MGE detailed information
MGE type: Prophage MGE length: 53246 bp
Accession: NZ_CP028126 Location: 1916063..1969308 Organism: Escherichia coli O26 str. RM10386 Replicon: chromosome
Accession: NZ_CP028126 Location: 1916063..1969308 Organism: Escherichia coli O26 str. RM10386 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I3U_RS11920 () | 1911569..1913095 | - | 1527 | WP_000062967.1 | p-aminobenzoyl-glutamate transporter | - |
| I3U_RS11930 () | 1913132..1914577 | - | 1446 | WP_001156471.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| I3U_RS11935 () | 1914577..1915887 | - | 1311 | WP_000444947.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| I3U_RS11940 () | 1916063..1916971 | + | 909 | WP_000885467.1 | LysR family transcriptional regulator | - |
| I3U_RS11945 () | 1917301..1917864 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| I3U_RS11950 () | 1917885..1919117 | - | 1233 | WP_000628065.1 | diguanylate cyclase DgcM | - |
| I3U_RS33525 () | 1919311..1919358 | + | 48 | WP_211180494.1 | protein YnaN | - |
| I3U_RS11955 () | 1919372..1920355 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| I3U_RS11965 () | 1920833..1922206 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| I3U_RS11970 () | 1922335..1923270 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| I3U_RS11975 () | 1923322..1924557 | - | 1236 | WP_000040851.1 | Putative defective protein IntQ ; Integrase | Integrase |
| I3U_RS11980 () | 1924559..1924774 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| I3U_RS11985 () | 1924874..1925062 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 1924878..1925056 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1924878..1925056 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1924878..1925056 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1924878..1925056 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| I3U_RS11990 () | 1925100..1925249 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| I3U_RS11995 () | 1925305..1926114 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| I3U_RS12000 () | 1926107..1928707 | - | 2601 | WP_000105151.1 | exodeoxyribonuclease VIII | - |
| I3U_RS12005 () | 1928809..1929084 | - | 276 | WP_000632297.1 | protein RacC | - |
| I3U_RS12010 () | 1929159..1929329 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| I3U_RS12015 () | 1929329..1929550 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| I3U_RS12020 () | 1929971..1930123 | - | 153 | WP_001427316.1 | DUF1391 family protein | - |
| I3U_RS12030 () | 1930422..1930841 | - | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| I3U_RS12035 () | 1930921..1931175 | + | 255 | WP_001072343.1 | hypothetical protein | - |
| I3U_RS12040 () | 1931172..1931594 | + | 423 | WP_000693802.1 | hypothetical protein | - |
| I3U_RS12045 () | 1931658..1932137 | + | 480 | WP_001432368.1 | YdaU family protein | - |
| I3U_RS12055 () | 1933409..1933777 | + | 369 | Protein_1995 | DUF1376 domain-containing protein | - |
| I3U_RS12060 () | 1933784..1934530 | + | 747 | WP_000788968.1 | ATP-binding protein | - |
| I3U_RS12065 () | 1934553..1935314 | + | 762 | WP_000450672.1 | DUF1627 domain-containing protein | - |
| I3U_RS12070 () | 1935330..1935752 | + | 423 | WP_001151124.1 | DUF977 family protein | - |
| I3U_RS12075 () | 1935749..1936045 | + | 297 | WP_001266134.1 | DUF4406 domain-containing protein | - |
| I3U_RS12080 () | 1936042..1936503 | + | 462 | WP_001209480.1 | ead/Ea22-like family protein | - |
| I3U_RS12085 () | 1936481..1936837 | + | 357 | WP_000403777.1 | hypothetical protein | - |
| I3U_RS12090 () | 1936888..1937100 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| I3U_RS12095 () | 1937133..1937350 | + | 218 | Protein_2003 | DUF4014 family protein | - |
| I3U_RS12100 () | 1937352..1937615 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| I3U_RS12105 () | 1937626..1938495 | + | 870 | WP_000207986.1 | DUF551 domain-containing protein | - |
| I3U_RS12110 () | 1938611..1938715 | + | 105 | WP_001278454.1 | hypothetical protein | - |
| I3U_RS12120 () | 1938962..1939117 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I3U_RS12130 () | 1939285..1939563 | + | 279 | WP_001341382.1 | hypothetical protein | - |
| I3U_RS12135 () | 1939565..1940614 | + | 1050 | WP_001265080.1 | DUF968 domain-containing protein | - |
| I3U_RS12140 () | 1940627..1941001 | + | 375 | WP_001217413.1 | RusA family crossover junction endodeoxyribonuclease | - |
| I3U_RS12145 () | 1940998..1941819 | + | 822 | WP_000762928.1 | antitermination protein | - |
| I3U_RS12150 () | 1942057..1942419 | + | 363 | Protein_2012 | tellurite resistance TerB family protein | - |
| I3U_RS12155 () | 1942416..1942668 | + | 253 | Protein_2013 | DUF3927 family protein | - |
| I3U_RS12160 () | 1942990..1944840 | + | 1851 | WP_000143049.1 | SASA family carbohydrate esterase | - |
| I3U_RS12170 () | 1945279..1945494 | + | 216 | WP_024164617.1 | class II holin family protein | - |
| I3U_RS12175 () | 1945494..1945991 | + | 498 | WP_000075132.1 | lysozyme RrrD | - |
| I3U_RS12180 () | 1945988..1946425 | + | 438 | WP_000092325.1 | lysis protein | - |
| I3U_RS12185 () | 1946575..1947192 | + | 618 | WP_000881326.1 | Rha family transcriptional regulator | - |
| I3U_RS12195 () | 1947380..1947574 | - | 195 | WP_001307652.1 | YlcI/YnfO family protein | - |
| I3U_RS12205 () | 1947963..1948508 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| I3U_RS12210 () | 1948483..1950408 | + | 1926 | WP_001027379.1 | phage terminase large subunit family protein | - |
| I3U_RS12215 () | 1950405..1950611 | + | 207 | WP_000198153.1 | gpW family protein | - |
| I3U_RS12220 () | 1950604..1952208 | + | 1605 | WP_109041959.1 | phage portal protein | - |
| I3U_RS12225 () | 1952189..1953508 | + | 1320 | WP_000123251.1 | S49 family peptidase | - |
| I3U_RS12230 () | 1953518..1953850 | + | 333 | WP_001365129.1 | head decoration protein | - |
| I3U_RS12235 () | 1953906..1954931 | + | 1026 | WP_000063258.1 | major capsid protein | - |
| I3U_RS12240 () | 1954973..1955368 | + | 396 | WP_000158897.1 | DNA-packaging protein FI | - |
| I3U_RS12245 () | 1955380..1955733 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| I3U_RS12250 () | 1955745..1956323 | + | 579 | WP_032358209.1 | phage tail protein | - |
| I3U_RS12255 () | 1956320..1956715 | + | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| I3U_RS12260 () | 1956723..1957475 | + | 753 | WP_000235067.1 | Ig domain-containing protein | - |
| I3U_RS12265 () | 1957489..1957920 | + | 432 | WP_000479086.1 | phage minor tail protein G | - |
| I3U_RS12270 () | 1957947..1958360 | + | 414 | WP_000533431.1 | phage tail assembly protein T | - |
| I3U_RS12275 () | 1958341..1960919 | + | 2579 | Protein_2034 | phage tail tape measure protein | - |
| I3U_RS12280 () | 1960916..1961245 | + | 330 | WP_000847304.1 | phage tail protein | - |
| I3U_RS12285 () | 1961245..1961943 | + | 699 | WP_001375577.1 | phage minor tail protein L | - |
| I3U_RS12290 () | 1961949..1962692 | + | 744 | WP_001375575.1 | C40 family peptidase | - |
| I3U_RS12295 () | 1962638..1963270 | + | 633 | WP_122993493.1 | tail assembly protein | - |
| I3U_RS12300 () | 1963516..1966992 | + | 3477 | WP_106875083.1 | host specificity protein J | - |
| I3U_RS12305 () | 1967060..1967659 | + | 600 | WP_001233130.1 | Outer membrane protein X | VF |
| I3U_RS12310 () | 1967724..1969037 | + | 1314 | WP_000279018.1 | ISNCY family transposase KIS | Transposase |
| I3U_RS12315 () | 1969039..1969308 | + | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| I3U_RS12320 () | 1969421..1969996 | + | 576 | WP_001131657.1 | DUF1076 domain-containing protein | - |
| I3U_RS12325 () | 1970069..1970698 | + | 630 | WP_001443810.1 | DUF1076 domain-containing protein | - |
| I3U_RS12330 () | 1970780..1971421 | + | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| I3U_RS12340 () | 1972362..1972796 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| I3U_RS12345 () | 1972937..1974070 | - | 1134 | WP_000837943.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|