MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 171914 bp
Accession: NZ_CP027726 Location: 2206062..2377975 Organism: Pseudomonas orientalis strain R4-35-08 Replicon: chromosome
Accession: NZ_CP027726 Location: 2206062..2377975 Organism: Pseudomonas orientalis strain R4-35-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4J95_RS10075 () | 2201490..2201921 | + | 432 | WP_124357886.1 | GNAT family N-acetyltransferase | - |
| C4J95_RS10080 () | 2201957..2202196 | - | 240 | WP_124357887.1 | DNA-binding protein | - |
| C4J95_RS10085 () | 2202279..2202644 | + | 366 | WP_082632077.1 | helix-turn-helix domain-containing protein | - |
| C4J95_RS10090 () | 2202797..2203438 | + | 642 | WP_017530522.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| C4J95_RS10095 () | 2203440..2205263 | + | 1824 | WP_124357888.1 | excinuclease ABC subunit UvrC | - |
| C4J95_RS10100 () | 2205296..2205856 | + | 561 | WP_003190391.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| C4J95_RS10110 () | 2206225..2207565 | + | 1341 | WP_124357889.1 | Prophage integrase IntA ; Integrase | Integrase |
| C4J95_RS10115 () | 2207602..2208039 | - | 438 | WP_124357890.1 | hypothetical protein | - |
| C4J95_RS10120 () | 2208192..2208500 | - | 309 | WP_124357891.1 | hypothetical protein | - |
| C4J95_RS10125 () | 2208898..2209671 | + | 774 | WP_124357892.1 | phytanoyl-CoA dioxygenase family protein | - |
| C4J95_RS10130 () | 2209677..2210873 | + | 1197 | WP_124357893.1 | methyltransferase domain-containing protein | - |
| C4J95_RS10135 () | 2210870..2211712 | + | 843 | WP_124357894.1 | hypothetical protein | - |
| C4J95_RS10140 () | 2211789..2213438 | - | 1650 | WP_124360488.1 | helicase/relaxase domain-containing protein | - |
| C4J95_RS10145 () | 2213659..2214012 | + | 354 | WP_124357895.1 | DUF3742 family protein | - |
| C4J95_RS10150 () | 2214020..2215525 | - | 1506 | WP_124357896.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| C4J95_RS10155 () | 2215522..2215863 | - | 342 | WP_124357897.1 | hypothetical protein | - |
| C4J95_RS10160 () | 2215865..2217220 | - | 1356 | WP_124357898.1 | integrating conjugative element protein | - |
| C4J95_RS10165 () | 2217224..2218155 | - | 932 | Protein_1947 | TIGR03756 family integrating conjugative element protein | - |
| C4J95_RS10170 () | 2218289..2218588 | - | 300 | WP_124357899.1 | hypothetical protein | - |
| C4J95_RS10175 () | 2218877..2219134 | - | 258 | WP_124357900.1 | DUF1778 domain-containing protein | - |
| C4J95_RS10180 () | 2219183..2219686 | - | 504 | WP_124357901.1 | DNA repair protein RadC | - |
| C4J95_RS10185 () | 2220490..2222439 | + | 1950 | WP_164484893.1 | AAA family ATPase | - |
| C4J95_RS10190 () | 2222606..2222908 | - | 303 | WP_124357903.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C4J95_RS10195 () | 2222905..2223216 | - | 312 | WP_124357904.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| C4J95_RS10200 () | 2223282..2226110 | - | 2829 | WP_124357905.1 | conjugative transfer ATPase | - |
| C4J95_RS10205 () | 2226110..2226520 | - | 411 | WP_124357906.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| C4J95_RS10210 () | 2226501..2227883 | - | 1383 | WP_124357907.1 | TIGR03752 family integrating conjugative element protein | - |
| C4J95_RS10215 () | 2227873..2228712 | - | 840 | WP_124357908.1 | TIGR03749 family integrating conjugative element protein | - |
| C4J95_RS10220 () | 2228709..2229368 | - | 660 | WP_124357909.1 | TIGR03746 family integrating conjugative element protein | - |
| C4J95_RS10225 () | 2229365..2229757 | - | 393 | WP_124357910.1 | TIGR03750 family conjugal transfer protein | - |
| C4J95_RS10230 () | 2229768..2230139 | - | 372 | WP_124357911.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| C4J95_RS10235 () | 2230151..2230384 | - | 234 | WP_124360489.1 | TIGR03758 family integrating conjugative element protein | - |
| C4J95_RS10240 () | 2230377..2230715 | - | 339 | WP_124357912.1 | raqprd family integrative conjugative element protein | - |
| C4J95_RS10245 () | 2232313..2236182 | + | 3870 | WP_206431939.1 | RHS repeat protein | - |
| C4J95_RS10250 () | 2236169..2236546 | + | 378 | WP_124357914.1 | ankyrin repeat domain-containing protein | - |
| C4J95_RS10255 () | 2236727..2237470 | - | 744 | WP_124357915.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| C4J95_RS10260 () | 2237463..2239526 | - | 2064 | WP_124357916.1 | type IV conjugative transfer system coupling protein TraD | - |
| C4J95_RS10265 () | 2239528..2239944 | - | 417 | WP_124357917.1 | integrating conjugative element protein | - |
| C4J95_RS10270 () | 2239941..2240507 | - | 567 | WP_124357918.1 | hypothetical protein | VF |
| C4J95_RS10275 () | 2240492..2241235 | - | 744 | WP_124357919.1 | TIGR03759 family integrating conjugative element protein | - |
| C4J95_RS10280 () | 2241239..2241865 | - | 627 | WP_124357920.1 | hypothetical protein | - |
| C4J95_RS10285 () | 2241862..2242353 | - | 492 | WP_164484894.1 | hypothetical protein | VF |
| C4J95_RS10290 () | 2242505..2243146 | + | 642 | WP_124357922.1 | glycoside hydrolase family 25 protein | - |
| C4J95_RS10295 () | 2243212..2243685 | - | 474 | WP_124357923.1 | DUF3577 domain-containing protein | - |
| C4J95_RS10300 () | 2244029..2244748 | - | 720 | WP_124357924.1 | ABC transporter substrate-binding protein | - |
| C4J95_RS10305 () | 2244825..2245217 | - | 393 | WP_124357925.1 | hypothetical protein | - |
| C4J95_RS10310 () | 2245466..2246368 | - | 903 | WP_124357926.1 | hypothetical protein | - |
| C4J95_RS10315 () | 2246688..2246933 | + | 246 | WP_124357927.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| C4J95_RS10320 () | 2246926..2247216 | + | 291 | WP_124357928.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C4J95_RS10325 () | 2247221..2248501 | - | 1281 | WP_124357929.1 | DNA cytosine methyltransferase | - |
| C4J95_RS10330 () | 2248479..2248880 | - | 402 | WP_124357930.1 | single-stranded DNA-binding protein | - |
| C4J95_RS10335 () | 2248877..2249335 | - | 459 | WP_206431949.1 | DUF3158 family protein | - |
| C4J95_RS10340 () | 2249332..2250093 | - | 762 | WP_124357932.1 | TIGR03761 family integrating conjugative element protein | - |
| C4J95_RS10345 () | 2250270..2251409 | - | 1140 | WP_124357933.1 | hypothetical protein | - |
| C4J95_RS10350 () | 2251413..2251973 | - | 561 | WP_124357934.1 | DUF2857 domain-containing protein | - |
| C4J95_RS10355 () | 2251973..2253289 | - | 1317 | WP_124357935.1 | ParB N-terminal domain-containing protein | - |
| C4J95_RS10360 () | 2253282..2253485 | - | 204 | WP_124357936.1 | type II toxin-antitoxin system HicA family toxin | - |
| C4J95_RS10365 () | 2253475..2254326 | - | 852 | WP_124357937.1 | Chromosome partitioning protein ParA | VF |
| C4J95_RS10370 () | 2254339..2254554 | - | 216 | WP_124357938.1 | AlpA family transcriptional regulator | - |
| C4J95_RS10375 () | 2254668..2255402 | - | 735 | WP_124357939.1 | hypothetical protein | - |
| C4J95_RS10380 () | 2255707..2256141 | - | 435 | WP_124357940.1 | hypothetical protein | - |
| C4J95_RS10385 () | 2256391..2256810 | - | 420 | WP_124357941.1 | DUF3085 domain-containing protein | - |
| C4J95_RS27465 () | 2257047..2257619 | - | 573 | WP_206431959.1 | hypothetical protein | - |
| C4J95_RS10395 () | 2257815..2258495 | - | 681 | WP_124357942.1 | DUF1851 domain-containing protein | - |
| C4J95_RS10400 () | 2258492..2259817 | - | 1326 | WP_124357943.1 | hypothetical protein | - |
| C4J95_RS10405 () | 2259821..2260177 | - | 357 | WP_124357944.1 | DUF4150 domain-containing protein | - |
| C4J95_RS10410 () | 2260179..2261528 | - | 1350 | WP_124357945.1 | DUF2169 domain-containing protein | - |
| C4J95_RS10415 () | 2261538..2263550 | - | 2013 | WP_124357946.1 | Actin cross-linking toxin VgrG1 | VF |
| C4J95_RS10420 () | 2263576..2263833 | - | 258 | WP_043051816.1 | PAAR domain-containing protein | - |
| C4J95_RS10425 () | 2263910..2264431 | - | 522 | WP_124357947.1 | Major exported protein | VF |
| C4J95_RS10430 () | 2264537..2265262 | - | 726 | Protein_2000 | hypothetical protein | VF |
| C4J95_RS10435 () | 2265375..2266721 | - | 1347 | WP_124357948.1 | hypothetical protein | VF |
| C4J95_RS10440 () | 2266759..2268108 | - | 1350 | WP_124357949.1 | hypothetical protein | VF |
| C4J95_RS10445 () | 2268105..2269127 | - | 1023 | WP_124357950.1 | hypothetical protein | VF |
| C4J95_RS10450 () | 2269091..2270857 | - | 1767 | WP_124357951.1 | hypothetical protein | VF |
| C4J95_RS10455 () | 2270865..2271281 | - | 417 | WP_124357952.1 | hypothetical protein | VF |
| C4J95_RS10460 () | 2271282..2272760 | - | 1479 | WP_124357953.1 | hypothetical protein | VF |
| C4J95_RS10465 () | 2272791..2273294 | - | 504 | WP_124357954.1 | hypothetical protein | VF |
| C4J95_RS10470 () | 2273701..2274291 | + | 591 | WP_124357955.1 | hypothetical protein | VF |
| C4J95_RS10475 () | 2274279..2275715 | + | 1437 | WP_124357956.1 | type VI secretion system protein TssA | - |
| C4J95_RS10480 () | 2275725..2279366 | + | 3642 | WP_124357957.1 | hypothetical protein | VF |
| C4J95_RS10485 () | 2279419..2280741 | + | 1323 | WP_124357958.1 | hypothetical protein | - |
| C4J95_RS10490 () | 2281009..2281209 | - | 201 | WP_124357959.1 | hypothetical protein | - |
| C4J95_RS10495 () | 2281851..2283875 | + | 2025 | WP_124357960.1 | oligopeptidase A | - |
| C4J95_RS10500 () | 2283986..2289163 | + | 5178 | WP_124357961.1 | hypothetical protein | - |
| C4J95_RS10505 () | 2289342..2290556 | + | 1215 | WP_124357962.1 | Methyl-accepting chemotaxis protein McpA | VF |
| C4J95_RS10510 () | 2290566..2290934 | + | 369 | WP_043051381.1 | Chemotaxis protein CheY | VF |
| C4J95_RS10515 () | 2290958..2291245 | + | 288 | WP_124357963.1 | STAS domain-containing protein | - |
| C4J95_RS10520 () | 2291287..2293326 | + | 2040 | WP_124357964.1 | Chemotaxis protein CheA | VF |
| C4J95_RS10525 () | 2293356..2295014 | + | 1659 | WP_124357965.1 | Methyl-accepting chemotaxis protein III | VF |
| C4J95_RS10530 () | 2295050..2295589 | + | 540 | WP_124357966.1 | Chemotaxis protein CheW | VF |
| C4J95_RS10535 () | 2295599..2296408 | + | 810 | WP_124357967.1 | Chemotaxis protein methyltransferase | VF |
| C4J95_RS10540 () | 2296405..2296938 | + | 534 | WP_124357968.1 | Chemoreceptor glutamine deamidase CheD | VF |
| C4J95_RS10545 () | 2296901..2297977 | + | 1077 | WP_124357969.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| C4J95_RS10560 () | 2298623..2299843 | - | 1221 | WP_124360492.1 | alginate lyase family protein | - |
| C4J95_RS10565 () | 2299959..2300771 | - | 813 | WP_124357970.1 | MipA/OmpV family protein | - |
| C4J95_RS10570 () | 2300991..2301680 | + | 690 | WP_124357971.1 | Transcriptional regulatory protein BaeR | VF |
| C4J95_RS10575 () | 2301686..2302867 | + | 1182 | WP_124357972.1 | HAMP domain-containing protein | - |
| C4J95_RS10580 () | 2302965..2303870 | + | 906 | WP_124357973.1 | transcriptional regulator GcvA | - |
| C4J95_RS10585 () | 2303945..2304772 | + | 828 | WP_124357974.1 | DMT family transporter | - |
| C4J95_RS10590 () | 2304802..2305563 | + | 762 | WP_124357975.1 | putative oxidoreductase YgfF | VF |
| C4J95_RS10595 () | 2305734..2306762 | + | 1029 | WP_124357976.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| C4J95_RS10600 () | 2306838..2307806 | + | 969 | WP_057725518.1 | phosphate ABC transporter permease subunit PstC | - |
| C4J95_RS10605 () | 2307803..2308696 | + | 894 | WP_124357977.1 | phosphate ABC transporter permease PstA | - |
| C4J95_RS10610 () | 2308716..2309534 | + | 819 | WP_082632072.1 | phosphate ABC transporter ATP-binding protein | - |
| C4J95_RS10615 () | 2309630..2310328 | + | 699 | WP_124357978.1 | hypothetical protein | - |
| C4J95_RS10620 () | 2310328..2310819 | + | 492 | Protein_2036 | hypothetical protein | - |
| C4J95_RS10625 () | 2311111..2312385 | - | 1275 | WP_124357979.1 | glycoside hydrolase family 68 protein | - |
| C4J95_RS10630 () | 2312575..2313600 | - | 1026 | WP_124357980.1 | UDP-glucose 4-epimerase | VF |
| C4J95_RS10635 () | 2313893..2315062 | + | 1170 | WP_124357981.1 | glycosyltransferase family 1 protein | - |
| C4J95_RS10640 () | 2315050..2316243 | + | 1194 | WP_124357982.1 | UDP-galactopyranose mutase | VF |
| C4J95_RS10645 () | 2316240..2317442 | + | 1203 | WP_124357983.1 | beta-glucosidase | - |
| C4J95_RS10650 () | 2317439..2319199 | + | 1761 | WP_124357984.1 | putative ABC transporter ATP-binding protein | VF |
| C4J95_RS10655 () | 2319254..2319541 | + | 288 | WP_057725507.1 | hypothetical protein | - |
| C4J95_RS10660 () | 2319682..2319864 | - | 183 | WP_003190457.1 | general stress protein | - |
| C4J95_RS10665 () | 2320161..2320391 | + | 231 | WP_124357985.1 | hypothetical protein | - |
| C4J95_RS10670 () | 2320557..2321441 | + | 885 | WP_057725505.1 | manganese catalase family protein | - |
| C4J95_RS10675 () | 2321506..2322015 | + | 510 | WP_057725504.1 | ferritin-like domain-containing protein | - |
| C4J95_RS10680 () | 2322126..2323700 | + | 1575 | WP_206431940.1 | PAS domain-containing protein | - |
| C4J95_RS10690 () | 2324347..2325249 | - | 903 | WP_124357986.1 | heme o synthase | - |
| C4J95_RS10695 () | 2325207..2325545 | - | 339 | WP_124357987.1 | cytochrome o ubiquinol oxidase subunit IV | - |
| C4J95_RS10700 () | 2325547..2326161 | - | 615 | WP_124357988.1 | cytochrome o ubiquinol oxidase subunit III | - |
| C4J95_RS10705 () | 2326165..2328138 | - | 1974 | WP_124357989.1 | cytochrome o ubiquinol oxidase subunit I | - |
| C4J95_RS10710 () | 2328141..2329064 | - | 924 | WP_124357990.1 | ubiquinol oxidase subunit II | - |
| C4J95_RS10715 () | 2329487..2329801 | + | 315 | WP_124357991.1 | hypothetical protein | - |
| C4J95_RS10720 () | 2329999..2331261 | + | 1263 | WP_124360494.1 | APC family permease | - |
| C4J95_RS10725 () | 2331405..2333846 | - | 2442 | WP_124357992.1 | Ferripyoverdine receptor | VF |
| C4J95_RS10730 () | 2333955..2335607 | - | 1653 | WP_124357993.1 | ABC transporter ATP-binding/permease protein YojI | VF |
| C4J95_RS10735 () | 2335806..2336633 | + | 828 | WP_124357994.1 | Phosphoribosylglycinamide formyltransferase | VF |
| C4J95_RS10740 () | 2336873..2337745 | - | 873 | WP_124357995.1 | Serine/threonine-protein kinase pkn1 | VF |
| C4J95_RS10745 () | 2337774..2339042 | - | 1269 | WP_124357996.1 | Isopenicillin N epimerase | VF |
| C4J95_RS10750 () | 2339039..2340400 | - | 1362 | WP_124357997.1 | hypothetical protein | VF |
| C4J95_RS10755 () | 2340543..2342171 | + | 1629 | WP_124357998.1 | hypothetical protein | VF |
| C4J95_RS10760 () | 2342256..2343608 | + | 1353 | WP_124357999.1 | Fic family protein | - |
| C4J95_RS10765 () | 2343669..2343977 | - | 309 | WP_082631966.1 | hypothetical protein | - |
| C4J95_RS10770 () | 2344122..2344844 | - | 723 | WP_124358000.1 | pirin family protein | - |
| C4J95_RS10775 () | 2345027..2345977 | + | 951 | WP_124358001.1 | GlxA family transcriptional regulator | - |
| C4J95_RS10780 () | 2346127..2347578 | + | 1452 | WP_124358002.1 | winged helix-turn-helix domain-containing protein | - |
| C4J95_RS10785 () | 2347525..2350296 | - | 2772 | WP_124358003.1 | Putative HTH-type transcriptional regulator | VF |
| C4J95_RS10790 () | 2350355..2350753 | - | 399 | WP_057722050.1 | HTH-type transcriptional activator Btr | VF |
| C4J95_RS10795 () | 2350958..2351863 | + | 906 | WP_124358004.1 | LysR family transcriptional regulator | - |
| C4J95_RS10800 () | 2352081..2352671 | + | 591 | WP_124358005.1 | antibiotic biosynthesis monooxygenase | - |
| C4J95_RS10805 () | 2352668..2354506 | + | 1839 | WP_124358006.1 | N-substituted formamide deformylase | VF |
| C4J95_RS10810 () | 2354534..2355151 | + | 618 | WP_057722054.1 | hydrolase | - |
| C4J95_RS10815 () | 2355348..2356229 | + | 882 | WP_057722055.1 | HTH-type transcriptional regulator DmlR | VF |
| C4J95_RS10820 () | 2356216..2357253 | - | 1038 | WP_124358007.1 | AraC family transcriptional regulator | - |
| C4J95_RS10825 () | 2357255..2358169 | - | 915 | WP_124358008.1 | GGDEF domain-containing protein | - |
| C4J95_RS10830 () | 2358550..2361063 | + | 2514 | WP_124358009.1 | TonB-dependent receptor | - |
| C4J95_RS10835 () | 2361208..2363067 | + | 1860 | WP_124358010.1 | phytase | - |
| C4J95_RS10840 () | 2363115..2363807 | + | 693 | WP_124358011.1 | protein TolQ | - |
| C4J95_RS10845 () | 2363822..2364268 | + | 447 | WP_124358012.1 | protein TolR | - |
| C4J95_RS10850 () | 2364265..2365023 | + | 759 | WP_124358013.1 | energy transducer TonB | - |
| C4J95_RS10855 () | 2365143..2366090 | - | 948 | WP_124358014.1 | dihydrofolate reductase | - |
| C4J95_RS10860 () | 2366087..2367256 | - | 1170 | WP_124358015.1 | acyl-CoA/acyl-ACP dehydrogenase | - |
| C4J95_RS10865 () | 2367508..2368848 | - | 1341 | WP_124358016.1 | LLM class flavin-dependent oxidoreductase | - |
| C4J95_RS10870 () | 2368859..2369842 | - | 984 | WP_124358017.1 | ABC transporter substrate-binding protein | - |
| C4J95_RS10875 () | 2369926..2371509 | - | 1584 | WP_124358018.1 | rhodanese homology domain-containing protein | - |
| C4J95_RS10880 () | 2371506..2372117 | - | 612 | WP_124358019.1 | cysteine dioxygenase | - |
| C4J95_RS10885 () | 2372330..2373235 | + | 906 | WP_124358020.1 | HTH-type transcriptional regulator GltR | VF |
| C4J95_RS10890 () | 2373528..2374322 | + | 795 | WP_124358021.1 | class II aldolase/adducin family protein | - |
| C4J95_RS10895 () | 2374378..2376435 | - | 2058 | WP_124358022.1 | transketolase | - |
| C4J95_RS10900 () | 2376609..2376833 | + | 225 | WP_065888320.1 | DUF465 domain-containing protein | - |
| C4J95_RS10905 () | 2377041..2378192 | - | 1152 | WP_124358023.1 | N-methyl-L-tryptophan oxidase | - |
| C4J95_RS10910 () | 2378205..2378888 | - | 684 | WP_124358024.1 | hypothetical protein | - |
| C4J95_RS10915 () | 2379111..2379965 | - | 855 | WP_124358025.1 | methyltransferase | - |
| C4J95_RS10920 () | 2379968..2380771 | - | 804 | WP_124358026.1 | NAD(P)-binding domain-containing protein | - |
| C4J95_RS10925 () | 2380935..2382311 | - | 1377 | WP_124358027.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|