MGE detailed information
MGE type: Prophage MGE length: 49183 bp
Accession: NZ_CP027462 Location: 2126982..2176164 Organism: Escherichia coli isolate 07-4299 Replicon: chromosome
Accession: NZ_CP027462 Location: 2126982..2176164 Organism: Escherichia coli isolate 07-4299 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W75_RS10985 () | 2122363..2123073 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| C6W75_RS10990 () | 2123076..2123636 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| C6W75_RS10995 () | 2123671..2124012 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| C6W75_RS11000 () | 2124147..2124473 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| C6W75_RS11010 () | 2124679..2125893 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| C6W75_RS11015 () | 2125905..2126924 | + | 1020 | WP_000836057.1 | Zn-dependent oxidoreductase | - |
| C6W75_RS11025 () | 2127112..2128392 | - | 1281 | WP_000876986.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C6W75_RS11030 () | 2128427..2128678 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C6W75_RS11035 () | 2128751..2131222 | - | 2472 | WP_021511903.1 | exonuclease | - |
| C6W75_RS11040 () | 2131316..2131507 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| C6W75_RS11045 () | 2131504..2131692 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| C6W75_RS11055 () | 2132260..2132478 | - | 219 | WP_001171925.1 | hypothetical protein | - |
| C6W75_RS11065 () | 2132638..2132793 | - | 156 | WP_000379578.1 | DUF1391 family protein | - |
| C6W75_RS11070 () | 2132962..2133369 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| C6W75_RS11075 () | 2133450..2133677 | + | 228 | WP_000921596.1 | transcriptional regulator | - |
| C6W75_RS11080 () | 2133661..2134182 | + | 522 | WP_000705355.1 | hypothetical protein | - |
| C6W75_RS11085 () | 2134163..2135128 | + | 966 | WP_000054509.1 | hypothetical protein | - |
| C6W75_RS11090 () | 2135169..2135591 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| C6W75_RS11095 () | 2135588..2135944 | + | 357 | WP_001374839.1 | class I SAM-dependent methyltransferase | - |
| C6W75_RS26050 () | 2136555..2136842 | + | 288 | Protein_2037 | hypothetical protein | - |
| C6W75_RS11110 () | 2137611..2138952 | + | 1342 | Protein_2038 | ISNCY family transposase ISCARN112 | Transposase |
| C6W75_RS11120 () | 2139389..2139721 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| C6W75_RS11125 () | 2139924..2140229 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| C6W75_RS11130 () | 2140254..2140493 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C6W75_RS11135 () | 2140493..2140780 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C6W75_RS11140 () | 2140852..2141007 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C6W75_RS11145 () | 2141224..2141475 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| C6W75_RS11150 () | 2141542..2141820 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| C6W75_RS11155 () | 2141822..2142871 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| C6W75_RS11160 () | 2142885..2143637 | + | 753 | WP_001047135.1 | antitermination protein | - |
| C6W75_RS25835 () | 2143915..2144004 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| C6W75_RS11165 () | 2144059..2144271 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| C6W75_RS11170 () | 2144572..2144787 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| C6W75_RS26210 () | 2145151..2145321 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| C6W75_RS11175 () | 2145541..2145756 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| C6W75_RS11180 () | 2145761..2146072 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| C6W75_RS11185 () | 2146069..2146602 | + | 534 | WP_001092971.1 | lysozyme | - |
| C6W75_RS11190 () | 2146599..2147096 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| C6W75_RS11195 () | 2147459..2147671 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| C6W75_RS11200 () | 2147682..2147870 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| C6W75_RS25840 () | 2147873..2147938 | + | 66 | WP_122134696.1 | hypothetical protein | - |
| C6W75_RS25845 () | 2148018..2148173 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| C6W75_RS11210 () | 2148345..2148518 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| C6W75_RS11215 () | 2148670..2149080 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| C6W75_RS11220 () | 2149138..2149371 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| C6W75_RS11230 () | 2149760..2150305 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| C6W75_RS11235 () | 2150280..2152205 | + | 1926 | Protein_2064 | phage terminase large subunit family protein | - |
| C6W75_RS11240 () | 2152202..2152408 | + | 207 | WP_000198149.1 | gpW family protein | - |
| C6W75_RS11245 () | 2152405..2154006 | + | 1602 | WP_046464165.1 | phage portal protein | - |
| C6W75_RS11250 () | 2153987..2155306 | + | 1320 | WP_000123309.1 | S49 family peptidase | - |
| C6W75_RS11255 () | 2155316..2155648 | + | 333 | WP_001338090.1 | head decoration protein | - |
| C6W75_RS11260 () | 2155704..2156729 | + | 1026 | WP_021514934.1 | major capsid protein | - |
| C6W75_RS11265 () | 2156771..2157166 | + | 396 | WP_106912512.1 | DNA-packaging protein FI | - |
| C6W75_RS11270 () | 2157178..2157531 | + | 354 | WP_000785282.1 | head-tail joining protein | - |
| C6W75_RS11275 () | 2157543..2158121 | + | 579 | WP_106912513.1 | phage tail protein | - |
| C6W75_RS11280 () | 2158118..2158513 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| C6W75_RS11285 () | 2158521..2159261 | + | 741 | WP_001547245.1 | phage tail protein | - |
| C6W75_RS11290 () | 2159277..2159699 | + | 423 | WP_001468358.1 | phage minor tail protein G | - |
| C6W75_RS11295 () | 2159681..2160115 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| C6W75_RS11300 () | 2160108..2162687 | + | 2580 | WP_106912514.1 | phage tail tape measure protein | - |
| C6W75_RS11305 () | 2162684..2163013 | + | 330 | WP_000847331.1 | phage tail protein | - |
| C6W75_RS11310 () | 2163013..2163711 | + | 699 | WP_001152624.1 | phage minor tail protein L | - |
| C6W75_RS11315 () | 2163717..2164460 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| C6W75_RS11320 () | 2164397..2165029 | + | 633 | WP_122999725.1 | tail assembly protein | - |
| C6W75_RS11325 () | 2165090..2168587 | + | 3498 | WP_106912515.1 | host specificity protein J | - |
| C6W75_RS11330 () | 2168658..2169257 | + | 600 | WP_001233090.1 | hypothetical protein | VF |
| C6W75_RS11335 () | 2169322..2172282 | + | 2961 | WP_024190505.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C6W75_RS11340 () | 2172282..2172857 | + | 576 | WP_000885616.1 | tail fiber assembly protein | - |
| C6W75_RS11345 () | 2172955..2173545 | - | 591 | WP_000086514.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| C6W75_RS11350 () | 2173862..2174095 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| C6W75_RS25850 () | 2174164..2174277 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| C6W75_RS11355 () | 2174881..2176164 | + | 1284 | Protein_2089 | MHS family MFS transporter YdfJ | - |
| C6W75_RS11360 () | 2176253..2177713 | + | 1461 | WP_000527751.1 | mannitol dehydrogenase family protein | - |
| C6W75_RS11365 () | 2177749..2177952 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C6W75_RS11370 () | 2178130..2178816 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C6W75_RS11375 () | 2178905..2179651 | - | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|