_RS10165 () | 1930651..1930869 | - | 219 | WP_071524906.1 | recombinase family protein | - |
| C6668_RS26210 () | 1931224..1932597 | - | 1374 | Protein_1875 | DUF5507 domain-containing protein | - |
| C6668_RS10180 () | 1932796..1933493 | - | 698 | Protein_1876 | IS1 family transposase | - |
| C6668_RS10190 () | 1933889..1934173 | - | 285 | WP_001347906.1 | hypothetical protein | - |
| C6668_RS10195 () | 1934368..1935684 | + | 1317 | WP_000290292.1 | hypothetical protein ; Integrase | Integrase |
| C6668_RS10200 () | 1935814..1936410 | + | 597 | WP_000268405.1 | hypothetical protein | - |
| C6668_RS10205 () | 1936492..1938096 | - | 1605 | WP_107147953.1 | hypothetical protein | - |
| C6668_RS10210 () | 1938875..1939102 | + | 228 | WP_000265817.1 | AlpA family phage regulatory protein | - |
| C6668_RS10215 () | 1939165..1939911 | + | 747 | WP_107147954.1 | hypothetical protein | - |
| C6668_RS10220 () | 1940193..1940693 | + | 501 | WP_001428286.1 | hypothetical protein | - |
| C6668_RS10225 () | 1941081..1941695 | + | 615 | WP_000628302.1 | inovirus Gp2 family protein | - |
| C6668_RS10230 () | 1941789..1942289 | + | 501 | WP_191640715.1 | inovirus-type Gp2 protein | - |
| C6668_RS10235 () | 1942635..1943336 | + | 702 | WP_106424070.1 | hypothetical protein | - |
| C6668_RS10240 () | 1943412..1943675 | - | 264 | WP_000657153.1 | DUF4222 domain-containing protein | - |
| C6668_RS10245 () | 1944233..1945885 | + | 1653 | WP_097594126.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| C6668_RS10250 () | 1945895..1946422 | + | 528 | WP_107147956.1 | hypothetical protein | VF |
| C6668_RS10255 () | 1946438..1955677 | + | 9240 | WP_107147957.1 | hypothetical protein | VF |
| C6668_RS10260 () | 1955677..1956012 | + | 336 | WP_107147958.1 | hypothetical protein | - |
| C6668_RS10265 () | 1956328..1957632 | - | 1305 | Protein_1892 | IS66 family transposase ISEc43 | Transposase |
| C6668_RS10275 () | 1957718..1958740 | + | 1023 | WP_107147959.1 | IS21 family transposase IS100kyp | Transposase |
| C6668_RS10280 () | 1958737..1959519 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| C6668_RS10285 () | 1959586..1959900 | - | 315 | Protein_1895 | IS66 family transposase ISEc47 | Transposase |
| C6668_RS10290 () | 1959931..1960281 | - | 351 | WP_000624723.1 | IS66 family transposase ISEc47 | Transposase |
| C6668_RS10295 () | 1960278..1960703 | - | 426 | WP_107147960.1 | IS66 family transposase ISEc23 | Transposase |
| C6668_RS10300 () | 1960880..1961284 | + | 405 | WP_113281736.1 | alpha/beta hydrolase | - |
| C6668_RS10305 () | 1961374..1962462 | - | 1089 | WP_000899683.1 | hypothetical protein | - |
| C6668_RS10310 () | 1962462..1964252 | - | 1791 | WP_086218821.1 | restriction system-associated AAA family ATPase | - |
| C6668_RS10315 () | 1964249..1965802 | - | 1554 | WP_000871034.1 | restriction endonuclease subunit S | - |
| C6668_RS10320 () | 1965799..1967463 | - | 1665 | WP_107147961.1 | type I restriction-modification system subunit M | - |
| C6668_RS10325 () | 1967478..1970276 | - | 2799 | WP_107147962.1 | DEAD/DEAH box helicase family protein | - |
| C6668_RS10330 () | 1970886..1971584 | + | 699 | WP_107147963.1 | TIGR03761 family integrating conjugative element protein | - |
| C6668_RS10335 () | 1971574..1972068 | + | 495 | WP_000981778.1 | DUF3158 family protein | - |
| C6668_RS10345 () | 1972756..1973172 | + | 417 | WP_001291903.1 | DUF3577 domain-containing protein | - |
| C6668_RS10350 () | 1973293..1973757 | + | 465 | WP_000101250.1 | hypothetical protein | VF |
| C6668_RS10355 () | 1973750..1974358 | + | 609 | WP_088550861.1 | hypothetical protein | - |
| C6668_RS10360 () | 1974365..1975015 | + | 651 | WP_000336898.1 | TIGR03759 family integrating conjugative element protein | - |
| C6668_RS10365 () | 1974991..1975524 | + | 534 | WP_000168347.1 | hypothetical protein | VF |
| C6668_RS10370 () | 1975521..1975928 | + | 408 | WP_000683400.1 | integrating conjugative element protein | - |
| C6668_RS10375 () | 1975925..1977957 | + | 2033 | Protein_1912 | type IV conjugative transfer system coupling protein TraD | - |
| C6668_RS10380 () | 1977920..1978186 | + | 267 | WP_096925806.1 | hypothetical protein | - |
| C6668_RS10385 () | 1978186..1978869 | + | 684 | WP_107147964.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| C6668_RS26390 () | 1978888..1979850 | + | 963 | WP_191640789.1 | hypothetical protein | - |
| C6668_RS10395 () | 1980062..1980346 | + | 285 | WP_001486381.1 | hypothetical protein | - |
| C6668_RS10415 () | 1982462..1982932 | - | 471 | WP_024167427.1 | Mov34/MPN/PAD-1 family protein | - |
| C6668_RS10420 () | 1982919..1984688 | - | 1770 | WP_000390952.1 | ThiF family adenylyltransferase | - |
| C6668_RS10425 () | 1984688..1985986 | - | 1299 | WP_000558641.1 | hypothetical protein | - |
| C6668_RS10430 () | 1985986..1987056 | - | 1071 | WP_001286317.1 | cGAMP-activated phospholipase CapV | - |
| C6668_RS10435 () | 1987563..1987901 | + | 339 | Protein_1922 | ISL3 family transposase | - |
| C6668_RS10440 () | 1987988..1988413 | + | 426 | WP_097464767.1 | IS66 family transposase IS682 | Transposase |
| C6668_RS26540 () | 1988410..1988484 | + | 75 | Protein_1924 | IS66 family transposase IS682 | Transposase |
| C6668_RS10450 () | 1988617..1989588 | + | 972 | WP_107147965.1 | IS481 family transposase ISEc18 | Transposase |
| C6668_RS10455 () | 1989739..1989921 | - | 183 | WP_000282125.1 | hypothetical protein | - |
| C6668_RS10460 () | 1990252..1991124 | + | 873 | WP_107147966.1 | GTPase family protein | - |
| C6668_RS10465 () | 1991496..1994342 | + | 2847 | WP_107147967.1 | Ag43/Cah family autotransporter adhesin | - |
| C6668_RS10470 () | 1994453..1996846 | + | 2394 | WP_107147968.1 | dynamin family protein | - |
| C6668_RS10475 () | 1996843..1997748 | + | 906 | WP_000203562.1 | chemotaxis protein | - |
| C6668_RS10480 () | 1997745..1998815 | + | 1071 | WP_107147969.1 | patatin-like phospholipase family protein | - |
| C6668_RS10485 () | 1998950..1999156 | + | 207 | WP_107147970.1 | hypothetical protein | - |
| C6668_RS10490 () | 1999232..1999456 | + | 225 | WP_000459736.1 | hypothetical protein | - |
| C6668_RS10495 () | 1999643..1999882 | + | 240 | WP_001255978.1 | hypothetical protein | - |
| C6668_RS10500 () | 1999901..2000383 | + | 483 | WP_107147971.1 | hypothetical protein | - |
| C6668_RS10515 () | 2000742..2001560 | + | 819 | WP_001234708.1 | DUF945 domain-containing protein | - |
| C6668_RS26215 () | 2001893..2002594 | - | 702 | WP_137432245.1 | hypothetical protein | - |
| C6668_RS10525 () | 2002987..2003451 | + | 465 | WP_107147972.1 | antirestriction protein | - |
| C6668_RS10530 () | 2003467..2003943 | + | 477 | WP_001186774.1 | RadC family protein | - |
| C6668_RS10535 () | 2004012..2004614 | + | 603 | WP_107147973.1 | antitoxin of toxin-antitoxin stability system | - |
| C6668_RS10540 () | 2004664..2005032 | + | 369 | WP_063104706.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C6668_RS10545 () | 2005122..2005499 | + | 378 | WP_000854744.1 | TA system toxin CbtA family protein | Toxin Detail |
| C6668_RS10550 () | 2005496..2005984 | + | 489 | WP_107147974.1 | hypothetical protein | - |
| C6668_RS10555 () | 2005996..2006193 | + | 198 | WP_000772034.1 | DUF957 domain-containing protein | - |
| C6668_RS10560 () | 2006278..2007123 | + | 846 | WP_000065753.1 | DUF4942 domain-containing protein | - |
| C6668_RS10565 () | 2007449..2008870 | + | 1422 | WP_080153494.1 | hypothetical protein ; Integrase | Integrase |
| C6668_RS10570 () | 2008867..2009667 | + | 801 | WP_107147975.1 | hypothetical protein | - |
| C6668_RS10575 () | 2009809..2009997 | + | 189 | WP_094322896.1 | helix-turn-helix domain-containing protein | - |
| C6668_RS10580 () | 2010008..2010211 | + | 204 | WP_016231468.1 | AlpA family phage regulatory protein | - |
| C6668_RS10585 () | 2010220..2010882 | + | 663 | WP_097346161.1 | host cell division inhibitor Icd-like protein | - |
| C6668_RS10590 () | 2010875..2011195 | + | 321 | WP_107147976.1 | hypothetical protein | - |
| C6668_RS10595 () | 2011202..2011501 | + | 300 | WP_001261487.1 | DUF4222 domain-containing protein | - |
| C6668_RS10600 () | 2011498..2013621 | + | 2124 | WP_107147977.1 | DUF927 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|