MGE detailed information
MGE type: Conjugative plasmid MGE length: 78427 bp
Accession: NZ_CP027576 Location: 1..78427 Organism: Escherichia coli strain 2013C-4081 Replicon: plasmid unnamed3
Accession: NZ_CP027576 Location: 1..78427 Organism: Escherichia coli strain 2013C-4081 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A2F94_RS29985 () | 564..959 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| A2F94_RS29990 () | 992..1351 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| A2F94_RS29995 () | 1366..1677 | + | 312 | WP_000012104.1 | type IV conjugative transfer system protein TraL | - |
| A2F94_RS30000 () | 1699..2265 | + | 567 | WP_000399800.1 | type IV conjugative transfer system protein TraE | - |
| A2F94_RS30005 () | 2276..2980 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| A2F94_RS30010 () | 2980..4407 | + | 1428 | WP_000146670.1 | conjugal transfer protein TraB | - |
| A2F94_RS30015 () | 4397..4987 | + | 591 | WP_000002783.1 | conjugal transfer protein TraP | - |
| A2F94_RS30020 () | 4974..5096 | + | 123 | WP_001369729.1 | DUF2689 domain-containing protein | - |
| A2F94_RS30025 () | 5077..5676 | + | 600 | Protein_9 | conjugal transfer protein TraH | - |
| A2F94_RS30030 () | 5673..6836 | + | 1164 | Protein_10 | conjugal transfer mating pair stabilization protein TraG | - |
| A2F94_RS30040 () | 8144..9811 | + | 1668 | Protein_12 | conjugal transfer protein TraG | - |
| A2F94_RS30045 () | 9808..10317 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| A2F94_RS30050 () | 10331..11062 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| A2F94_RS30055 () | 11315..13468 | + | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| A2F94_RS30060 () | 13468..18738 | + | 5271 | WP_000986985.1 | Multifunctional conjugation protein TraI | Relaxase |
| A2F94_RS30065 () | 18758..19504 | + | 747 | WP_000205714.1 | conjugal transfer pilus acetylase TraX | - |
| A2F94_RS30070 () | 19563..20423 | + | 861 | WP_000704529.1 | putative protein YcjY | VF |
| A2F94_RS30075 () | 20526..21086 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| A2F94_RS30080 () | 21227..21616 | + | 390 | WP_001282151.1 | IS66 family transposase ISEc8 | Transposase |
| A2F94_RS30085 () | 21613..21961 | + | 349 | Protein_21 | IS66 family transposase ISEc8 | Transposase |
| A2F94_RS30090 () | 22011..23549 | + | 1539 | WP_106905012.1 | IS66 family transposase ISEc8 | Transposase |
| A2F94_RS30095 () | 23612..23800 | - | 189 | Protein_23 | hypothetical protein | - |
| A2F94_RS30100 () | 23853..24851 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| A2F94_RS30105 () | 24925..26646 | - | 1722 | WP_000550555.1 | phosphoethanolamine transferase CptA | - |
| A2F94_RS30110 () | 26740..27846 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| A2F94_RS30115 () | 27846..28667 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| A2F94_RS30125 () | 30139..30291 | + | 153 | Protein_28 | IS3 family transposase IS1203 | Transposase |
| A2F94_RS30130 () | 30480..31667 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| A2F94_RS30135 () | 31667..32032 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| A2F94_RS30140 () | 32123..32619 | + | 497 | Protein_31 | IS3 family transposase IS629 | Transposase |
| A2F94_RS30150 () | 33142..33657 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| A2F94_RS30155 () | 33659..36655 | + | 2997 | WP_000217744.1 | Hemolysin, chromosomal | VF |
| A2F94_RS30160 () | 36705..38825 | + | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| A2F94_RS30165 () | 38829..40268 | + | 1440 | WP_001213544.1 | Hemolysin secretion protein D, chromosomal | VF |
| A2F94_RS30170 () | 40395..41048 | - | 654 | Protein_36 | IS3 family transposase ISEc48 | Transposase |
| A2F94_RS30175 () | 41087..42625 | - | 1539 | WP_106905012.1 | IS66 family transposase ISEc8 | Transposase |
| A2F94_RS30180 () | 42675..43023 | - | 349 | Protein_38 | IS66 family transposase ISEc8 | Transposase |
| A2F94_RS30185 () | 43020..43409 | - | 390 | WP_001282151.1 | IS66 family transposase ISEc8 | Transposase |
| A2F94_RS30190 () | 43492..44025 | + | 534 | Protein_40 | IS66 family transposase ISEc8 | Transposase |
| A2F94_RS30195 () | 44143..44355 | + | 213 | WP_001369432.1 | ANR family transcriptional regulator | - |
| A2F94_RS30200 () | 44600..45061 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| A2F94_RS30205 () | 45107..45316 | + | 210 | WP_001369435.1 | hemolysin expression modulator Hha | - |
| A2F94_RS30210 () | 45354..45941 | + | 588 | WP_000766809.1 | DUF2726 domain-containing protein | - |
| A2F94_RS30215 () | 46181..46438 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| A2F94_RS30225 () | 46673..46747 | + | 75 | WP_001365571.1 | RepA leader peptide Tap | - |
| A2F94_RS30230 () | 46740..47597 | + | 858 | WP_000130993.1 | incFII family plasmid replication initiator RepA | - |
| A2F94_RS30245 () | 48300..48560 | + | 261 | WP_001344604.1 | hypothetical protein | - |
| A2F94_RS30250 () | 48573..48812 | + | 240 | WP_000859016.1 | MarR family transcriptional regulator | - |
| A2F94_RS30255 () | 49016..50203 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| A2F94_RS30260 () | 50203..50568 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| A2F94_RS30265 () | 50707..50961 | - | 255 | WP_000997720.1 | hypothetical protein | - |
| A2F94_RS30275 () | 51468..55433 | - | 3966 | WP_001034091.1 | Serine protease EspP | VF |
| A2F94_RS30290 () | 57019..57948 | + | 930 | Protein_55 | Catalase-peroxidase | VF |
| A2F94_RS30295 () | 57992..58381 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| A2F94_RS30300 () | 58495..59261 | + | 767 | Protein_57 | IS3 family transposase | - |
| A2F94_RS30305 () | 59341..59736 | - | 396 | WP_000445936.1 | plasmid partitioning/stability family protein | - |
| A2F94_RS30310 () | 59736..60695 | - | 960 | WP_000921961.1 | plasmid segregation protein ParM | - |
| A2F94_RS30315 () | 60968..61870 | + | 903 | WP_077629034.1 | DUF1281 domain-containing protein | - |
| A2F94_RS30320 () | 61867..62179 | + | 313 | Protein_61 | hypothetical protein | - |
| A2F94_RS30325 () | 62255..62626 | + | 372 | WP_000086162.1 | restriction endonuclease subunit M | - |
| A2F94_RS30330 () | 62733..63920 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| A2F94_RS30335 () | 63920..64285 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| A2F94_RS30350 () | 64658..64960 | + | 303 | WP_072106536.1 | antirestriction protein | - |
| A2F94_RS30355 () | 65007..65429 | + | 423 | WP_000271680.1 | DUF1380 family protein | - |
| A2F94_RS30360 () | 65426..65617 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| A2F94_RS30950 () | 65893..66117 | - | 225 | WP_013279293.1 | hypothetical protein | - |
| A2F94_RS30375 () | 66655..66885 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| A2F94_RS30380 () | 66937..68298 | + | 1362 | WP_000170683.1 | DUF3560 domain-containing protein | - |
| A2F94_RS30385 () | 68345..68907 | + | 563 | Protein_71 | class I SAM-dependent methyltransferase | - |
| A2F94_RS30400 () | 69217..69441 | - | 225 | WP_106905013.1 | hypothetical protein | - |
| A2F94_RS30415 () | 69786..70313 | + | 528 | WP_000290792.1 | single-stranded DNA-binding protein | - |
| A2F94_RS30420 () | 70369..70602 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| A2F94_RS30425 () | 70661..72619 | + | 1959 | WP_001145472.1 | ParB/RepB/Spo0J family partition protein | - |
| A2F94_RS30430 () | 72674..73108 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| A2F94_RS30435 () | 73105..73824 | + | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| A2F94_RS30955 () | 73836..74024 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 73836..74060 | + | 225 | NuclAT_0 | - | - |
| - () | 73836..74060 | + | 225 | NuclAT_0 | - | - |
| - () | 73836..74060 | + | 225 | NuclAT_0 | - | - |
| - () | 73836..74060 | + | 225 | NuclAT_0 | - | - |
| - () | 73993..74058 | + | 66 | - | - | Antitoxin Detail |
| A2F94_RS30440 () | 74104..74262 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| A2F94_RS31170 () | 74616..74840 | - | 225 | WP_001427866.1 | hypothetical protein | - |
| A2F94_RS30460 () | 75184..75471 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| A2F94_RS30465 () | 75592..76413 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| A2F94_RS30470 () | 76710..77219 | - | 510 | Protein_83 | transglycosylase SLT domain-containing protein | - |
| A2F94_RS30475 () | 77633..78016 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|